Protein–RNA interactions for Protein: P17029

ZKSCAN1, Zinc finger protein with KRAB and SCAN domains 1, humanhuman

Predicted RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1P17029 MIR1197-201ENST00000408818 88 ntBASIC0.61□□□□□ -2.31
ZKSCAN1P17029 AC096720.1-201ENST00000604441 183 ntBASIC0.61□□□□□ -2.31
ZKSCAN1P17029 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.61□□□□□ -2.31
ZKSCAN1P17029 U2.22-201ENST00000636441 106 ntBASIC0.61□□□□□ -2.31
ZKSCAN1P17029 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
ZKSCAN1P17029 SNORD115-24-201ENST00000363528 82 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 Y_RNA.178-201ENST00000363832 102 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 RNU6-1229P-201ENST00000364295 107 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 SNORA8.2-201ENST00000384372 139 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 MIR599-201ENST00000385069 95 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 SNORA40.8-201ENST00000411034 126 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 RNU7-195P-201ENST00000458793 62 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 AC141557.1-201ENST00000540982 400 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 AC243829.6-201ENST00000612652 106 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
ZKSCAN1P17029 RNU6-1260P-201ENST00000362944 107 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 SNORD118-201ENST00000363593 134 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 RNA5SP403-201ENST00000363598 108 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 RNU6-1163P-201ENST00000364516 107 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 MIR516A2-201ENST00000384888 90 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 MIR516A1-201ENST00000385033 90 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 MIR518A1-201ENST00000385068 85 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 Y_RNA.629-201ENST00000411368 105 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 Y_RNA.809-201ENST00000516058 95 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 RNA5SP268-201ENST00000516828 124 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 RNU7-161P-201ENST00000517289 62 ntBASIC0.59□□□□□ -2.31
ZKSCAN1P17029 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
ZKSCAN1P17029 SNORD71-201ENST00000411292 86 ntBASIC0.58□□□□□ -2.32
ZKSCAN1P17029 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
ZKSCAN1P17029 AC091304.10-201ENST00000641554 121 ntBASIC0.57□□□□□ -2.32
ZKSCAN1P17029 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
ZKSCAN1P17029 SNORD36A-201ENST00000362874 73 ntBASIC0.56□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.78-201ENST00000362970 110 ntBASIC0.56□□□□□ -2.32
ZKSCAN1P17029 RNA5SP62-201ENST00000363457 110 ntBASIC0.56□□□□□ -2.32
ZKSCAN1P17029 VTRNA1-3-201ENST00000365645 89 ntBASIC0.56□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.709-201ENST00000516952 92 ntBASIC0.56□□□□□ -2.32
ZKSCAN1P17029 RNU6-1290P-201ENST00000362957 109 ntBASIC0.55□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.221-201ENST00000364248 96 ntBASIC0.55□□□□□ -2.32
ZKSCAN1P17029 RNU6-1254P-201ENST00000391266 104 ntBASIC0.55□□□□□ -2.32
ZKSCAN1P17029 MIR4439-201ENST00000583746 80 ntBASIC0.55□□□□□ -2.32
ZKSCAN1P17029 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
ZKSCAN1P17029 MIR7107-201ENST00000611489 80 ntBASIC0.55□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.57-201ENST00000362806 113 ntBASIC0.54□□□□□ -2.32
ZKSCAN1P17029 RNU6-726P-201ENST00000364680 107 ntBASIC0.54□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.291-201ENST00000364886 113 ntBASIC0.54□□□□□ -2.32
ZKSCAN1P17029 RNU6-106P-201ENST00000384405 107 ntBASIC0.54□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.601-201ENST00000410500 113 ntBASIC0.54□□□□□ -2.32
ZKSCAN1P17029 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
ZKSCAN1P17029 AC109327.2-201ENST00000448339 378 ntBASIC0.54□□□□□ -2.32
ZKSCAN1P17029 RNA5SP227-201ENST00000516184 113 ntBASIC0.54□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.10-201ENST00000362371 110 ntBASIC0.53□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.163-201ENST00000363702 113 ntBASIC0.53□□□□□ -2.32
ZKSCAN1P17029 RNU4-36P-201ENST00000364294 144 ntBASIC0.53□□□□□ -2.32
ZKSCAN1P17029 RNU6-1325P-201ENST00000364905 105 ntBASIC0.53□□□□□ -2.32
ZKSCAN1P17029 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
ZKSCAN1P17029 Y_RNA.659-201ENST00000515994 113 ntBASIC0.53□□□□□ -2.32
ZKSCAN1P17029 RNU6-904P-201ENST00000516206 101 ntBASIC0.53□□□□□ -2.32
ZKSCAN1P17029 MIR548AI-201ENST00000579940 88 ntBASIC0.53□□□□□ -2.32
ZKSCAN1P17029 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.53□□□□□ -2.32
ZKSCAN1P17029 SNORD44.1-201ENST00000363202 61 ntBASIC0.52□□□□□ -2.33
ZKSCAN1P17029 RNU6-1244P-201ENST00000363614 108 ntBASIC0.52□□□□□ -2.33
ZKSCAN1P17029 SNORD45B-201ENST00000364617 72 ntBASIC0.52□□□□□ -2.33
ZKSCAN1P17029 RNU6-524P-201ENST00000384270 107 ntBASIC0.52□□□□□ -2.33
ZKSCAN1P17029 AC067863.3-201ENST00000624172 122 ntBASIC0.52□□□□□ -2.33
ZKSCAN1P17029 Y_RNA.95-201ENST00000363079 95 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 RNU6-1125P-201ENST00000363601 107 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 RNU6-480P-201ENST00000384332 107 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 SNORD41.1-201ENST00000391000 69 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 RNU6-243P-201ENST00000391140 107 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 MIR1302-5-201ENST00000408164 150 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 RNU6-554P-201ENST00000410466 106 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 RNU6-1265P-201ENST00000516342 103 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 RNU6-86P-201ENST00000606534 107 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 MIR2909-201ENST00000617113 69 ntBASIC0.51□□□□□ -2.33
ZKSCAN1P17029 RNU6-1126P-201ENST00000384002 107 ntBASIC0.5□□□□□ -2.33
ZKSCAN1P17029 MIR181B2-201ENST00000385004 89 ntBASIC0.5□□□□□ -2.33
ZKSCAN1P17029 RNY4P18-201ENST00000391107 89 ntBASIC0.5□□□□□ -2.33
ZKSCAN1P17029 SNORA19.1-201ENST00000410656 129 ntBASIC0.5□□□□□ -2.33
ZKSCAN1P17029 RNU7-104P-201ENST00000459398 79 ntBASIC0.5□□□□□ -2.33
ZKSCAN1P17029 RNU6-537P-201ENST00000517277 103 ntBASIC0.5□□□□□ -2.33
ZKSCAN1P17029 MIR4514-201ENST00000581410 57 ntBASIC0.5□□□□□ -2.33
ZKSCAN1P17029 MIRLET7D-201ENST00000362263 87 ntBASIC0.49□□□□□ -2.33
ZKSCAN1P17029 RNU2-59P-201ENST00000410482 191 ntBASIC0.49□□□□□ -2.33
ZKSCAN1P17029 SNORA62.5-201ENST00000516634 120 ntBASIC0.49□□□□□ -2.33
ZKSCAN1P17029 MIR4777-201ENST00000583710 86 ntBASIC0.49□□□□□ -2.33
ZKSCAN1P17029 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ZKSCAN1P17029 Y_RNA.433-201ENST00000384089 102 ntBASIC0.48□□□□□ -2.33
ZKSCAN1P17029 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
ZKSCAN1P17029 AC069271.1-201ENST00000445577 156 ntBASIC0.48□□□□□ -2.33
ZKSCAN1P17029 RNU6-863P-201ENST00000515989 104 ntBASIC0.48□□□□□ -2.33
ZKSCAN1P17029 SCARNA23-201ENST00000516060 130 ntBASIC0.48□□□□□ -2.33
ZKSCAN1P17029 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.48□□□□□ -2.33
ZKSCAN1P17029 RNU6-215P-201ENST00000365169 102 ntBASIC0.47□□□□□ -2.33
ZKSCAN1P17029 MIR3920-201ENST00000581751 86 ntBASIC0.47□□□□□ -2.33
ZKSCAN1P17029 AC012531.4-201ENST00000616509 177 ntBASIC0.47□□□□□ -2.33
ZKSCAN1P17029 AL162376.1-201ENST00000624117 175 ntBASIC0.47□□□□□ -2.33
ZKSCAN1P17029 AC090625.1-201ENST00000357130 210 ntBASIC0.46□□□□□ -2.34
ZKSCAN1P17029 Y_RNA.467-201ENST00000384297 102 ntBASIC0.46□□□□□ -2.34
ZKSCAN1P17029 SNORD20-201ENST00000384550 80 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms