Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 MIR599-201ENST00000385069 95 ntBASIC0.9□□□□□ -2.27
NPTX2P47972 RPS29P1-201ENST00000465274 159 ntBASIC0.9□□□□□ -2.27
NPTX2P47972 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
NPTX2P47972 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.9□□□□□ -2.27
NPTX2P47972 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
NPTX2P47972 MIR644A-201ENST00000385262 94 ntBASIC0.89□□□□□ -2.27
NPTX2P47972 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
NPTX2P47972 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
NPTX2P47972 Y_RNA.43-201ENST00000362670 111 ntBASIC0.88□□□□□ -2.27
NPTX2P47972 Y_RNA.369-201ENST00000365568 117 ntBASIC0.88□□□□□ -2.27
NPTX2P47972 snoU13.11-201ENST00000459219 104 ntBASIC0.88□□□□□ -2.27
NPTX2P47972 Y_RNA.648-201ENST00000459455 110 ntBASIC0.88□□□□□ -2.27
NPTX2P47972 RNU6-844P-201ENST00000517175 102 ntBASIC0.88□□□□□ -2.27
NPTX2P47972 RNU6-1255P-201ENST00000363434 112 ntBASIC0.87□□□□□ -2.27
NPTX2P47972 Y_RNA.224-201ENST00000364308 111 ntBASIC0.87□□□□□ -2.27
NPTX2P47972 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.87□□□□□ -2.27
NPTX2P47972 RNU6-524P-201ENST00000384270 107 ntBASIC0.86□□□□□ -2.27
NPTX2P47972 RNU6-469P-201ENST00000516253 101 ntBASIC0.86□□□□□ -2.27
NPTX2P47972 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.86□□□□□ -2.27
NPTX2P47972 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
NPTX2P47972 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 RNU6-957P-201ENST00000363652 99 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 Y_RNA.221-201ENST00000364248 96 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 Y_RNA.283-201ENST00000364798 112 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 Y_RNA.609-201ENST00000410669 89 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 AL606490.4-201ENST00000423117 127 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 AL161932.1-201ENST00000437408 146 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 RNU7-85P-201ENST00000458851 63 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 AC026421.1-201ENST00000519101 163 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 MIR3678-201ENST00000578455 94 ntBASIC0.85□□□□□ -2.27
NPTX2P47972 SNORD115-24-201ENST00000363528 82 ntBASIC0.84□□□□□ -2.27
NPTX2P47972 RNU6-110P-201ENST00000384508 104 ntBASIC0.84□□□□□ -2.27
NPTX2P47972 RNU6-466P-201ENST00000391224 103 ntBASIC0.84□□□□□ -2.27
NPTX2P47972 RNU6-135P-201ENST00000516769 101 ntBASIC0.84□□□□□ -2.27
NPTX2P47972 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.84□□□□□ -2.27
NPTX2P47972 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
NPTX2P47972 SNORD18A-201ENST00000363753 72 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 RNU6-294P-201ENST00000364999 102 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 RNU6-519P-201ENST00000410590 108 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 SNORD4B-201ENST00000459083 72 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 RNU6-1265P-201ENST00000516342 103 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 TRDV1-202ENST00000621643 102 ntBASIC0.83□□□□□ -2.28
NPTX2P47972 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
NPTX2P47972 RNA5SP403-201ENST00000363598 108 ntBASIC0.82□□□□□ -2.28
NPTX2P47972 RNU4-45P-201ENST00000365469 141 ntBASIC0.82□□□□□ -2.28
NPTX2P47972 RNU6-75P-201ENST00000515944 104 ntBASIC0.82□□□□□ -2.28
NPTX2P47972 RNU7-161P-201ENST00000517289 62 ntBASIC0.82□□□□□ -2.28
NPTX2P47972 MIR4639-201ENST00000584938 69 ntBASIC0.82□□□□□ -2.28
NPTX2P47972 SNORD28-201ENST00000384706 75 ntBASIC0.81□□□□□ -2.28
NPTX2P47972 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.81□□□□□ -2.28
NPTX2P47972 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
NPTX2P47972 RNU6-1134P-201ENST00000365156 101 ntBASIC0.8□□□□□ -2.28
NPTX2P47972 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
NPTX2P47972 RNA5SP47-201ENST00000517230 109 ntBASIC0.8□□□□□ -2.28
NPTX2P47972 MIR4668-201ENST00000582284 70 ntBASIC0.8□□□□□ -2.28
NPTX2P47972 MIR4536-1-201ENST00000583537 88 ntBASIC0.8□□□□□ -2.28
NPTX2P47972 AC244669.1-204ENST00000621564 178 ntBASIC0.8□□□□□ -2.28
NPTX2P47972 U6.100-201ENST00000636230 99 ntBASIC0.8□□□□□ -2.28
NPTX2P47972 RNU6-1229P-201ENST00000364295 107 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 RNY1P8-201ENST00000383970 114 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 SNORD116-22-201ENST00000384430 92 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 RNY1P4-201ENST00000384595 115 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 MIR518E-201ENST00000385252 88 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 RNU7-104P-201ENST00000459398 79 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 RNU6-65P-201ENST00000516332 98 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 AL078603.1-201ENST00000603824 313 ntBASIC0.79□□□□□ -2.28
NPTX2P47972 RNU6-402P-201ENST00000410678 103 ntBASIC0.78□□□□□ -2.28
NPTX2P47972 Y_RNA.620-201ENST00000411009 88 ntBASIC0.78□□□□□ -2.28
NPTX2P47972 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.78□□□□□ -2.28
NPTX2P47972 AC006254.2-201ENST00000603259 279 ntBASIC0.78□□□□□ -2.28
NPTX2P47972 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
NPTX2P47972 Y_RNA.17-201ENST00000362433 111 ntBASIC0.77□□□□□ -2.29
NPTX2P47972 RNU6-219P-201ENST00000364728 107 ntBASIC0.77□□□□□ -2.29
NPTX2P47972 SNORA36.2-201ENST00000384004 127 ntBASIC0.77□□□□□ -2.29
NPTX2P47972 Y_RNA.558-201ENST00000384685 113 ntBASIC0.77□□□□□ -2.29
NPTX2P47972 Y_RNA.593-201ENST00000410292 98 ntBASIC0.77□□□□□ -2.29
NPTX2P47972 RNA5SP94-201ENST00000516917 108 ntBASIC0.77□□□□□ -2.29
NPTX2P47972 SCARNA16.5-201ENST00000517114 183 ntBASIC0.77□□□□□ -2.29
NPTX2P47972 RNU6-267P-201ENST00000516714 103 ntBASIC0.76□□□□□ -2.29
NPTX2P47972 MTRNR2L2-201ENST00000604882 87 ntBASIC0.76□□□□□ -2.29
NPTX2P47972 SNORA36.1-201ENST00000363424 132 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 RNU6-132P-201ENST00000383863 107 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 RNU6-675P-201ENST00000384236 104 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 MIR140-201ENST00000385282 100 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 Y_RNA.596-201ENST00000410462 109 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
NPTX2P47972 RNA5SP220-201ENST00000516298 104 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 RNU7-13P-201ENST00000516413 62 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.75□□□□□ -2.29
NPTX2P47972 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 AC067863.3-201ENST00000624172 122 ntBASIC0.75□□□□□ -2.29
NPTX2P47972 MIRLET7F1-201ENST00000362202 87 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 Y_RNA.118-201ENST00000363300 101 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 RNU4-32P-201ENST00000363404 141 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms