Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SNORD36A-201ENST00000362874 73 ntBASIC1.02□□□□□ -2.25
SNRPA1P09661 RNU6-243P-201ENST00000391140 107 ntBASIC1.02□□□□□ -2.25
SNRPA1P09661 RNU6-1254P-201ENST00000391266 104 ntBASIC1.02□□□□□ -2.25
SNRPA1P09661 RNU6-351P-201ENST00000516097 100 ntBASIC1.02□□□□□ -2.25
SNRPA1P09661 RNU6-844P-201ENST00000517175 102 ntBASIC1.02□□□□□ -2.25
SNRPA1P09661 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.02□□□□□ -2.25
SNRPA1P09661 uc_338.16-201ENST00000621804 95 ntBASIC1.02□□□□□ -2.25
SNRPA1P09661 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
SNRPA1P09661 AC002350.1-201ENST00000490759 375 ntBASIC1.01□□□□□ -2.25
SNRPA1P09661 AC138907.6-201ENST00000568401 126 ntBASIC1.01□□□□□ -2.25
SNRPA1P09661 AC138869.1-201ENST00000568623 124 ntBASIC1.01□□□□□ -2.25
SNRPA1P09661 SNORD114-2-201ENST00000363953 78 ntBASIC1□□□□□ -2.25
SNRPA1P09661 RNU6-294P-201ENST00000364999 102 ntBASIC1□□□□□ -2.25
SNRPA1P09661 MIR573-201ENST00000384964 99 ntBASIC1□□□□□ -2.25
SNRPA1P09661 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1□□□□□ -2.25
SNRPA1P09661 Y_RNA.809-201ENST00000516058 95 ntBASIC1□□□□□ -2.25
SNRPA1P09661 MIR4714-201ENST00000580728 77 ntBASIC1□□□□□ -2.25
SNRPA1P09661 AC025627.3-201ENST00000582078 182 ntBASIC1□□□□□ -2.25
SNRPA1P09661 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
SNRPA1P09661 MIR599-201ENST00000385069 95 ntBASIC0.99□□□□□ -2.25
SNRPA1P09661 Y_RNA.609-201ENST00000410669 89 ntBASIC0.99□□□□□ -2.25
SNRPA1P09661 AL161932.1-201ENST00000437408 146 ntBASIC0.99□□□□□ -2.25
SNRPA1P09661 snoU13.11-201ENST00000459219 104 ntBASIC0.99□□□□□ -2.25
SNRPA1P09661 AC026421.1-201ENST00000519101 163 ntBASIC0.99□□□□□ -2.25
SNRPA1P09661 AC011195.1-201ENST00000578177 177 ntBASIC0.99□□□□□ -2.25
SNRPA1P09661 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.99□□□□□ -2.25
SNRPA1P09661 RNU6-1134P-201ENST00000365156 101 ntBASIC0.98□□□□□ -2.25
SNRPA1P09661 RNA5SP117-201ENST00000365294 118 ntBASIC0.98□□□□□ -2.25
SNRPA1P09661 MIR519A1-201ENST00000385257 85 ntBASIC0.98□□□□□ -2.25
SNRPA1P09661 MIR644A-201ENST00000385262 94 ntBASIC0.98□□□□□ -2.25
SNRPA1P09661 AC097635.1-201ENST00000450678 155 ntBASIC0.98□□□□□ -2.25
SNRPA1P09661 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.98□□□□□ -2.25
SNRPA1P09661 MIR3612-201ENST00000579753 87 ntBASIC0.98□□□□□ -2.25
SNRPA1P09661 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
SNRPA1P09661 AC006254.2-201ENST00000603259 279 ntBASIC0.98□□□□□ -2.25
SNRPA1P09661 Y_RNA.174-201ENST00000363781 105 ntBASIC0.97□□□□□ -2.25
SNRPA1P09661 MIR6835-201ENST00000621552 64 ntBASIC0.97□□□□□ -2.25
SNRPA1P09661 RNU6-1260P-201ENST00000362944 107 ntBASIC0.96□□□□□ -2.26
SNRPA1P09661 Y_RNA.221-201ENST00000364248 96 ntBASIC0.96□□□□□ -2.26
SNRPA1P09661 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
SNRPA1P09661 AC244098.3-201ENST00000424803 96 ntBASIC0.96□□□□□ -2.26
SNRPA1P09661 AC244505.6-201ENST00000452829 130 ntBASIC0.96□□□□□ -2.26
SNRPA1P09661 Y_RNA.648-201ENST00000459455 110 ntBASIC0.96□□□□□ -2.26
