Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNY4P10-201ENST00000365571 96 ntBASIC-1.86□□□□□ -2.71
HTTP42858 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.86□□□□□ -2.71
HTTP42858 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.86□□□□□ -2.71
HTTP42858 AC138393.2-201ENST00000414742 246 ntBASIC-1.86□□□□□ -2.71
HTTP42858 AL593851.1-201ENST00000426171 157 ntBASIC-1.86□□□□□ -2.71
HTTP42858 RNU6-971P-201ENST00000516920 106 ntBASIC-1.86□□□□□ -2.71
HTTP42858 RNU6-681P-201ENST00000364012 104 ntBASIC-1.87□□□□□ -2.71
HTTP42858 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.87□□□□□ -2.71
HTTP42858 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-309P-201ENST00000364573 106 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-195P-201ENST00000411352 109 ntBASIC-1.87□□□□□ -2.71
HTTP42858 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.87□□□□□ -2.71
HTTP42858 MIR367-201ENST00000362299 68 ntBASIC-1.87□□□□□ -2.71
HTTP42858 SNORA33.1-201ENST00000364957 130 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-95P-201ENST00000384697 107 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-816P-201ENST00000390914 107 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-308P-201ENST00000390957 107 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU7-180P-201ENST00000459240 63 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-334P-201ENST00000517072 102 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.87□□□□□ -2.71
HTTP42858 AC006927.2-201ENST00000639256 389 ntBASIC-1.87□□□□□ -2.71
HTTP42858 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.88□□□□□ -2.71
HTTP42858 SNORD116-11-201ENST00000383882 92 ntBASIC-1.88□□□□□ -2.71
HTTP42858 SNORD116-12-201ENST00000384468 92 ntBASIC-1.88□□□□□ -2.71
HTTP42858 MIR581-201ENST00000384895 96 ntBASIC-1.88□□□□□ -2.71
HTTP42858 RNU6-763P-201ENST00000390865 106 ntBASIC-1.88□□□□□ -2.71
HTTP42858 RNU6-129P-201ENST00000391022 107 ntBASIC-1.88□□□□□ -2.71
HTTP42858 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.88□□□□□ -2.71
HTTP42858 AC016911.1-201ENST00000613297 452 ntBASIC-1.88□□□□□ -2.71
HTTP42858 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.88□□□□□ -2.71
HTTP42858 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.88□□□□□ -2.71
HTTP42858 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.88□□□□□ -2.71
HTTP42858 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.88□□□□□ -2.71
HTTP42858 MIR548N-201ENST00000408742 75 ntBASIC-1.88□□□□□ -2.71
HTTP42858 RNU6-523P-201ENST00000516304 54 ntBASIC-1.88□□□□□ -2.71
HTTP42858 RNA5SP153-201ENST00000516498 76 ntBASIC-1.88□□□□□ -2.71
HTTP42858 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.88□□□□□ -2.71
HTTP42858 MTND3P12-201ENST00000559068 328 ntBASIC-1.88□□□□□ -2.71
HTTP42858 AC073869.6-201ENST00000640656 341 ntBASIC-1.88□□□□□ -2.71
HTTP42858 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.88□□□□□ -2.71
HTTP42858 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
HTTP42858 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.88□□□□□ -2.71
HTTP42858 MTND4P7-201ENST00000523876 130 ntBASIC-1.88□□□□□ -2.71
HTTP42858 AC138907.4-201ENST00000570107 226 ntBASIC-1.88□□□□□ -2.71
HTTP42858 U6.92-201ENST00000636464 89 ntBASIC-1.88□□□□□ -2.71
HTTP42858 MTND5P26-201ENST00000426018 1752 ntBASIC-1.89□□□□□ -2.71
HTTP42858 RNY4P34-201ENST00000364779 95 ntBASIC-1.89□□□□□ -2.71
HTTP42858 SNORD50.2-201ENST00000365465 70 ntBASIC-1.89□□□□□ -2.71
HTTP42858 RNU6-643P-201ENST00000384018 107 ntBASIC-1.89□□□□□ -2.71
HTTP42858 AL021368.1-201ENST00000607490 540 ntBASIC-1.89□□□□□ -2.71
HTTP42858 AC006386.1-201ENST00000619436 415 ntBASIC-1.89□□□□□ -2.71
HTTP42858 U4.4-201ENST00000620626 117 ntBASIC-1.89□□□□□ -2.71
HTTP42858 AC099654.13-201ENST00000639774 207 ntBASIC-1.89□□□□□ -2.71
HTTP42858 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.89□□□□□ -2.71
HTTP42858 RNA5SP292-201ENST00000390974 118 ntBASIC-1.89□□□□□ -2.71
HTTP42858 RNU6-570P-201ENST00000517051 105 ntBASIC-1.89□□□□□ -2.71
HTTP42858 MTCO2P4-201ENST00000517968 247 ntBASIC-1.89□□□□□ -2.71
HTTP42858 AC097520.1-201ENST00000624435 385 ntBASIC-1.89□□□□□ -2.71
HTTP42858 MIR202-201ENST00000362219 110 ntBASIC-1.9□□□□□ -2.71
HTTP42858 SNORD113-2-201ENST00000391082 72 ntBASIC-1.9□□□□□ -2.71
HTTP42858 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.9□□□□□ -2.71
HTTP42858 AL121895.2-201ENST00000619558 447 ntBASIC-1.9□□□□□ -2.71
HTTP42858 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.9□□□□□ -2.71
HTTP42858 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.9□□□□□ -2.71
HTTP42858 RNU1-115P-201ENST00000365329 160 ntBASIC-1.9□□□□□ -2.71
HTTP42858 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.9□□□□□ -2.71
HTTP42858 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.9□□□□□ -2.71
HTTP42858 RNU7-151P-201ENST00000516930 53 ntBASIC-1.9□□□□□ -2.71
HTTP42858 MIR429-201ENST00000362106 83 ntBASIC-1.91□□□□□ -2.71
HTTP42858 SNORD114-13-201ENST00000364377 74 ntBASIC-1.91□□□□□ -2.71
HTTP42858 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.91□□□□□ -2.71
HTTP42858 RNU6-737P-201ENST00000365370 107 ntBASIC-1.91□□□□□ -2.71
HTTP42858 RNU6-976P-201ENST00000516086 111 ntBASIC-1.91□□□□□ -2.71
HTTP42858 AP001506.1-201ENST00000615444 211 ntBASIC-1.91□□□□□ -2.71
HTTP42858 RNU6-698P-201ENST00000363523 107 ntBASIC-1.91□□□□□ -2.72
HTTP42858 RNU6-34P-201ENST00000364874 107 ntBASIC-1.91□□□□□ -2.72
HTTP42858 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.91□□□□□ -2.72
HTTP42858 MIR548U-201ENST00000390728 81 ntBASIC-1.91□□□□□ -2.72
HTTP42858 MIR3672-201ENST00000584290 82 ntBASIC-1.91□□□□□ -2.72
HTTP42858 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.91□□□□□ -2.72
HTTP42858 RNY3P3-201ENST00000363816 102 ntBASIC-1.91□□□□□ -2.72
HTTP42858 MTND3P1-201ENST00000441336 220 ntBASIC-1.91□□□□□ -2.72
HTTP42858 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.91□□□□□ -2.72
HTTP42858 MIR3682-201ENST00000581338 84 ntBASIC-1.91□□□□□ -2.72
HTTP42858 U2.7-201ENST00000619197 100 ntBASIC-1.91□□□□□ -2.72
HTTP42858 RNU6-340P-201ENST00000364005 107 ntBASIC-1.92□□□□□ -2.72
HTTP42858 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.92□□□□□ -2.72
HTTP42858 SNORD90-201ENST00000391145 111 ntBASIC-1.92□□□□□ -2.72
HTTP42858 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.92□□□□□ -2.72
HTTP42858 MIR4659A-201ENST00000580269 81 ntBASIC-1.92□□□□□ -2.72
HTTP42858 MIR4424-201ENST00000585257 86 ntBASIC-1.92□□□□□ -2.72
HTTP42858 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.92□□□□□ -2.72
HTTP42858 RNU6-151P-201ENST00000364158 107 ntBASIC-1.92□□□□□ -2.72
HTTP42858 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.92□□□□□ -2.72
HTTP42858 RNU6-974P-201ENST00000384099 108 ntBASIC-1.92□□□□□ -2.72
HTTP42858 MIR548AA1-201ENST00000384971 97 ntBASIC-1.92□□□□□ -2.72
HTTP42858 MTND4P28-201ENST00000426217 387 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms