Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-90P-201ENST00000606352 106 ntBASIC-0.28□□□□□ -2.45
HOXD13P35453 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.29□□□□□ -2.46
HOXD13P35453 SNORD38.1-201ENST00000363863 68 ntBASIC-0.29□□□□□ -2.46
HOXD13P35453 RNU1-141P-201ENST00000364623 158 ntBASIC-0.29□□□□□ -2.46
HOXD13P35453 RNU6-409P-201ENST00000384114 104 ntBASIC-0.29□□□□□ -2.46
HOXD13P35453 RNU6-886P-201ENST00000384319 105 ntBASIC-0.29□□□□□ -2.46
HOXD13P35453 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.29□□□□□ -2.46
HOXD13P35453 RNU6-180P-201ENST00000516697 61 ntBASIC-0.29□□□□□ -2.46
HOXD13P35453 MIR6759-201ENST00000638110 65 ntBASIC-0.29□□□□□ -2.46
HOXD13P35453 MIR106A-201ENST00000384870 81 ntBASIC-0.3□□□□□ -2.46
HOXD13P35453 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.3□□□□□ -2.46
HOXD13P35453 HMGN2P22-201ENST00000427588 175 ntBASIC-0.3□□□□□ -2.46
HOXD13P35453 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.3□□□□□ -2.46
HOXD13P35453 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.3□□□□□ -2.46
HOXD13P35453 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.31□□□□□ -2.46
HOXD13P35453 SNORA18.1-201ENST00000363418 128 ntBASIC-0.31□□□□□ -2.46
HOXD13P35453 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.31□□□□□ -2.46
HOXD13P35453 RNU6-46P-201ENST00000383860 107 ntBASIC-0.31□□□□□ -2.46
HOXD13P35453 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
HOXD13P35453 MIR516B1-201ENST00000385211 90 ntBASIC-0.32□□□□□ -2.46
HOXD13P35453 MIR214-201ENST00000385214 110 ntBASIC-0.32□□□□□ -2.46
HOXD13P35453 MIR548G-201ENST00000408442 89 ntBASIC-0.32□□□□□ -2.46
HOXD13P35453 CR383656.4-201ENST00000546909 122 ntBASIC-0.32□□□□□ -2.46
HOXD13P35453 AL670379.3-201ENST00000605040 251 ntBASIC-0.32□□□□□ -2.46
HOXD13P35453 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.33□□□□□ -2.46
HOXD13P35453 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.33□□□□□ -2.46
HOXD13P35453 RNA5SP285-201ENST00000516619 119 ntBASIC-0.33□□□□□ -2.46
HOXD13P35453 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.33□□□□□ -2.46
HOXD13P35453 AC025166.1-201ENST00000612411 163 ntBASIC-0.33□□□□□ -2.46
HOXD13P35453 AC069503.3-201ENST00000618674 145 ntBASIC-0.33□□□□□ -2.46
HOXD13P35453 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.33□□□□□ -2.46
HOXD13P35453 MIR876-201ENST00000401147 81 ntBASIC-0.34□□□□□ -2.46
HOXD13P35453 RNU6-735P-201ENST00000410612 107 ntBASIC-0.34□□□□□ -2.46
HOXD13P35453 RNU6-781P-201ENST00000516377 101 ntBASIC-0.34□□□□□ -2.46
HOXD13P35453 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
HOXD13P35453 MIR4473-201ENST00000583731 91 ntBASIC-0.34□□□□□ -2.46
HOXD13P35453 MIR148A-201ENST00000362215 68 ntBASIC-0.35□□□□□ -2.47
HOXD13P35453 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.35□□□□□ -2.47
HOXD13P35453 MIR519E-201ENST00000385075 84 ntBASIC-0.35□□□□□ -2.47
HOXD13P35453 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.35□□□□□ -2.47
HOXD13P35453 MIR4460-201ENST00000577862 86 ntBASIC-0.35□□□□□ -2.47
HOXD13P35453 uc_338.10-201ENST00000621872 182 ntBASIC-0.35□□□□□ -2.47
HOXD13P35453 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.36□□□□□ -2.47
HOXD13P35453 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.36□□□□□ -2.47
HOXD13P35453 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.36□□□□□ -2.47
HOXD13P35453 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.36□□□□□ -2.47
HOXD13P35453 TRDV1-202ENST00000621643 102 ntBASIC-0.36□□□□□ -2.47
HOXD13P35453 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.36□□□□□ -2.47
HOXD13P35453 RNU6-235P-201ENST00000362644 107 ntBASIC-0.37□□□□□ -2.47
HOXD13P35453 SNORD36A-201ENST00000362874 73 ntBASIC-0.37□□□□□ -2.47
HOXD13P35453 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
HOXD13P35453 MIR1912-201ENST00000410389 80 ntBASIC-0.37□□□□□ -2.47
HOXD13P35453 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.37□□□□□ -2.47
HOXD13P35453 AC096531.1-201ENST00000419107 107 ntBASIC-0.37□□□□□ -2.47
HOXD13P35453 MIR2113-201ENST00000459007 91 ntBASIC-0.37□□□□□ -2.47
HOXD13P35453 AC096720.1-201ENST00000604441 183 ntBASIC-0.37□□□□□ -2.47
HOXD13P35453 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 SNORD49B-201ENST00000365172 72 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 SNORD58C-201ENST00000365223 64 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 RNU6-816P-201ENST00000390914 107 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 RNU6-426P-201ENST00000516464 97 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 MTND5P41-201ENST00000517498 206 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 IGLVI-20-201ENST00000519296 130 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 YWHAEP2-201ENST00000580066 112 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 MTND5P18-201ENST00000445624 1801 ntBASIC-0.38□□□□□ -2.47
HOXD13P35453 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.39□□□□□ -2.47
HOXD13P35453 SNORA40-201ENST00000388090 126 ntBASIC-0.39□□□□□ -2.47
HOXD13P35453 AC109327.2-201ENST00000448339 378 ntBASIC-0.39□□□□□ -2.47
HOXD13P35453 RNU6-287P-201ENST00000516230 98 ntBASIC-0.39□□□□□ -2.47
HOXD13P35453 MIR548AG2-201ENST00000581228 64 ntBASIC-0.39□□□□□ -2.47
HOXD13P35453 MIR3666-201ENST00000607845 111 ntBASIC-0.39□□□□□ -2.47
HOXD13P35453 AL442128.1-201ENST00000615151 90 ntBASIC-0.39□□□□□ -2.47
HOXD13P35453 AL162726.3-218ENST00000636401 95 ntBASIC-0.39□□□□□ -2.47
HOXD13P35453 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
HOXD13P35453 AC093423.1-201ENST00000440817 142 ntBASIC-0.4□□□□□ -2.47
HOXD13P35453 SNORD126-201ENST00000459475 77 ntBASIC-0.4□□□□□ -2.47
HOXD13P35453 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.4□□□□□ -2.47
HOXD13P35453 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.41□□□□□ -2.48
HOXD13P35453 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.41□□□□□ -2.48
HOXD13P35453 RNU6-480P-201ENST00000384332 107 ntBASIC-0.41□□□□□ -2.48
HOXD13P35453 MIR216B-201ENST00000390186 82 ntBASIC-0.41□□□□□ -2.48
HOXD13P35453 RNA5SP300-201ENST00000391197 107 ntBASIC-0.41□□□□□ -2.48
HOXD13P35453 RNU6-466P-201ENST00000391224 103 ntBASIC-0.41□□□□□ -2.48
HOXD13P35453 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.41□□□□□ -2.48
HOXD13P35453 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.41□□□□□ -2.48
HOXD13P35453 SNORD114-31-201ENST00000363219 75 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 U8.6-201ENST00000364939 135 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 MIR539-201ENST00000365690 78 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 SNORA51.5-201ENST00000384126 131 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 MIR181B2-201ENST00000385004 89 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 RNA5SP272-201ENST00000516095 111 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 RNU7-188P-201ENST00000517063 64 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
HOXD13P35453 SNORD114-29-201ENST00000364819 70 ntBASIC-0.43□□□□□ -2.48
HOXD13P35453 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms