Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-175P-201ENST00000516896 107 ntBASIC-0.24□□□□□ -2.45
TNFSF9P41273 YWHAEP2-201ENST00000580066 112 ntBASIC-0.24□□□□□ -2.45
TNFSF9P41273 RNU6-235P-201ENST00000362644 107 ntBASIC-0.25□□□□□ -2.45
TNFSF9P41273 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.25□□□□□ -2.45
TNFSF9P41273 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.25□□□□□ -2.45
TNFSF9P41273 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.25□□□□□ -2.45
TNFSF9P41273 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
TNFSF9P41273 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.25□□□□□ -2.45
TNFSF9P41273 RNU6-509P-201ENST00000363519 107 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 MIR569-201ENST00000385228 96 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 MIR759-201ENST00000390224 91 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 MIR892B-201ENST00000401279 77 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.26□□□□□ -2.45
TNFSF9P41273 TRDV1-202ENST00000621643 102 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 MIR1295B-201ENST00000636144 60 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 MIR6086-201ENST00000638065 55 ntBASIC-0.26□□□□□ -2.45
TNFSF9P41273 SNORD114-31-201ENST00000363219 75 ntBASIC-0.27□□□□□ -2.45
TNFSF9P41273 RNA5SP205-201ENST00000364653 136 ntBASIC-0.27□□□□□ -2.45
TNFSF9P41273 MIR181B2-201ENST00000385004 89 ntBASIC-0.27□□□□□ -2.45
TNFSF9P41273 MIR617-201ENST00000385030 97 ntBASIC-0.27□□□□□ -2.45
TNFSF9P41273 SPINT5P-201ENST00000448174 155 ntBASIC-0.27□□□□□ -2.45
TNFSF9P41273 IGLVI-20-201ENST00000519296 130 ntBASIC-0.27□□□□□ -2.45
TNFSF9P41273 CR383656.4-201ENST00000546909 122 ntBASIC-0.27□□□□□ -2.45
TNFSF9P41273 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 MIR548D2-201ENST00000384955 97 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 SNORA75.1-201ENST00000391130 148 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 snoU13.11-201ENST00000459219 104 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 MIR3144-201ENST00000579460 79 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 MIR3163-201ENST00000581592 73 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 U7.6-201ENST00000610841 64 ntBASIC-0.28□□□□□ -2.45
TNFSF9P41273 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 MIR539-201ENST00000365690 78 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 MIR548G-201ENST00000408442 89 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 AL158147.1-201ENST00000443970 75 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 SNORD4A-201ENST00000459174 72 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 AP001328.1-201ENST00000528550 176 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 AC069503.3-201ENST00000618674 145 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 AL512310.12-203ENST00000640543 90 ntBASIC-0.29□□□□□ -2.46
TNFSF9P41273 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.3□□□□□ -2.46
TNFSF9P41273 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 RNU6-363P-201ENST00000362895 105 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 MIR1265-201ENST00000408444 86 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 RNU6-426P-201ENST00000516464 97 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 MIR4460-201ENST00000577862 86 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 MIR3613-201ENST00000579844 87 ntBASIC-0.3□□□□□ -2.46
TNFSF9P41273 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 SNORD114-11-201ENST00000363738 75 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 SNORD49B-201ENST00000365172 72 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 RNU6-811P-201ENST00000384069 107 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 RNU6-154P-201ENST00000384306 106 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 MT-TY-201ENST00000387409 66 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 HAR1A.1-201ENST00000459583 118 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 AC104692.1-201ENST00000472406 90 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 AC097510.1-201ENST00000510945 133 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 MIR548X2-201ENST00000579776 100 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 AP001340.1-201ENST00000624405 217 ntBASIC-0.31□□□□□ -2.46
TNFSF9P41273 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 MIR652-201ENST00000385278 98 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 RNU6-243P-201ENST00000391140 107 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 MIR513C-201ENST00000401352 84 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 MIR4696-201ENST00000581431 70 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 uc_338.10-201ENST00000621872 182 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 AL035470.1-201ENST00000622571 220 ntBASIC-0.32□□□□□ -2.46
TNFSF9P41273 MTND5P18-201ENST00000445624 1801 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 SNORA18.1-201ENST00000363418 128 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 SNORD58C-201ENST00000365223 64 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 SNORA49-201ENST00000386157 136 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 AC109327.2-201ENST00000448339 378 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 AP001180.6-201ENST00000584918 159 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 RNU6-90P-201ENST00000606352 106 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 AL590491.3-201ENST00000610731 82 ntBASIC-0.33□□□□□ -2.46
TNFSF9P41273 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
TNFSF9P41273 MIR148A-201ENST00000362215 68 ntBASIC-0.34□□□□□ -2.46
TNFSF9P41273 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.34□□□□□ -2.46
TNFSF9P41273 RNU6-647P-201ENST00000364243 107 ntBASIC-0.34□□□□□ -2.46
TNFSF9P41273 RNU6-46P-201ENST00000383860 107 ntBASIC-0.34□□□□□ -2.46
TNFSF9P41273 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 210.9 ms