Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 AC023827.1-201ENST00000569247 97 ntBASIC0.99□□□□□ -2.25
TTC3P53804 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TTC3P53804 Y_RNA.36-201ENST00000362602 112 ntBASIC0.99□□□□□ -2.25
TTC3P53804 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
TTC3P53804 RNU7-85P-201ENST00000458851 63 ntBASIC0.99□□□□□ -2.25
TTC3P53804 SNORA70.22-201ENST00000517160 124 ntBASIC0.99□□□□□ -2.25
TTC3P53804 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.99□□□□□ -2.25
TTC3P53804 RNU6-633P-201ENST00000362612 103 ntBASIC0.98□□□□□ -2.25
TTC3P53804 Y_RNA.73-201ENST00000362910 113 ntBASIC0.98□□□□□ -2.25
TTC3P53804 RNU6-1260P-201ENST00000362944 107 ntBASIC0.98□□□□□ -2.25
TTC3P53804 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TTC3P53804 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.98□□□□□ -2.25
TTC3P53804 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.98□□□□□ -2.25
TTC3P53804 AC036111.3-201ENST00000526389 112 ntBASIC0.98□□□□□ -2.25
TTC3P53804 RNU6-228P-201ENST00000362700 106 ntBASIC0.98□□□□□ -2.25
TTC3P53804 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
TTC3P53804 MIR520H-201ENST00000385126 88 ntBASIC0.98□□□□□ -2.25
TTC3P53804 RNU1-119P-201ENST00000391122 165 ntBASIC0.98□□□□□ -2.25
TTC3P53804 RNU6-994P-201ENST00000410507 111 ntBASIC0.98□□□□□ -2.25
TTC3P53804 RN7SKP12-201ENST00000516275 143 ntBASIC0.98□□□□□ -2.25
TTC3P53804 SNORA31.14-201ENST00000516728 116 ntBASIC0.98□□□□□ -2.25
TTC3P53804 MIR548Z-201ENST00000584743 97 ntBASIC0.98□□□□□ -2.25
TTC3P53804 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
TTC3P53804 MIR494-201ENST00000349529 81 ntBASIC0.97□□□□□ -2.25
TTC3P53804 Y_RNA.173-201ENST00000363776 113 ntBASIC0.97□□□□□ -2.25
TTC3P53804 Y_RNA.313-201ENST00000365095 103 ntBASIC0.97□□□□□ -2.25
TTC3P53804 SNORA72.6-201ENST00000384520 129 ntBASIC0.97□□□□□ -2.25
TTC3P53804 MIRLET7F1-201ENST00000362202 87 ntBASIC0.96□□□□□ -2.26
TTC3P53804 RNU6-957P-201ENST00000363652 99 ntBASIC0.96□□□□□ -2.26
TTC3P53804 RNY1P4-201ENST00000384595 115 ntBASIC0.96□□□□□ -2.26
TTC3P53804 SNORD99-201ENST00000408612 74 ntBASIC0.96□□□□□ -2.26
TTC3P53804 SNORD63B-201ENST00000411005 70 ntBASIC0.96□□□□□ -2.26
TTC3P53804 AP003327.1-201ENST00000529684 127 ntBASIC0.96□□□□□ -2.26
TTC3P53804 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.96□□□□□ -2.26
TTC3P53804 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
TTC3P53804 RNU6-519P-201ENST00000410590 108 ntBASIC0.96□□□□□ -2.26
TTC3P53804 AC140658.3-201ENST00000567603 271 ntBASIC0.96□□□□□ -2.26
TTC3P53804 MIR1-1-201ENST00000362147 71 ntBASIC0.95□□□□□ -2.26
TTC3P53804 Y_RNA.56-201ENST00000362798 112 ntBASIC0.95□□□□□ -2.26
TTC3P53804 RNU6-1276P-201ENST00000365372 104 ntBASIC0.95□□□□□ -2.26
TTC3P53804 MIR1827-201ENST00000408549 66 ntBASIC0.95□□□□□ -2.26
TTC3P53804 Y_RNA.596-201ENST00000410462 109 ntBASIC0.95□□□□□ -2.26
TTC3P53804 Y_RNA.609-201ENST00000410669 89 ntBASIC0.95□□□□□ -2.26
TTC3P53804 AC097635.1-201ENST00000450678 155 ntBASIC0.95□□□□□ -2.26
TTC3P53804 snoU13.11-201ENST00000459219 104 ntBASIC0.95□□□□□ -2.26
TTC3P53804 Y_RNA.648-201ENST00000459455 110 ntBASIC0.95□□□□□ -2.26
TTC3P53804 RNA5SP436-201ENST00000516020 115 ntBASIC0.95□□□□□ -2.26
TTC3P53804 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
TTC3P53804 MIR4668-201ENST00000582284 70 ntBASIC0.95□□□□□ -2.26
TTC3P53804 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.95□□□□□ -2.26
TTC3P53804 Y_RNA.13-201ENST00000362403 112 ntBASIC0.94□□□□□ -2.26
TTC3P53804 RNU6-219P-201ENST00000364728 107 ntBASIC0.94□□□□□ -2.26
TTC3P53804 RNU6-787P-201ENST00000384032 107 ntBASIC0.94□□□□□ -2.26
TTC3P53804 U7.7-201ENST00000459276 60 ntBASIC0.94□□□□□ -2.26
TTC3P53804 AC002350.1-201ENST00000490759 375 ntBASIC0.94□□□□□ -2.26
TTC3P53804 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.94□□□□□ -2.26
TTC3P53804 RNU6-497P-201ENST00000365316 104 ntBASIC0.94□□□□□ -2.26
TTC3P53804 RNA5SP255-201ENST00000516370 107 ntBASIC0.94□□□□□ -2.26
TTC3P53804 RNU6-573P-201ENST00000383938 106 ntBASIC0.93□□□□□ -2.26
TTC3P53804 AC015818.7-201ENST00000428754 109 ntBASIC0.93□□□□□ -2.26
TTC3P53804 RNU6-65P-201ENST00000516332 98 ntBASIC0.93□□□□□ -2.26
TTC3P53804 MIR4666B-201ENST00000578142 81 ntBASIC0.93□□□□□ -2.26
TTC3P53804 uc_338.16-201ENST00000621804 95 ntBASIC0.93□□□□□ -2.26
TTC3P53804 MIR3202-2-201ENST00000635980 79 ntBASIC0.93□□□□□ -2.26
TTC3P53804 SNORD105-201ENST00000386910 85 ntBASIC0.93□□□□□ -2.26
TTC3P53804 MIR938-201ENST00000401216 83 ntBASIC0.93□□□□□ -2.26
TTC3P53804 Y_RNA.685-201ENST00000516532 108 ntBASIC0.93□□□□□ -2.26
TTC3P53804 RNA5SP395-201ENST00000516567 118 ntBASIC0.93□□□□□ -2.26
TTC3P53804 Y_RNA.174-201ENST00000363781 105 ntBASIC0.92□□□□□ -2.26
TTC3P53804 Y_RNA.205-201ENST00000364128 113 ntBASIC0.92□□□□□ -2.26
TTC3P53804 RNU6-279P-201ENST00000391297 101 ntBASIC0.92□□□□□ -2.26
TTC3P53804 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
TTC3P53804 RNU7-195P-201ENST00000458793 62 ntBASIC0.92□□□□□ -2.26
TTC3P53804 RNU7-106P-201ENST00000459514 67 ntBASIC0.92□□□□□ -2.26
TTC3P53804 IGLL4P-201ENST00000614590 133 ntBASIC0.92□□□□□ -2.26
TTC3P53804 Y_RNA.437-201ENST00000384113 113 ntBASIC0.91□□□□□ -2.26
TTC3P53804 AC008608.1-201ENST00000603910 127 ntBASIC0.91□□□□□ -2.26
TTC3P53804 U6.100-201ENST00000636230 99 ntBASIC0.91□□□□□ -2.26
TTC3P53804 MIR519A1-201ENST00000385257 85 ntBASIC0.91□□□□□ -2.26
TTC3P53804 SNORD12-201ENST00000391002 90 ntBASIC0.91□□□□□ -2.26
TTC3P53804 MIR1236-201ENST00000408340 102 ntBASIC0.91□□□□□ -2.26
TTC3P53804 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.91□□□□□ -2.26
TTC3P53804 MIR1245B-201ENST00000636115 69 ntBASIC0.91□□□□□ -2.26
TTC3P53804 RNU6-132P-201ENST00000383863 107 ntBASIC0.9□□□□□ -2.27
TTC3P53804 MIR618-201ENST00000385287 98 ntBASIC0.9□□□□□ -2.27
TTC3P53804 RNA5SP292-201ENST00000390974 118 ntBASIC0.9□□□□□ -2.27
TTC3P53804 FABP5P4-201ENST00000437203 171 ntBASIC0.9□□□□□ -2.27
TTC3P53804 Y_RNA.239-201ENST00000364444 113 ntBASIC0.89□□□□□ -2.27
TTC3P53804 RNU6-652P-201ENST00000365488 107 ntBASIC0.89□□□□□ -2.27
TTC3P53804 MIR548U-201ENST00000390728 81 ntBASIC0.89□□□□□ -2.27
TTC3P53804 MIR5588-201ENST00000581890 63 ntBASIC0.89□□□□□ -2.27
TTC3P53804 Y_RNA.491-201ENST00000384417 107 ntBASIC0.89□□□□□ -2.27
TTC3P53804 MIR617-201ENST00000385030 97 ntBASIC0.89□□□□□ -2.27
TTC3P53804 SNORD78.1-201ENST00000390866 65 ntBASIC0.89□□□□□ -2.27
TTC3P53804 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.89□□□□□ -2.27
TTC3P53804 RNU7-161P-201ENST00000517289 62 ntBASIC0.89□□□□□ -2.27
TTC3P53804 RNU4-32P-201ENST00000363404 141 ntBASIC0.88□□□□□ -2.27
TTC3P53804 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
TTC3P53804 RNA5SP325-201ENST00000363756 130 ntBASIC0.88□□□□□ -2.27
TTC3P53804 RNY4P3-201ENST00000365254 95 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms