Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 Y_RNA.809-201ENST00000516058 95 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 RNU1-92P-201ENST00000517017 135 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 U6.100-201ENST00000636230 99 ntBASIC2.15□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-1241P-201ENST00000384536 107 ntBASIC2.14□□□□□ -2.07
CSB-PGBD3P0DP91 SNORD83.1-201ENST00000411362 77 ntBASIC2.14□□□□□ -2.07
CSB-PGBD3P0DP91 MIR3140-201ENST00000583685 90 ntBASIC2.14□□□□□ -2.07
CSB-PGBD3P0DP91 MIR6082-201ENST00000613604 109 ntBASIC2.14□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-1260P-201ENST00000362944 107 ntBASIC2.13□□□□□ -2.07
CSB-PGBD3P0DP91 SNORD115-31-201ENST00000365318 82 ntBASIC2.13□□□□□ -2.07
CSB-PGBD3P0DP91 MIR548H5-201ENST00000580314 60 ntBASIC2.13□□□□□ -2.07
CSB-PGBD3P0DP91 MIR4696-201ENST00000581431 70 ntBASIC2.13□□□□□ -2.07
CSB-PGBD3P0DP91 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.42-201ENST00000362660 108 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 SNORA7.1-201ENST00000363750 139 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-392P-201ENST00000364926 101 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-154P-201ENST00000384306 106 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-649P-201ENST00000384463 107 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.697-201ENST00000516776 113 ntBASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.12□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-664P-201ENST00000362381 107 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.36-201ENST00000362602 112 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.56-201ENST00000362798 112 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.239-201ENST00000364444 113 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.371-201ENST00000365591 113 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 MIR489-201ENST00000384923 84 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 MIR2113-201ENST00000459007 91 ntBASIC2.11□□□□□ -2.07
CSB-PGBD3P0DP91 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-340P-201ENST00000364005 107 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 Y_RNA.330-201ENST00000365230 109 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 SNORD101-201ENST00000384027 73 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 SNORA8.1-201ENST00000384250 140 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 SNORD30.1-201ENST00000391309 70 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 MIR1323-201ENST00000408090 73 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 MIR1257-201ENST00000408490 117 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 AL157834.3-201ENST00000615543 103 ntBASIC2.1□□□□□ -2.07
CSB-PGBD3P0DP91 RNU6-291P-201ENST00000384720 107 ntBASIC2.09□□□□□ -2.07
CSB-PGBD3P0DP91 MIR942-201ENST00000401111 86 ntBASIC2.09□□□□□ -2.07
CSB-PGBD3P0DP91 MIR1276-201ENST00000408707 83 ntBASIC2.09□□□□□ -2.07
CSB-PGBD3P0DP91 RNU7-10P-201ENST00000607194 63 ntBASIC2.09□□□□□ -2.07
CSB-PGBD3P0DP91 MIR154-201ENST00000385243 84 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA75.2-201ENST00000391138 150 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA75.3-201ENST00000391231 150 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 MIR4421-201ENST00000578133 69 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 MTRNR2L2-201ENST00000604882 87 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.08□□□□□ -2.08
CSB-PGBD3P0DP91 Y_RNA.363-201ENST00000365529 113 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 MIR517C-201ENST00000385103 95 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA31.24-201ENST00000517232 57 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 AC012493.3-201ENST00000604494 112 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 U6.111-201ENST00000636093 83 ntBASIC2.07□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-800P-201ENST00000384473 103 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-910P-201ENST00000390844 107 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 AC097635.1-201ENST00000450678 155 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-765P-201ENST00000516916 99 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 MIR6504-201ENST00000613520 61 ntBASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.06□□□□□ -2.08
CSB-PGBD3P0DP91 RNA5SP245-201ENST00000364239 121 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-934P-201ENST00000365154 107 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 MIR599-201ENST00000385069 95 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 RNU2-59P-201ENST00000410482 191 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 AL591704.2-201ENST00000421658 181 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 snoU13.18-201ENST00000459483 104 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 AC036111.3-201ENST00000526389 112 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 MIR4771-2-201ENST00000577758 74 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 MIR4771-1-201ENST00000582617 74 ntBASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CSB-PGBD3P0DP91 Y_RNA.205-201ENST00000364128 113 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA24B-201ENST00000384176 131 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 MIR125B2-201ENST00000385128 89 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-663P-201ENST00000391105 106 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-1052P-201ENST00000411398 104 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-719P-201ENST00000516671 104 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 RNU7-156P-201ENST00000517214 74 ntBASIC2.04□□□□□ -2.08
CSB-PGBD3P0DP91 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-824P-201ENST00000363724 104 ntBASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 RNY4P3-201ENST00000365254 95 ntBASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 SNORA80D-201ENST00000384488 135 ntBASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 RNU6-1265P-201ENST00000516342 103 ntBASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CSB-PGBD3P0DP91 SNORD113.3-201ENST00000364630 78 ntBASIC2.02□□□□□ -2.09
CSB-PGBD3P0DP91 SNORD48-201ENST00000364953 64 ntBASIC2.02□□□□□ -2.09
CSB-PGBD3P0DP91 Y_RNA.606-201ENST00000410579 103 ntBASIC2.02□□□□□ -2.09
CSB-PGBD3P0DP91 RNU6-935P-201ENST00000410371 100 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 AL354695.1-201ENST00000427935 228 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 RNU7-21P-201ENST00000459430 62 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 SNORA70.22-201ENST00000517160 124 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 AC138907.6-201ENST00000568401 126 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 AC138869.1-201ENST00000568623 124 ntBASIC2.01□□□□□ -2.09
CSB-PGBD3P0DP91 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 MIR451A-201ENST00000385059 72 ntBASIC2□□□□□ -2.09
CSB-PGBD3P0DP91 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms