Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNA5SP200-201ENST00000516360 103 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 RNU6-752P-201ENST00000516376 102 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 RNU6-977P-201ENST00000516411 103 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 RNU7-13P-201ENST00000516413 62 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 MIR1273D-201ENST00000577266 86 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
RNF144AP50876 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RNF144AP50876 Y_RNA.258-201ENST00000364613 105 ntBASIC1.93□□□□□ -2.1
RNF144AP50876 Y_RNA.363-201ENST00000365529 113 ntBASIC1.93□□□□□ -2.1
RNF144AP50876 SNORD116-24-201ENST00000384549 92 ntBASIC1.93□□□□□ -2.1
RNF144AP50876 MIR934-201ENST00000401241 83 ntBASIC1.93□□□□□ -2.1
RNF144AP50876 RNU6-717P-201ENST00000459076 104 ntBASIC1.93□□□□□ -2.1
RNF144AP50876 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RNF144AP50876 RNU1-119P-201ENST00000391122 165 ntBASIC1.92□□□□□ -2.1
RNF144AP50876 AL691482.2-201ENST00000457453 84 ntBASIC1.92□□□□□ -2.1
RNF144AP50876 MIR4804-201ENST00000581683 73 ntBASIC1.92□□□□□ -2.1
RNF144AP50876 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
RNF144AP50876 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.92□□□□□ -2.1
RNF144AP50876 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RNF144AP50876 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
RNF144AP50876 RN7SKP223-201ENST00000410582 62 ntBASIC1.91□□□□□ -2.1
RNF144AP50876 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RNF144AP50876 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
RNF144AP50876 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RNF144AP50876 MIR100-201ENST00000385259 80 ntBASIC1.9□□□□□ -2.11
RNF144AP50876 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
RNF144AP50876 RNU7-56P-201ENST00000458744 62 ntBASIC1.9□□□□□ -2.11
RNF144AP50876 RNU7-21P-201ENST00000459430 62 ntBASIC1.9□□□□□ -2.11
RNF144AP50876 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
RNF144AP50876 AL157834.3-201ENST00000615543 103 ntBASIC1.9□□□□□ -2.11
RNF144AP50876 AC103706.3-201ENST00000636297 85 ntBASIC1.9□□□□□ -2.11
RNF144AP50876 SNORD115-24-201ENST00000363528 82 ntBASIC1.89□□□□□ -2.11
RNF144AP50876 RNU6-499P-201ENST00000365615 107 ntBASIC1.89□□□□□ -2.11
RNF144AP50876 SNORA80D-201ENST00000384488 135 ntBASIC1.89□□□□□ -2.11
RNF144AP50876 RNU6-987P-201ENST00000384759 104 ntBASIC1.89□□□□□ -2.11
RNF144AP50876 RPL23AP42-201ENST00000471152 471 ntBASIC1.89□□□□□ -2.11
RNF144AP50876 MIR4648-201ENST00000580107 72 ntBASIC1.89□□□□□ -2.11
RNF144AP50876 MIR4511-201ENST00000582784 87 ntBASIC1.89□□□□□ -2.11
RNF144AP50876 MIR1-1-201ENST00000362147 71 ntBASIC1.88□□□□□ -2.11
RNF144AP50876 RNU6-369P-201ENST00000362515 102 ntBASIC1.88□□□□□ -2.11
RNF144AP50876 RNU1-78P-201ENST00000391248 165 ntBASIC1.88□□□□□ -2.11
RNF144AP50876 RNU4-37P-201ENST00000410214 84 ntBASIC1.88□□□□□ -2.11
RNF144AP50876 SNORA31.14-201ENST00000516728 116 ntBASIC1.88□□□□□ -2.11
RNF144AP50876 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
RNF144AP50876 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF144AP50876 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF144AP50876 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RNF144AP50876 RNU6-910P-201ENST00000390844 107 ntBASIC1.87□□□□□ -2.11
RNF144AP50876 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
RNF144AP50876 RNU7-90P-201ENST00000459216 62 ntBASIC1.87□□□□□ -2.11
RNF144AP50876 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
RNF144AP50876 Y_RNA.32-201ENST00000362589 110 ntBASIC1.86□□□□□ -2.11
RNF144AP50876 RNU6-1126P-201ENST00000384002 107 ntBASIC1.86□□□□□ -2.11
RNF144AP50876 MIR520F-201ENST00000384824 87 ntBASIC1.86□□□□□ -2.11
RNF144AP50876 MIR216B-201ENST00000390186 82 ntBASIC1.86□□□□□ -2.11
RNF144AP50876 SNORD75.2-201ENST00000408784 58 ntBASIC1.86□□□□□ -2.11
RNF144AP50876 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
RNF144AP50876 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.86□□□□□ -2.11
RNF144AP50876 uc_338.16-201ENST00000621804 95 ntBASIC1.86□□□□□ -2.11
RNF144AP50876 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RNF144AP50876 Y_RNA.174-201ENST00000363781 105 ntBASIC1.85□□□□□ -2.11
RNF144AP50876 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
RNF144AP50876 MIR548AG2-201ENST00000581228 64 ntBASIC1.85□□□□□ -2.11
RNF144AP50876 MIR3920-201ENST00000581751 86 ntBASIC1.85□□□□□ -2.11
RNF144AP50876 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
RNF144AP50876 AL359821.1-201ENST00000605519 182 ntBASIC1.85□□□□□ -2.11
RNF144AP50876 AC069503.3-201ENST00000618674 145 ntBASIC1.85□□□□□ -2.11
RNF144AP50876 RNA5SP403-201ENST00000363598 108 ntBASIC1.84□□□□□ -2.11
RNF144AP50876 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.84□□□□□ -2.11
RNF144AP50876 MIR1261-201ENST00000408659 82 ntBASIC1.84□□□□□ -2.11
RNF144AP50876 RNU6-982P-201ENST00000516216 102 ntBASIC1.84□□□□□ -2.11
RNF144AP50876 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
RNF144AP50876 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
RNF144AP50876 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RNF144AP50876 RNU6-495P-201ENST00000362995 107 ntBASIC1.83□□□□□ -2.12
RNF144AP50876 AC003989.2-201ENST00000440224 169 ntBASIC1.83□□□□□ -2.12
RNF144AP50876 RNU7-24P-201ENST00000458867 62 ntBASIC1.83□□□□□ -2.12
RNF144AP50876 RNU7-104P-201ENST00000459398 79 ntBASIC1.83□□□□□ -2.12
RNF144AP50876 RNU7-161P-201ENST00000517289 62 ntBASIC1.83□□□□□ -2.12
RNF144AP50876 AC104984.5-201ENST00000586878 94 ntBASIC1.83□□□□□ -2.12
RNF144AP50876 MIR6509-201ENST00000614603 85 ntBASIC1.83□□□□□ -2.12
RNF144AP50876 RNU6-1039P-201ENST00000383931 107 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 MIR617-201ENST00000385030 97 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 SNORA40.6-201ENST00000391153 128 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 MTND4LP1-201ENST00000446263 157 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 AC067940.1-201ENST00000458411 300 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 SNORD79.1-201ENST00000516069 84 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 NAMPTP3-201ENST00000569273 224 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 MIR3124-201ENST00000582636 67 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 AL109933.3-201ENST00000619095 188 ntBASIC1.82□□□□□ -2.12
RNF144AP50876 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RNF144AP50876 MIR203A-201ENST00000384836 110 ntBASIC1.81□□□□□ -2.12
RNF144AP50876 snoU13.15-201ENST00000459407 104 ntBASIC1.81□□□□□ -2.12
RNF144AP50876 AC110620.1-201ENST00000416042 228 ntBASIC1.8□□□□□ -2.12
RNF144AP50876 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RNF144AP50876 RNU6-668P-201ENST00000364180 107 ntBASIC1.79□□□□□ -2.12
RNF144AP50876 RNU6-1187P-201ENST00000364771 110 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 768.5 ms