Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNU6-811P-201ENST00000384069 107 ntBASIC-0.4□□□□□ -2.47
BDNFP23560 RNU6-463P-201ENST00000384340 107 ntBASIC-0.4□□□□□ -2.47
BDNFP23560 MIR2113-201ENST00000459007 91 ntBASIC-0.4□□□□□ -2.47
BDNFP23560 RNU6-861P-201ENST00000516745 106 ntBASIC-0.4□□□□□ -2.47
BDNFP23560 RNU7-188P-201ENST00000517063 64 ntBASIC-0.4□□□□□ -2.47
BDNFP23560 MIR4460-201ENST00000577862 86 ntBASIC-0.4□□□□□ -2.47
BDNFP23560 MIR6507-201ENST00000613630 70 ntBASIC-0.4□□□□□ -2.47
BDNFP23560 RNA5SP368-201ENST00000364298 116 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 U8.6-201ENST00000364939 135 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 RNU6-915P-201ENST00000364943 103 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 RNU6-574P-201ENST00000384265 107 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 RNU6-243P-201ENST00000391140 107 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 RNA5SP451-201ENST00000410588 110 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 RNA5SP136-201ENST00000410906 107 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 AC244250.2-201ENST00000418731 148 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 RN7SKP19-201ENST00000516016 252 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 RNU6-287P-201ENST00000516230 98 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 AC108676.2-201ENST00000605225 163 ntBASIC-0.41□□□□□ -2.48
BDNFP23560 MIR655-201ENST00000362159 97 ntBASIC-0.42□□□□□ -2.48
BDNFP23560 SNORD36A-201ENST00000362874 73 ntBASIC-0.42□□□□□ -2.48
BDNFP23560 RNU6-682P-201ENST00000363843 106 ntBASIC-0.42□□□□□ -2.48
BDNFP23560 SNORD114-29-201ENST00000364819 70 ntBASIC-0.42□□□□□ -2.48
BDNFP23560 RNU6-460P-201ENST00000391158 108 ntBASIC-0.42□□□□□ -2.48
BDNFP23560 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.42□□□□□ -2.48
BDNFP23560 MIR1255B1-201ENST00000636325 63 ntBASIC-0.42□□□□□ -2.48
BDNFP23560 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 RNU6-151P-201ENST00000364158 107 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 RNU6-647P-201ENST00000364243 107 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 RNA5SP205-201ENST00000364653 136 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 RNU6-200P-201ENST00000364743 107 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 SNORA51.5-201ENST00000384126 131 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 MT-TY-201ENST00000387409 66 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 SNORA81.3-201ENST00000517283 198 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 TRDV1-202ENST00000621643 102 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.43□□□□□ -2.48
BDNFP23560 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 SNORD114-15-201ENST00000364687 72 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 MIR513C-201ENST00000401352 84 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 SNORA7.5-201ENST00000410672 110 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 SPINT5P-201ENST00000448174 155 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 snoU13.19-201ENST00000459148 104 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 RNU6-90P-201ENST00000606352 106 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 AP001340.1-201ENST00000624405 217 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 MIR4788-201ENST00000639104 80 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 AL512310.12-203ENST00000640543 90 ntBASIC-0.44□□□□□ -2.48
BDNFP23560 RNU6-363P-201ENST00000362895 105 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 SNORD38.1-201ENST00000363863 68 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 RNY4P3-201ENST00000365254 95 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 MIR548D2-201ENST00000384955 97 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 MIR548G-201ENST00000408442 89 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 AP001328.1-201ENST00000528550 176 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 MIR548AE1-201ENST00000583292 70 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.45□□□□□ -2.48
BDNFP23560 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 RNU6-154P-201ENST00000384306 106 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 MIR1263-201ENST00000408324 86 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 RNU6-138P-201ENST00000515952 107 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 RNU6-175P-201ENST00000516896 107 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 AC007012.1-201ENST00000567192 175 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 U6.100-201ENST00000636230 99 ntBASIC-0.46□□□□□ -2.48
BDNFP23560 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 RNU6-379P-201ENST00000363813 104 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 MIR539-201ENST00000365690 78 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 RNU6-735P-201ENST00000410612 107 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 AL161932.1-201ENST00000437408 146 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 RPS29P8-201ENST00000445109 171 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 SNORD126-201ENST00000459475 77 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.47□□□□□ -2.48
BDNFP23560 AL590491.3-201ENST00000610731 82 ntBASIC-0.47□□□□□ -2.48
BDNFP23560 SNORD95.1-201ENST00000364099 68 ntBASIC-0.48□□□□□ -2.49
BDNFP23560 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.48□□□□□ -2.49
BDNFP23560 AC096531.1-201ENST00000419107 107 ntBASIC-0.48□□□□□ -2.49
BDNFP23560 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.48□□□□□ -2.49
BDNFP23560 MIR20A-201ENST00000362279 71 ntBASIC-0.49□□□□□ -2.49
BDNFP23560 RNU6-957P-201ENST00000363652 99 ntBASIC-0.49□□□□□ -2.49
BDNFP23560 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.49□□□□□ -2.49
BDNFP23560 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.49□□□□□ -2.49
BDNFP23560 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.49□□□□□ -2.49
BDNFP23560 RNU6-409P-201ENST00000384114 104 ntBASIC-0.49□□□□□ -2.49
BDNFP23560 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.49□□□□□ -2.49
BDNFP23560 MT-TG-201ENST00000387429 68 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 258 ms