Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU7-2P-201ENST00000516096 62 ntBASIC-4.2□□□□□ -3.08
VCANP13611 MIR4659A-201ENST00000580269 81 ntBASIC-4.2□□□□□ -3.08
VCANP13611 AC002553.4-201ENST00000616896 331 ntBASIC-4.2□□□□□ -3.08
VCANP13611 Y_RNA.455-201ENST00000384230 98 ntBASIC-4.2□□□□□ -3.08
VCANP13611 RNU6-1307P-201ENST00000391012 103 ntBASIC-4.2□□□□□ -3.08
VCANP13611 RNU6-493P-201ENST00000391321 108 ntBASIC-4.2□□□□□ -3.08
VCANP13611 AL590623.1-201ENST00000427864 105 ntBASIC-4.2□□□□□ -3.08
VCANP13611 RNU6-82P-201ENST00000363970 107 ntBASIC-4.21□□□□□ -3.08
VCANP13611 MIR7110-201ENST00000612638 86 ntBASIC-4.21□□□□□ -3.08
VCANP13611 RNU2-4P-201ENST00000606190 192 ntBASIC-4.21□□□□□ -3.08
VCANP13611 RNU6-845P-201ENST00000362578 103 ntBASIC-4.22□□□□□ -3.08
VCANP13611 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.22□□□□□ -3.08
VCANP13611 MTND3P7-201ENST00000474435 343 ntBASIC-4.22□□□□□ -3.08
VCANP13611 RNU4-11P-201ENST00000365287 132 ntBASIC-4.22□□□□□ -3.08
VCANP13611 RNU6-810P-201ENST00000364001 107 ntBASIC-4.23□□□□□ -3.09
VCANP13611 RNU6-436P-201ENST00000516171 114 ntBASIC-4.23□□□□□ -3.09
VCANP13611 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.23□□□□□ -3.09
VCANP13611 AC092794.1-201ENST00000612734 582 ntBASIC-4.23□□□□□ -3.09
VCANP13611 MTND3P9-201ENST00000429526 346 ntBASIC-4.24□□□□□ -3.09
VCANP13611 MIR4662B-201ENST00000579498 81 ntBASIC-4.24□□□□□ -3.09
VCANP13611 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-4.25□□□□□ -3.09
VCANP13611 AL160004.2-201ENST00000432935 350 ntBASIC-4.25□□□□□ -3.09
VCANP13611 RNU2-69P-201ENST00000516061 100 ntBASIC-4.25□□□□□ -3.09
VCANP13611 RNU6-681P-201ENST00000364012 104 ntBASIC-4.25□□□□□ -3.09
VCANP13611 MIR548I1-201ENST00000408810 149 ntBASIC-4.25□□□□□ -3.09
VCANP13611 AF228730.3-201ENST00000436691 102 ntBASIC-4.26□□□□□ -3.09
VCANP13611 RNU6-151P-201ENST00000364158 107 ntBASIC-4.26□□□□□ -3.09
VCANP13611 MTND3P21-201ENST00000433774 331 ntBASIC-4.26□□□□□ -3.09
VCANP13611 Z82188.1-201ENST00000436709 154 ntBASIC-4.26□□□□□ -3.09
VCANP13611 RNU6-157P-201ENST00000383957 107 ntBASIC-4.27□□□□□ -3.09
VCANP13611 RNU5F-1-201ENST00000362507 117 ntBASIC-4.27□□□□□ -3.09
VCANP13611 SNORD113-8-201ENST00000363497 74 ntBASIC-4.28□□□□□ -3.09
VCANP13611 RNU6-564P-201ENST00000410983 104 ntBASIC-4.28□□□□□ -3.09
VCANP13611 MIR3144-201ENST00000579460 79 ntBASIC-4.28□□□□□ -3.09
VCANP13611 MIR34C-201ENST00000384831 77 ntBASIC-4.29□□□□□ -3.1
VCANP13611 MTND4LP1-201ENST00000446263 157 ntBASIC-4.29□□□□□ -3.1
VCANP13611 RNU6-752P-201ENST00000516376 102 ntBASIC-4.29□□□□□ -3.1
VCANP13611 AP001506.1-201ENST00000615444 211 ntBASIC-4.29□□□□□ -3.1
VCANP13611 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-4.29□□□□□ -3.1
VCANP13611 RNU6-1303P-201ENST00000364841 107 ntBASIC-4.3□□□□□ -3.1
VCANP13611 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.3□□□□□ -3.1
VCANP13611 MIR3064-201ENST00000581130 66 ntBASIC-4.3□□□□□ -3.1
VCANP13611 SNORD115-32-201ENST00000364079 82 ntBASIC-4.3□□□□□ -3.1
VCANP13611 MTCO2P19-201ENST00000427513 598 ntBASIC-4.3□□□□□ -3.1
VCANP13611 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-4.3□□□□□ -3.1
VCANP13611 RNU6-297P-201ENST00000384636 107 ntBASIC-4.31□□□□□ -3.1
VCANP13611 MIR5197-201ENST00000583721 112 ntBASIC-4.31□□□□□ -3.1
VCANP13611 RNU7-51P-201ENST00000516560 62 ntBASIC-4.32□□□□□ -3.1
VCANP13611 MIR548G-201ENST00000408442 89 ntBASIC-4.33□□□□□ -3.1
VCANP13611 Y_RNA.357-201ENST00000365487 109 ntBASIC-4.33□□□□□ -3.1
VCANP13611 RNU6-583P-201ENST00000516012 92 ntBASIC-4.33□□□□□ -3.1
VCANP13611 MRPS35P2-201ENST00000508242 191 ntBASIC-4.33□□□□□ -3.1
VCANP13611 SNORD38.1-201ENST00000363863 68 ntBASIC-4.34□□□□□ -3.1
VCANP13611 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-4.34□□□□□ -3.1
VCANP13611 MTCO2P4-201ENST00000517968 247 ntBASIC-4.34□□□□□ -3.1
VCANP13611 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-4.34□□□□□ -3.1
VCANP13611 Y_RNA.341-201ENST00000365341 102 ntBASIC-4.34□□□□□ -3.1
VCANP13611 RNA5SP292-201ENST00000390974 118 ntBASIC-4.34□□□□□ -3.1
VCANP13611 MTND2P20-201ENST00000440805 661 ntBASIC-4.34□□□□□ -3.1
VCANP13611 RNU6-763P-201ENST00000390865 106 ntBASIC-4.35□□□□□ -3.11
VCANP13611 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-4.35□□□□□ -3.11
VCANP13611 RNU6-126P-201ENST00000516685 103 ntBASIC-4.35□□□□□ -3.11
VCANP13611 RNU6-61P-201ENST00000365528 109 ntBASIC-4.36□□□□□ -3.11
VCANP13611 Y_RNA.688-201ENST00000516565 95 ntBASIC-4.36□□□□□ -3.11
VCANP13611 RNU6-281P-201ENST00000384212 103 ntBASIC-4.36□□□□□ -3.11
VCANP13611 RNU4-18P-201ENST00000516751 149 ntBASIC-4.36□□□□□ -3.11
VCANP13611 AC139792.2-201ENST00000624218 587 ntBASIC-4.36□□□□□ -3.11
VCANP13611 Y_RNA.310-201ENST00000365063 113 ntBASIC-4.36□□□□□ -3.11
VCANP13611 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-4.37□□□□□ -3.11
VCANP13611 RNU7-141P-201ENST00000459304 62 ntBASIC-4.37□□□□□ -3.11
VCANP13611 RNU6-1114P-201ENST00000516022 107 ntBASIC-4.37□□□□□ -3.11
VCANP13611 RNY1P6-201ENST00000384193 109 ntBASIC-4.37□□□□□ -3.11
VCANP13611 RNU6-1122P-201ENST00000384449 107 ntBASIC-4.37□□□□□ -3.11
VCANP13611 RNU6-85P-201ENST00000605989 107 ntBASIC-4.37□□□□□ -3.11
VCANP13611 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-4.37□□□□□ -3.11
VCANP13611 MIR421-201ENST00000365696 85 ntBASIC-4.37□□□□□ -3.11
VCANP13611 RNA5SP173-201ENST00000364857 136 ntBASIC-4.38□□□□□ -3.11
VCANP13611 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.38□□□□□ -3.11
VCANP13611 Y_RNA.304-201ENST00000365011 112 ntBASIC-4.38□□□□□ -3.11
VCANP13611 SNORD50.2-201ENST00000365465 70 ntBASIC-4.38□□□□□ -3.11
VCANP13611 SNORA72.4-201ENST00000384174 132 ntBASIC-4.38□□□□□ -3.11
VCANP13611 Y_RNA.465-201ENST00000384293 102 ntBASIC-4.38□□□□□ -3.11
VCANP13611 Y_RNA.618-201ENST00000410949 107 ntBASIC-4.38□□□□□ -3.11
VCANP13611 RNA5SP215-201ENST00000363440 122 ntBASIC-4.39□□□□□ -3.11
VCANP13611 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-4.39□□□□□ -3.11
VCANP13611 RNU6-888P-201ENST00000363010 101 ntBASIC-4.39□□□□□ -3.11
VCANP13611 SNORA79-201ENST00000408376 140 ntBASIC-4.39□□□□□ -3.11
VCANP13611 RNU6-1068P-201ENST00000410958 103 ntBASIC-4.39□□□□□ -3.11
VCANP13611 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-4.39□□□□□ -3.11
VCANP13611 AC069545.1-201ENST00000605671 358 ntBASIC-4.39□□□□□ -3.11
VCANP13611 Y_RNA.606-201ENST00000410579 103 ntBASIC-4.39□□□□□ -3.11
VCANP13611 RNU4-69P-201ENST00000410677 143 ntBASIC-4.39□□□□□ -3.11
VCANP13611 AC025521.1-201ENST00000621624 286 ntBASIC-4.39□□□□□ -3.11
VCANP13611 Y_RNA.83-201ENST00000363005 113 ntBASIC-4.4□□□□□ -3.11
VCANP13611 MTCYBP36-201ENST00000404146 440 ntBASIC-4.4□□□□□ -3.11
VCANP13611 AC019226.2-201ENST00000625973 424 ntBASIC-4.4□□□□□ -3.11
VCANP13611 AC123904.2-201ENST00000548059 300 ntBASIC-4.4□□□□□ -3.11
VCANP13611 RNU2-42P-201ENST00000410697 113 ntBASIC-4.41□□□□□ -3.12
VCANP13611 RNU6-1145P-201ENST00000384246 107 ntBASIC-4.42□□□□□ -3.12
VCANP13611 Y_RNA.474-201ENST00000384341 102 ntBASIC-4.42□□□□□ -3.12
Retrieved 100 of 98,524 protein–RNA pairs in 464.9 ms