Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL773524.1-201ENST00000614065 229 ntBASIC2.79□□□□□ -1.96
CD44P16070 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.79□□□□□ -1.96
CD44P16070 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.78□□□□□ -1.96
CD44P16070 MIR4529-201ENST00000578110 78 ntBASIC2.78□□□□□ -1.96
CD44P16070 AL161756.2-201ENST00000604597 246 ntBASIC2.78□□□□□ -1.96
CD44P16070 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CD44P16070 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CD44P16070 MIR6073-201ENST00000352083 89 ntBASIC2.77□□□□□ -1.97
CD44P16070 MIR491-201ENST00000384877 84 ntBASIC2.77□□□□□ -1.97
CD44P16070 AC108938.1-201ENST00000451204 136 ntBASIC2.77□□□□□ -1.97
CD44P16070 RNU6-822P-201ENST00000362707 106 ntBASIC2.76□□□□□ -1.97
CD44P16070 RNA5SP456-201ENST00000364002 114 ntBASIC2.76□□□□□ -1.97
CD44P16070 SNORA75.2-201ENST00000391138 150 ntBASIC2.76□□□□□ -1.97
CD44P16070 SNORA75.3-201ENST00000391231 150 ntBASIC2.76□□□□□ -1.97
CD44P16070 AC023827.1-201ENST00000569247 97 ntBASIC2.76□□□□□ -1.97
CD44P16070 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CD44P16070 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CD44P16070 AC062016.1-201ENST00000355719 319 ntBASIC2.75□□□□□ -1.97
CD44P16070 MIR21-201ENST00000362134 72 ntBASIC2.75□□□□□ -1.97
CD44P16070 RNU6-859P-201ENST00000362728 107 ntBASIC2.75□□□□□ -1.97
CD44P16070 RNU6-1204P-201ENST00000363948 107 ntBASIC2.75□□□□□ -1.97
CD44P16070 RNA5SP181-201ENST00000410246 98 ntBASIC2.75□□□□□ -1.97
CD44P16070 RNA5SP320-201ENST00000516263 124 ntBASIC2.75□□□□□ -1.97
CD44P16070 AC138207.3-201ENST00000585289 166 ntBASIC2.75□□□□□ -1.97
CD44P16070 AL137847.3-201ENST00000611521 109 ntBASIC2.75□□□□□ -1.97
CD44P16070 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD44P16070 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CD44P16070 HMGN2P38-201ENST00000423806 265 ntBASIC2.74□□□□□ -1.97
CD44P16070 SCARNA17.3-201ENST00000516381 125 ntBASIC2.74□□□□□ -1.97
CD44P16070 RNU6-165P-201ENST00000517170 99 ntBASIC2.74□□□□□ -1.97
CD44P16070 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CD44P16070 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CD44P16070 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.73□□□□□ -1.97
CD44P16070 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CD44P16070 RNU6-1206P-201ENST00000516339 103 ntBASIC2.73□□□□□ -1.97
CD44P16070 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CD44P16070 SNORA7.1-201ENST00000363750 139 ntBASIC2.72□□□□□ -1.97
CD44P16070 SNORA80A-201ENST00000363922 136 ntBASIC2.72□□□□□ -1.97
CD44P16070 MIR582-201ENST00000365731 98 ntBASIC2.72□□□□□ -1.97
CD44P16070 MIR27B-201ENST00000385129 97 ntBASIC2.72□□□□□ -1.97
CD44P16070 MIR548L-201ENST00000408303 86 ntBASIC2.72□□□□□ -1.97
CD44P16070 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CD44P16070 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.71□□□□□ -1.98
CD44P16070 MIR4319-201ENST00000577285 85 ntBASIC2.71□□□□□ -1.98
CD44P16070 AC244669.1-204ENST00000621564 178 ntBASIC2.71□□□□□ -1.98
CD44P16070 AC006386.2-201ENST00000624491 75 ntBASIC2.71□□□□□ -1.98
CD44P16070 AC012005.1-201ENST00000624575 75 ntBASIC2.71□□□□□ -1.98
CD44P16070 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CD44P16070 MIR519A2-201ENST00000384990 87 ntBASIC2.7□□□□□ -1.98
CD44P16070 MIR548E-201ENST00000408287 88 ntBASIC2.7□□□□□ -1.98
CD44P16070 AC015712.3-201ENST00000559380 164 ntBASIC2.7□□□□□ -1.98
CD44P16070 MIR4639-201ENST00000584938 69 ntBASIC2.7□□□□□ -1.98
CD44P16070 U6.96-201ENST00000636425 70 ntBASIC2.7□□□□□ -1.98
CD44P16070 AC009487.2-201ENST00000420969 6821 ntBASIC2.7□□□□□ -1.98
CD44P16070 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CD44P16070 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD44P16070 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.69□□□□□ -1.98
CD44P16070 Y_RNA.109-201ENST00000363215 102 ntBASIC2.69□□□□□ -1.98
CD44P16070 RNU7-160P-201ENST00000516660 62 ntBASIC2.69□□□□□ -1.98
CD44P16070 RNU6-135P-201ENST00000516769 101 ntBASIC2.69□□□□□ -1.98
CD44P16070 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.69□□□□□ -1.98
CD44P16070 MIR8063-201ENST00000621930 81 ntBASIC2.69□□□□□ -1.98
CD44P16070 AC090617.8-201ENST00000623339 167 ntBASIC2.69□□□□□ -1.98
CD44P16070 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.68□□□□□ -1.98
CD44P16070 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD44P16070 RNU6-726P-201ENST00000364680 107 ntBASIC2.68□□□□□ -1.98
CD44P16070 MIR520F-201ENST00000384824 87 ntBASIC2.68□□□□□ -1.98
CD44P16070 MIR100-201ENST00000385259 80 ntBASIC2.68□□□□□ -1.98
CD44P16070 MIR644A-201ENST00000385262 94 ntBASIC2.68□□□□□ -1.98
CD44P16070 MIR652-201ENST00000385278 98 ntBASIC2.68□□□□□ -1.98
CD44P16070 RNA5SP356-201ENST00000515972 94 ntBASIC2.68□□□□□ -1.98
CD44P16070 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CD44P16070 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CD44P16070 RNA5SP212-201ENST00000391223 107 ntBASIC2.67□□□□□ -1.98
CD44P16070 RNU6-721P-201ENST00000410155 105 ntBASIC2.67□□□□□ -1.98
CD44P16070 AC048334.1-201ENST00000477975 159 ntBASIC2.67□□□□□ -1.98
CD44P16070 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
CD44P16070 MIR548AG1-201ENST00000579932 66 ntBASIC2.67□□□□□ -1.98
CD44P16070 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CD44P16070 Y_RNA.69-201ENST00000362885 109 ntBASIC2.66□□□□□ -1.98
CD44P16070 RNU6-742P-201ENST00000365289 107 ntBASIC2.66□□□□□ -1.98
CD44P16070 SNORA8.2-201ENST00000384372 139 ntBASIC2.66□□□□□ -1.98
CD44P16070 MIR579-201ENST00000385221 98 ntBASIC2.66□□□□□ -1.98
CD44P16070 COTL1P1-201ENST00000422309 375 ntBASIC2.66□□□□□ -1.98
CD44P16070 RNA5SP484-201ENST00000458857 111 ntBASIC2.66□□□□□ -1.98
CD44P16070 RNU7-193P-201ENST00000516723 65 ntBASIC2.66□□□□□ -1.98
CD44P16070 MIR8074-201ENST00000615081 81 ntBASIC2.66□□□□□ -1.98
CD44P16070 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CD44P16070 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CD44P16070 SNORA3A-201ENST00000364113 130 ntBASIC2.65□□□□□ -1.99
CD44P16070 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.65□□□□□ -1.99
CD44P16070 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.64□□□□□ -1.99
CD44P16070 RNA5SP68-201ENST00000363885 119 ntBASIC2.64□□□□□ -1.99
CD44P16070 MIR1255B2-201ENST00000408618 67 ntBASIC2.64□□□□□ -1.99
CD44P16070 AL591806.2-201ENST00000433122 173 ntBASIC2.64□□□□□ -1.99
CD44P16070 AC026436.1-201ENST00000510537 270 ntBASIC2.64□□□□□ -1.99
CD44P16070 RNA5SP148-201ENST00000516527 94 ntBASIC2.64□□□□□ -1.99
CD44P16070 MIR1-1-201ENST00000362147 71 ntBASIC2.63□□□□□ -1.99
CD44P16070 MIR302D-201ENST00000362275 68 ntBASIC2.63□□□□□ -1.99
CD44P16070 Y_RNA.407-201ENST00000383986 113 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms