Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 MIR4643-201ENST00000577473 78 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 MIR548S-201ENST00000581352 82 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 MIR4280-201ENST00000582178 76 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 AP000676.1-201ENST00000533307 52 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.81□□□□□ -2.54
COL18A1P39060 RNU6-243P-201ENST00000391140 107 ntBASIC-0.81□□□□□ -2.54
COL18A1P39060 SNORA13-201ENST00000458790 133 ntBASIC-0.81□□□□□ -2.54
COL18A1P39060 MIR548AE1-201ENST00000583292 70 ntBASIC-0.81□□□□□ -2.54
COL18A1P39060 AL160413.1-201ENST00000622780 310 ntBASIC-0.81□□□□□ -2.54
COL18A1P39060 RNA5SP93-201ENST00000362525 114 ntBASIC-0.82□□□□□ -2.54
COL18A1P39060 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.82□□□□□ -2.54
COL18A1P39060 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.82□□□□□ -2.54
COL18A1P39060 RNU6-616P-201ENST00000384353 107 ntBASIC-0.82□□□□□ -2.54
COL18A1P39060 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.82□□□□□ -2.54
COL18A1P39060 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 RNU6-493P-201ENST00000391321 108 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 AC007012.1-201ENST00000567192 175 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 MIR6844-201ENST00000637122 62 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 RNU6-275P-201ENST00000364910 107 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 MIR548P-201ENST00000408336 84 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 RNU6-274P-201ENST00000459566 107 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 MIR3171-201ENST00000584270 74 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 AC087741.2-201ENST00000619415 172 ntBASIC-0.83□□□□□ -2.54
COL18A1P39060 MTND4P29-201ENST00000503122 1372 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 SNORA51.5-201ENST00000384126 131 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 RNU6-768P-201ENST00000384683 107 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 MIR652-201ENST00000385278 98 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.84□□□□□ -2.54
COL18A1P39060 SNORD36A-201ENST00000362874 73 ntBASIC-0.85□□□□□ -2.55
COL18A1P39060 SNORD27-201ENST00000363981 72 ntBASIC-0.85□□□□□ -2.55
COL18A1P39060 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.85□□□□□ -2.55
COL18A1P39060 AL445193.1-201ENST00000441183 141 ntBASIC-0.85□□□□□ -2.55
COL18A1P39060 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.85□□□□□ -2.55
COL18A1P39060 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.85□□□□□ -2.55
COL18A1P39060 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.85□□□□□ -2.55
COL18A1P39060 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.86□□□□□ -2.55
COL18A1P39060 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.86□□□□□ -2.55
COL18A1P39060 MIR3646-201ENST00000578301 84 ntBASIC-0.86□□□□□ -2.55
COL18A1P39060 AL137067.1-201ENST00000615933 120 ntBASIC-0.86□□□□□ -2.55
COL18A1P39060 MIR518B-201ENST00000385127 83 ntBASIC-0.87□□□□□ -2.55
COL18A1P39060 MT-TW-201ENST00000387382 68 ntBASIC-0.87□□□□□ -2.55
COL18A1P39060 RNU6-521P-201ENST00000516663 105 ntBASIC-0.87□□□□□ -2.55
COL18A1P39060 RNU6-881P-201ENST00000516813 102 ntBASIC-0.87□□□□□ -2.55
COL18A1P39060 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.87□□□□□ -2.55
COL18A1P39060 RNA5SP169-201ENST00000517268 117 ntBASIC-0.87□□□□□ -2.55
COL18A1P39060 MIR8062-201ENST00000621515 85 ntBASIC-0.87□□□□□ -2.55
COL18A1P39060 U6.106-201ENST00000636360 105 ntBASIC-0.87□□□□□ -2.55
COL18A1P39060 RNU6-312P-201ENST00000364629 107 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 SNORA75.5-201ENST00000391291 81 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 RNU6-588P-201ENST00000410281 105 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 HLA-S-202ENST00000425174 53 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 MIR6851-201ENST00000617060 67 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 TRDV1-202ENST00000621643 102 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 RNU6-238P-201ENST00000363313 106 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 SNORD114-4-201ENST00000363962 75 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 RNU6-309P-201ENST00000364573 106 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 SNORD56B-201ENST00000384713 71 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 MIR34C-201ENST00000384831 77 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 RNU7-55P-201ENST00000459426 62 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 RNU6-635P-201ENST00000516651 102 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 MIR4499-201ENST00000584834 69 ntBASIC-0.88□□□□□ -2.55
COL18A1P39060 RNU6-639P-201ENST00000384074 107 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 SNORD38.3-201ENST00000516599 73 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 RNU7-6P-201ENST00000516845 62 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 SNORA40.17-201ENST00000517256 115 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 MIR3149-201ENST00000584629 83 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 RNU6-90P-201ENST00000606352 106 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 AC091912.2-201ENST00000624798 167 ntBASIC-0.89□□□□□ -2.55
COL18A1P39060 MIR759-201ENST00000390224 91 ntBASIC-0.9□□□□□ -2.55
COL18A1P39060 MIR4308-201ENST00000580634 81 ntBASIC-0.9□□□□□ -2.55
COL18A1P39060 AC021753.1-201ENST00000635724 168 ntBASIC-0.9□□□□□ -2.55
COL18A1P39060 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.91□□□□□ -2.55
COL18A1P39060 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.91□□□□□ -2.55
COL18A1P39060 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.91□□□□□ -2.55
COL18A1P39060 AC020661.2-201ENST00000560114 134 ntBASIC-0.91□□□□□ -2.55
COL18A1P39060 uc_338.19-201ENST00000616808 99 ntBASIC-0.91□□□□□ -2.55
COL18A1P39060 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.91□□□□□ -2.55
COL18A1P39060 RNU6-664P-201ENST00000362381 107 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 SNORD115-25-201ENST00000362619 82 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 RNU4-36P-201ENST00000364294 144 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 SNORD74.6-201ENST00000364796 70 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 SNORA33.2-201ENST00000365413 134 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 264.3 ms