Protein–RNA interactions for Protein: P35498

SCN1A, Sodium channel protein type 1 subunit alpha, humanhuman

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1AP35498 AL442128.1-201ENST00000615151 90 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 MIR101-1-201ENST00000362265 75 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 RNU1-141P-201ENST00000364623 158 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 RNU4-11P-201ENST00000365287 132 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 MIR519E-201ENST00000385075 84 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 AL391099.1-201ENST00000624635 187 ntBASIC-0.28□□□□□ -2.45
SCN1AP35498 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 SNORD116-18-201ENST00000383961 92 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 MIR181B2-201ENST00000385004 89 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 MT-TY-201ENST00000387409 66 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 RNA5SP484-201ENST00000458857 111 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 snoU13.19-201ENST00000459148 104 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 RNU7-120P-201ENST00000459334 63 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 MIR4263-201ENST00000584745 83 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 RNU6-90P-201ENST00000606352 106 ntBASIC-0.29□□□□□ -2.46
SCN1AP35498 RNU6-957P-201ENST00000363652 99 ntBASIC-0.3□□□□□ -2.46
SCN1AP35498 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.3□□□□□ -2.46
SCN1AP35498 RNU7-197P-201ENST00000458836 62 ntBASIC-0.3□□□□□ -2.46
SCN1AP35498 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.3□□□□□ -2.46
SCN1AP35498 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.3□□□□□ -2.46
SCN1AP35498 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.3□□□□□ -2.46
SCN1AP35498 U7.2-201ENST00000607576 63 ntBASIC-0.3□□□□□ -2.46
SCN1AP35498 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.3□□□□□ -2.46
SCN1AP35498 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.3□□□□□ -2.46
SCN1AP35498 MIR6514-201ENST00000622549 70 ntBASIC-0.3□□□□□ -2.46
SCN1AP35498 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 SNORD114-11-201ENST00000363738 75 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 RNU6-200P-201ENST00000364743 107 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 AC244250.2-201ENST00000418731 148 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 RNU6-521P-201ENST00000516663 105 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 RNU6-80P-201ENST00000384195 107 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.31□□□□□ -2.46
SCN1AP35498 AC004792.1-201ENST00000614523 137 ntBASIC-0.31□□□□□ -2.46
SCN1AP35498 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 RNU6-832P-201ENST00000363319 107 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 SNORD114-29-201ENST00000364819 70 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 SNORA51.5-201ENST00000384126 131 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 MIR876-201ENST00000401147 81 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 RNA5SP136-201ENST00000410906 107 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 AC093423.1-201ENST00000440817 142 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 RNU7-6P-201ENST00000516845 62 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 MIR3144-201ENST00000579460 79 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.32□□□□□ -2.46
SCN1AP35498 FTX_2.1-201ENST00000618816 94 ntBASIC-0.32□□□□□ -2.46
SCN1AP35498 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 RNU6-811P-201ENST00000384069 107 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 RNU6-463P-201ENST00000384340 107 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 AC109327.2-201ENST00000448339 378 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 RNU6-138P-201ENST00000515952 107 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 AL627230.5-201ENST00000619807 58 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 SNORD115-44-201ENST00000365391 82 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 MIR34C-201ENST00000384831 77 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 MIR577-201ENST00000385196 96 ntBASIC-0.33□□□□□ -2.46
SCN1AP35498 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
SCN1AP35498 RNU6-235P-201ENST00000362644 107 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 SNORD38.1-201ENST00000363863 68 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 RNU7-188P-201ENST00000517063 64 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 MIR548AG2-201ENST00000581228 64 ntBASIC-0.34□□□□□ -2.46
SCN1AP35498 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.35□□□□□ -2.46
SCN1AP35498 RNU6-915P-201ENST00000364943 103 ntBASIC-0.35□□□□□ -2.46
SCN1AP35498 RNU6-524P-201ENST00000384270 107 ntBASIC-0.35□□□□□ -2.46
SCN1AP35498 RNU6-616P-201ENST00000384353 107 ntBASIC-0.35□□□□□ -2.46
SCN1AP35498 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.35□□□□□ -2.46
SCN1AP35498 RNU7-106P-201ENST00000459514 67 ntBASIC-0.35□□□□□ -2.46
SCN1AP35498 RNU6-426P-201ENST00000516464 97 ntBASIC-0.35□□□□□ -2.46
SCN1AP35498 MIR4432-201ENST00000581823 84 ntBASIC-0.35□□□□□ -2.46
SCN1AP35498 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.35□□□□□ -2.47
SCN1AP35498 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.35□□□□□ -2.47
SCN1AP35498 MIR548D2-201ENST00000384955 97 ntBASIC-0.35□□□□□ -2.47
SCN1AP35498 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.35□□□□□ -2.47
SCN1AP35498 SNORD114-28-201ENST00000363610 72 ntBASIC-0.36□□□□□ -2.47
SCN1AP35498 RNY1P11-201ENST00000363759 113 ntBASIC-0.36□□□□□ -2.47
SCN1AP35498 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.36□□□□□ -2.47
SCN1AP35498 YWHAEP2-201ENST00000580066 112 ntBASIC-0.36□□□□□ -2.47
SCN1AP35498 AC096720.1-201ENST00000604441 183 ntBASIC-0.36□□□□□ -2.47
SCN1AP35498 RNU6-409P-201ENST00000384114 104 ntBASIC-0.37□□□□□ -2.47
SCN1AP35498 MIR2113-201ENST00000459007 91 ntBASIC-0.37□□□□□ -2.47
SCN1AP35498 RNA5SP331-201ENST00000364986 107 ntBASIC-0.37□□□□□ -2.47
SCN1AP35498 MIR1263-201ENST00000408324 86 ntBASIC-0.37□□□□□ -2.47
SCN1AP35498 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.37□□□□□ -2.47
SCN1AP35498 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.37□□□□□ -2.47
SCN1AP35498 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.37□□□□□ -2.47
SCN1AP35498 AP001340.1-201ENST00000624405 217 ntBASIC-0.37□□□□□ -2.47
SCN1AP35498 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.38□□□□□ -2.47
SCN1AP35498 SNORA32.1-201ENST00000364514 115 ntBASIC-0.38□□□□□ -2.47
SCN1AP35498 SNORD126-201ENST00000459475 77 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms