Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR548Z-201ENST00000584743 97 ntBASIC0.93□□□□□ -2.26
SLC6A4P31645 AL353765.1-201ENST00000605514 183 ntBASIC0.93□□□□□ -2.26
SLC6A4P31645 AC103810.7-201ENST00000607821 91 ntBASIC0.93□□□□□ -2.26
SLC6A4P31645 RNU6-1260P-201ENST00000362944 107 ntBASIC0.92□□□□□ -2.26
SLC6A4P31645 RNU6-640P-201ENST00000363693 105 ntBASIC0.92□□□□□ -2.26
SLC6A4P31645 RNY1P4-201ENST00000384595 115 ntBASIC0.92□□□□□ -2.26
SLC6A4P31645 Y_RNA.32-201ENST00000362589 110 ntBASIC0.91□□□□□ -2.26
SLC6A4P31645 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SLC6A4P31645 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.91□□□□□ -2.26
SLC6A4P31645 RNA5SP436-201ENST00000516020 115 ntBASIC0.91□□□□□ -2.26
SLC6A4P31645 Y_RNA.809-201ENST00000516058 95 ntBASIC0.91□□□□□ -2.26
SLC6A4P31645 SNORA31.14-201ENST00000516728 116 ntBASIC0.91□□□□□ -2.26
SLC6A4P31645 MIR3612-201ENST00000579753 87 ntBASIC0.91□□□□□ -2.26
SLC6A4P31645 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.91□□□□□ -2.26
SLC6A4P31645 SNORD58A-201ENST00000383875 65 ntBASIC0.9□□□□□ -2.27
SLC6A4P31645 MIR516A2-201ENST00000384888 90 ntBASIC0.9□□□□□ -2.27
SLC6A4P31645 MIR516A1-201ENST00000385033 90 ntBASIC0.9□□□□□ -2.27
SLC6A4P31645 AC244098.3-201ENST00000424803 96 ntBASIC0.9□□□□□ -2.27
SLC6A4P31645 AC011195.1-201ENST00000578177 177 ntBASIC0.9□□□□□ -2.27
SLC6A4P31645 SNORD36A-201ENST00000362874 73 ntBASIC0.89□□□□□ -2.27
SLC6A4P31645 Y_RNA.220-201ENST00000364244 109 ntBASIC0.89□□□□□ -2.27
SLC6A4P31645 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
SLC6A4P31645 MIR599-201ENST00000385069 95 ntBASIC0.89□□□□□ -2.27
SLC6A4P31645 AL513043.2-201ENST00000573941 143 ntBASIC0.89□□□□□ -2.27
SLC6A4P31645 U7.3-201ENST00000616123 62 ntBASIC0.89□□□□□ -2.27
SLC6A4P31645 MALAT1.1-201ENST00000618249 95 ntBASIC0.89□□□□□ -2.27
SLC6A4P31645 RNU7-195P-201ENST00000458793 62 ntBASIC0.88□□□□□ -2.27
SLC6A4P31645 Y_RNA.648-201ENST00000459455 110 ntBASIC0.88□□□□□ -2.27
SLC6A4P31645 RNU7-106P-201ENST00000459514 67 ntBASIC0.88□□□□□ -2.27
SLC6A4P31645 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.88□□□□□ -2.27
SLC6A4P31645 AC025521.1-201ENST00000621624 286 ntBASIC0.88□□□□□ -2.27
SLC6A4P31645 RNA5SP245-201ENST00000364239 121 ntBASIC0.87□□□□□ -2.27
SLC6A4P31645 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
SLC6A4P31645 RNU6-466P-201ENST00000391224 103 ntBASIC0.87□□□□□ -2.27
SLC6A4P31645 MIR4639-201ENST00000584938 69 ntBASIC0.87□□□□□ -2.27
SLC6A4P31645 RNU6-1229P-201ENST00000364295 107 ntBASIC0.86□□□□□ -2.27
SLC6A4P31645 Y_RNA.374-201ENST00000365606 101 ntBASIC0.86□□□□□ -2.27
SLC6A4P31645 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
SLC6A4P31645 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
SLC6A4P31645 Y_RNA.290-201ENST00000364879 114 ntBASIC0.85□□□□□ -2.27
SLC6A4P31645 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
SLC6A4P31645 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
SLC6A4P31645 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
SLC6A4P31645 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.85□□□□□ -2.27
SLC6A4P31645 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.85□□□□□ -2.27
SLC6A4P31645 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SLC6A4P31645 MIR193B-201ENST00000384907 83 ntBASIC0.84□□□□□ -2.27
SLC6A4P31645 MIR3678-201ENST00000578455 94 ntBASIC0.84□□□□□ -2.27
SLC6A4P31645 SNORD115-24-201ENST00000363528 82 ntBASIC0.83□□□□□ -2.28
SLC6A4P31645 RNY4P30-201ENST00000410216 95 ntBASIC0.83□□□□□ -2.28
SLC6A4P31645 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.83□□□□□ -2.28
SLC6A4P31645 RNU6-162P-201ENST00000516228 103 ntBASIC0.83□□□□□ -2.28
SLC6A4P31645 RNA5SP170-201ENST00000517150 101 ntBASIC0.83□□□□□ -2.28
SLC6A4P31645 RNU6-524P-201ENST00000384270 107 ntBASIC0.82□□□□□ -2.28
SLC6A4P31645 MIR644A-201ENST00000385262 94 ntBASIC0.82□□□□□ -2.28
SLC6A4P31645 RNU6-519P-201ENST00000410590 108 ntBASIC0.82□□□□□ -2.28
SLC6A4P31645 RNA5SP222-201ENST00000411039 105 ntBASIC0.82□□□□□ -2.28
SLC6A4P31645 MIR1273G-201ENST00000577677 100 ntBASIC0.82□□□□□ -2.28
SLC6A4P31645 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
SLC6A4P31645 SNORD18A-201ENST00000363753 72 ntBASIC0.81□□□□□ -2.28
SLC6A4P31645 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
SLC6A4P31645 MIR488-201ENST00000365739 83 ntBASIC0.81□□□□□ -2.28
SLC6A4P31645 SNORD28-201ENST00000384706 75 ntBASIC0.81□□□□□ -2.28
SLC6A4P31645 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
SLC6A4P31645 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
SLC6A4P31645 MIR6513-201ENST00000621188 64 ntBASIC0.81□□□□□ -2.28
SLC6A4P31645 RNA5SP403-201ENST00000363598 108 ntBASIC0.8□□□□□ -2.28
SLC6A4P31645 Y_RNA.283-201ENST00000364798 112 ntBASIC0.8□□□□□ -2.28
SLC6A4P31645 SNORD115-44-201ENST00000365391 82 ntBASIC0.8□□□□□ -2.28
SLC6A4P31645 Y_RNA.369-201ENST00000365568 117 ntBASIC0.8□□□□□ -2.28
SLC6A4P31645 AL161932.1-201ENST00000437408 146 ntBASIC0.8□□□□□ -2.28
SLC6A4P31645 RNU6-65P-201ENST00000516332 98 ntBASIC0.8□□□□□ -2.28
SLC6A4P31645 RNU6-1265P-201ENST00000516342 103 ntBASIC0.8□□□□□ -2.28
SLC6A4P31645 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
SLC6A4P31645 RNA5SP457-201ENST00000363657 124 ntBASIC0.79□□□□□ -2.28
SLC6A4P31645 Y_RNA.221-201ENST00000364248 96 ntBASIC0.79□□□□□ -2.28
SLC6A4P31645 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.79□□□□□ -2.28
SLC6A4P31645 snoU13.11-201ENST00000459219 104 ntBASIC0.79□□□□□ -2.28
SLC6A4P31645 SCARNA16.5-201ENST00000517114 183 ntBASIC0.79□□□□□ -2.28
SLC6A4P31645 RNA5SP47-201ENST00000517230 109 ntBASIC0.79□□□□□ -2.28
SLC6A4P31645 TRDV1-202ENST00000621643 102 ntBASIC0.79□□□□□ -2.28
SLC6A4P31645 RNU6-1298P-201ENST00000362456 101 ntBASIC0.78□□□□□ -2.28
SLC6A4P31645 RNU6-1131P-201ENST00000364955 107 ntBASIC0.78□□□□□ -2.28
SLC6A4P31645 RNU6-844P-201ENST00000517175 102 ntBASIC0.78□□□□□ -2.28
SLC6A4P31645 MIR4536-1-201ENST00000583537 88 ntBASIC0.78□□□□□ -2.28
SLC6A4P31645 AC244669.1-204ENST00000621564 178 ntBASIC0.78□□□□□ -2.28
SLC6A4P31645 AC067863.3-201ENST00000624172 122 ntBASIC0.78□□□□□ -2.28
SLC6A4P31645 RNU6-957P-201ENST00000363652 99 ntBASIC0.77□□□□□ -2.29
SLC6A4P31645 Y_RNA.190-201ENST00000363964 101 ntBASIC0.77□□□□□ -2.29
SLC6A4P31645 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
SLC6A4P31645 MIR5582-201ENST00000579697 68 ntBASIC0.77□□□□□ -2.29
SLC6A4P31645 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.77□□□□□ -2.29
SLC6A4P31645 Y_RNA.43-201ENST00000362670 111 ntBASIC0.76□□□□□ -2.29
SLC6A4P31645 SNORD114-23-201ENST00000363536 72 ntBASIC0.76□□□□□ -2.29
SLC6A4P31645 SNORA36.2-201ENST00000384004 127 ntBASIC0.76□□□□□ -2.29
SLC6A4P31645 SNORD116-22-201ENST00000384430 92 ntBASIC0.76□□□□□ -2.29
SLC6A4P31645 Y_RNA.596-201ENST00000410462 109 ntBASIC0.76□□□□□ -2.29
SLC6A4P31645 Y_RNA.609-201ENST00000410669 89 ntBASIC0.76□□□□□ -2.29
SLC6A4P31645 SNORD4B-201ENST00000459083 72 ntBASIC0.76□□□□□ -2.29
SLC6A4P31645 RNU7-13P-201ENST00000516413 62 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms