Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6-1254P-201ENST00000391266 104 ntBASIC0.6□□□□□ -2.31
CLK1P49759 U7.3-201ENST00000616123 62 ntBASIC0.6□□□□□ -2.31
CLK1P49759 MALAT1.1-201ENST00000618249 95 ntBASIC0.6□□□□□ -2.31
CLK1P49759 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
CLK1P49759 MIR599-201ENST00000385069 95 ntBASIC0.59□□□□□ -2.31
CLK1P49759 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CLK1P49759 Y_RNA.809-201ENST00000516058 95 ntBASIC0.59□□□□□ -2.31
CLK1P49759 RNU6-162P-201ENST00000516228 103 ntBASIC0.59□□□□□ -2.31
CLK1P49759 RNU6-1265P-201ENST00000516342 103 ntBASIC0.59□□□□□ -2.31
CLK1P49759 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.59□□□□□ -2.31
CLK1P49759 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.59□□□□□ -2.31
CLK1P49759 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.59□□□□□ -2.31
CLK1P49759 MIR2052-201ENST00000636055 55 ntBASIC0.59□□□□□ -2.31
CLK1P49759 Y_RNA.96-201ENST00000363092 109 ntBASIC0.58□□□□□ -2.32
CLK1P49759 RNA5SP403-201ENST00000363598 108 ntBASIC0.58□□□□□ -2.32
CLK1P49759 SNORD18A-201ENST00000363753 72 ntBASIC0.58□□□□□ -2.32
CLK1P49759 RNA5SP117-201ENST00000365294 118 ntBASIC0.58□□□□□ -2.32
CLK1P49759 RNY1P8-201ENST00000383970 114 ntBASIC0.58□□□□□ -2.32
CLK1P49759 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
CLK1P49759 snoU13.11-201ENST00000459219 104 ntBASIC0.58□□□□□ -2.32
CLK1P49759 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.58□□□□□ -2.32
CLK1P49759 MIR3678-201ENST00000578455 94 ntBASIC0.58□□□□□ -2.32
CLK1P49759 MIR6788-201ENST00000618842 66 ntBASIC0.58□□□□□ -2.32
CLK1P49759 SNORD116-10-201ENST00000363791 102 ntBASIC0.57□□□□□ -2.32
CLK1P49759 SNORD28-201ENST00000384706 75 ntBASIC0.57□□□□□ -2.32
CLK1P49759 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
CLK1P49759 Y_RNA.648-201ENST00000459455 110 ntBASIC0.57□□□□□ -2.32
CLK1P49759 Y_RNA.676-201ENST00000516393 96 ntBASIC0.57□□□□□ -2.32
CLK1P49759 RNU7-161P-201ENST00000517289 62 ntBASIC0.57□□□□□ -2.32
CLK1P49759 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
CLK1P49759 Y_RNA.190-201ENST00000363964 101 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNU4-45P-201ENST00000365469 141 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNU6-945P-201ENST00000383947 107 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNU6-49P-201ENST00000384256 107 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNU6-524P-201ENST00000384270 107 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNY1P7-201ENST00000384743 110 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNU6-243P-201ENST00000391140 107 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNA5SP222-201ENST00000411039 105 ntBASIC0.56□□□□□ -2.32
CLK1P49759 AL161932.1-201ENST00000437408 146 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNU7-85P-201ENST00000458851 63 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RPS29P1-201ENST00000465274 159 ntBASIC0.56□□□□□ -2.32
CLK1P49759 Y_RNA.694-201ENST00000516677 117 ntBASIC0.56□□□□□ -2.32
CLK1P49759 RNU6-135P-201ENST00000516769 101 ntBASIC0.56□□□□□ -2.32
CLK1P49759 MIR4639-201ENST00000584938 69 ntBASIC0.56□□□□□ -2.32
CLK1P49759 SNORA36.1-201ENST00000363424 132 ntBASIC0.55□□□□□ -2.32
CLK1P49759 SNORD115-24-201ENST00000363528 82 ntBASIC0.55□□□□□ -2.32
CLK1P49759 RNU6-957P-201ENST00000363652 99 ntBASIC0.55□□□□□ -2.32
CLK1P49759 Y_RNA.221-201ENST00000364248 96 ntBASIC0.55□□□□□ -2.32
CLK1P49759 Y_RNA.283-201ENST00000364798 112 ntBASIC0.55□□□□□ -2.32
CLK1P49759 RNU6-1131P-201ENST00000364955 107 ntBASIC0.55□□□□□ -2.32
CLK1P49759 MIR548J-201ENST00000408833 112 ntBASIC0.55□□□□□ -2.32
CLK1P49759 RNU6-75P-201ENST00000515944 104 ntBASIC0.55□□□□□ -2.32
CLK1P49759 RNA5SP47-201ENST00000517230 109 ntBASIC0.55□□□□□ -2.32
CLK1P49759 RNA5SP94-201ENST00000516917 108 ntBASIC0.54□□□□□ -2.32
CLK1P49759 MIR151B-201ENST00000584249 96 ntBASIC0.54□□□□□ -2.32
CLK1P49759 AC244669.1-204ENST00000621564 178 ntBASIC0.54□□□□□ -2.32
CLK1P49759 TRDV1-202ENST00000621643 102 ntBASIC0.54□□□□□ -2.32
CLK1P49759 MIR6828-201ENST00000636181 60 ntBASIC0.54□□□□□ -2.32
CLK1P49759 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.54□□□□□ -2.32
CLK1P49759 MIR140-201ENST00000385282 100 ntBASIC0.53□□□□□ -2.32
CLK1P49759 RNU6-469P-201ENST00000516253 101 ntBASIC0.53□□□□□ -2.32
CLK1P49759 SCARNA16.5-201ENST00000517114 183 ntBASIC0.53□□□□□ -2.32
CLK1P49759 RNA5SP170-201ENST00000517150 101 ntBASIC0.53□□□□□ -2.32
CLK1P49759 MTRNR2L2-201ENST00000604882 87 ntBASIC0.53□□□□□ -2.32
CLK1P49759 U6.100-201ENST00000636230 99 ntBASIC0.53□□□□□ -2.32
CLK1P49759 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.52□□□□□ -2.33
CLK1P49759 RNY4P30-201ENST00000410216 95 ntBASIC0.52□□□□□ -2.33
CLK1P49759 SNORD4B-201ENST00000459083 72 ntBASIC0.52□□□□□ -2.33
CLK1P49759 RNU6-844P-201ENST00000517175 102 ntBASIC0.52□□□□□ -2.33
CLK1P49759 AC026421.1-201ENST00000519101 163 ntBASIC0.52□□□□□ -2.33
CLK1P49759 MIR5000-201ENST00000577717 103 ntBASIC0.52□□□□□ -2.33
CLK1P49759 MIR5582-201ENST00000579697 68 ntBASIC0.52□□□□□ -2.33
CLK1P49759 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
CLK1P49759 SNORA36.2-201ENST00000384004 127 ntBASIC0.51□□□□□ -2.33
CLK1P49759 RNU6-466P-201ENST00000391224 103 ntBASIC0.51□□□□□ -2.33
CLK1P49759 Y_RNA.609-201ENST00000410669 89 ntBASIC0.51□□□□□ -2.33
CLK1P49759 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.51□□□□□ -2.33
CLK1P49759 RNU7-104P-201ENST00000459398 79 ntBASIC0.51□□□□□ -2.33
CLK1P49759 MIR3920-201ENST00000581751 86 ntBASIC0.51□□□□□ -2.33
CLK1P49759 Y_RNA.220-201ENST00000364244 109 ntBASIC0.5□□□□□ -2.33
CLK1P49759 RNU6-1229P-201ENST00000364295 107 ntBASIC0.5□□□□□ -2.33
CLK1P49759 RNU6-726P-201ENST00000364680 107 ntBASIC0.5□□□□□ -2.33
CLK1P49759 RNA5SP517-201ENST00000364724 117 ntBASIC0.5□□□□□ -2.33
CLK1P49759 SNORD41.1-201ENST00000391000 69 ntBASIC0.5□□□□□ -2.33
CLK1P49759 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.5□□□□□ -2.33
CLK1P49759 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
CLK1P49759 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
CLK1P49759 RNU6-1223P-201ENST00000517124 104 ntBASIC0.5□□□□□ -2.33
CLK1P49759 MIR4714-201ENST00000580728 77 ntBASIC0.5□□□□□ -2.33
CLK1P49759 MIR548AG2-201ENST00000581228 64 ntBASIC0.5□□□□□ -2.33
CLK1P49759 RNU6-219P-201ENST00000364728 107 ntBASIC0.49□□□□□ -2.33
CLK1P49759 RNU6-497P-201ENST00000365316 104 ntBASIC0.49□□□□□ -2.33
CLK1P49759 Y_RNA.369-201ENST00000365568 117 ntBASIC0.49□□□□□ -2.33
CLK1P49759 RNU6-132P-201ENST00000383863 107 ntBASIC0.49□□□□□ -2.33
CLK1P49759 SNORA8.2-201ENST00000384372 139 ntBASIC0.49□□□□□ -2.33
CLK1P49759 RNU6-519P-201ENST00000410590 108 ntBASIC0.49□□□□□ -2.33
CLK1P49759 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.49□□□□□ -2.33
CLK1P49759 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
CLK1P49759 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.49□□□□□ -2.33
CLK1P49759 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 217.6 ms