Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-659P-201ENST00000516454 104 ntBASIC0.12□□□□□ -2.39
HMGCS2P54868 MTND5P40-201ENST00000559945 246 ntBASIC0.12□□□□□ -2.39
HMGCS2P54868 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.12□□□□□ -2.39
HMGCS2P54868 AL035470.1-201ENST00000622571 220 ntBASIC0.12□□□□□ -2.39
HMGCS2P54868 SNORA9.1-201ENST00000362412 131 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 Y_RNA.71-201ENST00000362892 104 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 Y_RNA.155-201ENST00000363632 101 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 Y_RNA.173-201ENST00000363776 113 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 RNA5SP128-201ENST00000365305 116 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 SNORA2A-201ENST00000383885 135 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 Y_RNA.549-201ENST00000384657 102 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 MIR548L-201ENST00000408303 86 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 MIR548G-201ENST00000408442 89 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 RPL39P34-201ENST00000477141 156 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 MIR4679-2-201ENST00000578358 77 ntBASIC0.11□□□□□ -2.39
HMGCS2P54868 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGCS2P54868 RNU6-704P-201ENST00000364162 103 ntBASIC0.1□□□□□ -2.39
HMGCS2P54868 Y_RNA.507-201ENST00000384500 99 ntBASIC0.1□□□□□ -2.39
HMGCS2P54868 RNU6-127P-201ENST00000390897 107 ntBASIC0.1□□□□□ -2.39
HMGCS2P54868 RNA5SP285-201ENST00000516619 119 ntBASIC0.1□□□□□ -2.39
HMGCS2P54868 uc_338.28-201ENST00000612082 187 ntBASIC0.1□□□□□ -2.39
HMGCS2P54868 AL442128.1-201ENST00000615151 90 ntBASIC0.1□□□□□ -2.39
HMGCS2P54868 SNORD36A-201ENST00000362874 73 ntBASIC0.09□□□□□ -2.4
HMGCS2P54868 SNORA42.1-201ENST00000363515 137 ntBASIC0.09□□□□□ -2.4
HMGCS2P54868 SPINT5P-201ENST00000448174 155 ntBASIC0.09□□□□□ -2.4
HMGCS2P54868 AC007012.1-201ENST00000567192 175 ntBASIC0.09□□□□□ -2.4
HMGCS2P54868 MIR548AG2-201ENST00000581228 64 ntBASIC0.09□□□□□ -2.4
HMGCS2P54868 RNU6-90P-201ENST00000606352 106 ntBASIC0.09□□□□□ -2.4
HMGCS2P54868 MIR499B-201ENST00000636498 73 ntBASIC0.09□□□□□ -2.4
HMGCS2P54868 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 SNORD114-9-201ENST00000364370 72 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 MIR501-201ENST00000390204 84 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 RNU6-1254P-201ENST00000391266 104 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 MIR548H2-201ENST00000408874 88 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 MIR1912-201ENST00000410389 80 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 Y_RNA.649-201ENST00000459077 103 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 SNORD33.1-201ENST00000516213 88 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 MIR5706-201ENST00000579841 80 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
HMGCS2P54868 Y_RNA.377-201ENST00000365644 108 ntBASIC0.07□□□□□ -2.4
HMGCS2P54868 MIR577-201ENST00000385196 96 ntBASIC0.07□□□□□ -2.4
HMGCS2P54868 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.07□□□□□ -2.4
HMGCS2P54868 RNU7-13P-201ENST00000516413 62 ntBASIC0.07□□□□□ -2.4
HMGCS2P54868 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
HMGCS2P54868 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
HMGCS2P54868 Y_RNA.57-201ENST00000362806 113 ntBASIC0.06□□□□□ -2.4
HMGCS2P54868 Y_RNA.309-201ENST00000365046 111 ntBASIC0.06□□□□□ -2.4
HMGCS2P54868 MIR548A1-201ENST00000385041 97 ntBASIC0.06□□□□□ -2.4
HMGCS2P54868 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.06□□□□□ -2.4
HMGCS2P54868 RNA5SP484-201ENST00000458857 111 ntBASIC0.06□□□□□ -2.4
HMGCS2P54868 RNU7-129P-201ENST00000516128 62 ntBASIC0.06□□□□□ -2.4
HMGCS2P54868 MIR548AD-201ENST00000584780 82 ntBASIC0.06□□□□□ -2.4
HMGCS2P54868 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
HMGCS2P54868 AC073869.9-201ENST00000641610 120 ntBASIC0.06□□□□□ -2.4
HMGCS2P54868 RNU6-1163P-201ENST00000364516 107 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 Y_RNA.353-201ENST00000365440 108 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 SNORD116-14-201ENST00000383894 92 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 SNORD116-17-201ENST00000383929 92 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 SNORD116-15-201ENST00000384445 92 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 SNORD116-19-201ENST00000384729 92 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 AL161932.1-201ENST00000437408 146 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 RNU6-782P-201ENST00000516852 104 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 AC068339.1-201ENST00000526965 141 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 MIR3613-201ENST00000579844 87 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 U6.95-201ENST00000636931 70 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 MIR6759-201ENST00000638110 65 ntBASIC0.05□□□□□ -2.4
HMGCS2P54868 RNU6-161P-201ENST00000363051 106 ntBASIC0.04□□□□□ -2.4
HMGCS2P54868 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
HMGCS2P54868 RNU6-243P-201ENST00000391140 107 ntBASIC0.04□□□□□ -2.4
HMGCS2P54868 HMGN2P22-201ENST00000427588 175 ntBASIC0.04□□□□□ -2.4
HMGCS2P54868 RNA5SP395-201ENST00000516567 118 ntBASIC0.04□□□□□ -2.4
HMGCS2P54868 NAMPTP3-201ENST00000569273 224 ntBASIC0.04□□□□□ -2.4
HMGCS2P54868 MIR4694-201ENST00000578534 80 ntBASIC0.04□□□□□ -2.4
HMGCS2P54868 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
HMGCS2P54868 RNU6-509P-201ENST00000363519 107 ntBASIC0.03□□□□□ -2.4
HMGCS2P54868 MIR329-2-201ENST00000385029 84 ntBASIC0.03□□□□□ -2.4
HMGCS2P54868 MIR519E-201ENST00000385075 84 ntBASIC0.03□□□□□ -2.4
HMGCS2P54868 AC093423.1-201ENST00000440817 142 ntBASIC0.03□□□□□ -2.4
HMGCS2P54868 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
HMGCS2P54868 TRDV1-202ENST00000621643 102 ntBASIC0.03□□□□□ -2.4
HMGCS2P54868 RNU6-832P-201ENST00000363319 107 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 RNU1-141P-201ENST00000364623 158 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 U8.6-201ENST00000364939 135 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 RNU6-959P-201ENST00000384671 107 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 Y_RNA.563-201ENST00000384707 108 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 MIR617-201ENST00000385030 97 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 MIR548A3-201ENST00000385297 97 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 SNORD110-201ENST00000408189 75 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 MIR5009-201ENST00000578736 100 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 MIR4677-201ENST00000584153 80 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 MTRNR2L2-201ENST00000604882 87 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 U6.100-201ENST00000636230 99 ntBASIC0.02□□□□□ -2.41
HMGCS2P54868 RNY3P2-201ENST00000362918 102 ntBASIC0.01□□□□□ -2.41
HMGCS2P54868 RNU6-957P-201ENST00000363652 99 ntBASIC0.01□□□□□ -2.41
HMGCS2P54868 SNORD115-44-201ENST00000365391 82 ntBASIC0.01□□□□□ -2.41
HMGCS2P54868 RNU6-81P-201ENST00000365608 104 ntBASIC0.01□□□□□ -2.41
HMGCS2P54868 RNU6-35P-201ENST00000384530 107 ntBASIC0.01□□□□□ -2.41
HMGCS2P54868 AC006210.1-201ENST00000424882 111 ntBASIC0.01□□□□□ -2.41
HMGCS2P54868 RNU6-1333P-201ENST00000516162 93 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 235.9 ms