SNRPA1P09661 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.96□□□□□ -2.26
SNRPA1P09661 RNU6-957P-201ENST00000363652 99 ntBASIC0.95□□□□□ -2.26
SNRPA1P09661 RNU6-524P-201ENST00000384270 107 ntBASIC0.95□□□□□ -2.26
SNRPA1P09661 RNU6-519P-201ENST00000410590 108 ntBASIC0.95□□□□□ -2.26
SNRPA1P09661 AL606490.4-201ENST00000423117 127 ntBASIC0.95□□□□□ -2.26
SNRPA1P09661 RNU7-85P-201ENST00000458851 63 ntBASIC0.95□□□□□ -2.26
SNRPA1P09661 MIR6866-201ENST00000638146 69 ntBASIC0.95□□□□□ -2.26
SNRPA1P09661 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SNRPA1P09661 RNY1P4-201ENST00000384595 115 ntBASIC0.94□□□□□ -2.26
SNRPA1P09661 RNU6-466P-201ENST00000391224 103 ntBASIC0.94□□□□□ -2.26
SNRPA1P09661 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
SNRPA1P09661 RNA5SP480-201ENST00000516840 109 ntBASIC0.94□□□□□ -2.26
SNRPA1P09661 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
SNRPA1P09661 MIR4679-1-201ENST00000637619 75 ntBASIC0.94□□□□□ -2.26
SNRPA1P09661 SNORD115-24-201ENST00000363528 82 ntBASIC0.93□□□□□ -2.26
SNRPA1P09661 Y_RNA.283-201ENST00000364798 112 ntBASIC0.93□□□□□ -2.26
SNRPA1P09661 MIR508-201ENST00000384857 115 ntBASIC0.93□□□□□ -2.26
SNRPA1P09661 RNU6-402P-201ENST00000410678 103 ntBASIC0.93□□□□□ -2.26
SNRPA1P09661 RNU6-469P-201ENST00000516253 101 ntBASIC0.93□□□□□ -2.26
SNRPA1P09661 MIR4668-201ENST00000582284 70 ntBASIC0.93□□□□□ -2.26
SNRPA1P09661 Y_RNA.17-201ENST00000362433 111 ntBASIC0.92□□□□□ -2.26
SNRPA1P09661 SNORD116-22-201ENST00000384430 92 ntBASIC0.92□□□□□ -2.26
SNRPA1P09661 Y_RNA.558-201ENST00000384685 113 ntBASIC0.92□□□□□ -2.26
SNRPA1P09661 Y_RNA.593-201ENST00000410292 98 ntBASIC0.92□□□□□ -2.26
SNRPA1P09661 SNORD4B-201ENST00000459083 72 ntBASIC0.92□□□□□ -2.26
SNRPA1P09661 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
SNRPA1P09661 RNU6-267P-201ENST00000516714 103 ntBASIC0.92□□□□□ -2.26
SNRPA1P09661 TRDV1-202ENST00000621643 102 ntBASIC0.92□□□□□ -2.26
SNRPA1P09661 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SNRPA1P09661 MIR18A-201ENST00000362310 71 ntBASIC0.91□□□□□ -2.26
SNRPA1P09661 SNORD114-26-201ENST00000363543 72 ntBASIC0.91□□□□□ -2.26
SNRPA1P09661 RNA5SP222-201ENST00000411039 105 ntBASIC0.91□□□□□ -2.26
SNRPA1P09661 RNU6-762P-201ENST00000517107 102 ntBASIC0.91□□□□□ -2.26
SNRPA1P09661 MIR3678-201ENST00000578455 94 ntBASIC0.91□□□□□ -2.26
SNRPA1P09661 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.91□□□□□ -2.26
SNRPA1P09661 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.26
SNRPA1P09661 RNU6-75P-201ENST00000515944 104 ntBASIC0.9□□□□□ -2.27
SNRPA1P09661 RNU6-65P-201ENST00000516332 98 ntBASIC0.9□□□□□ -2.27
SNRPA1P09661 RNU7-161P-201ENST00000517289 62 ntBASIC0.9□□□□□ -2.27
SNRPA1P09661 MIR4536-1-201ENST00000583537 88 ntBASIC0.9□□□□□ -2.27
SNRPA1P09661 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SNRPA1P09661 SNORD18A-201ENST00000363753 72 ntBASIC0.89□□□□□ -2.27
SNRPA1P09661 RNU6-219P-201ENST00000364728 107 ntBASIC0.89□□□□□ -2.27
SNRPA1P09661 AL590095.2-201ENST00000604136 117 ntBASIC0.89□□□□□ -2.27
SNRPA1P09661 U6.100-201ENST00000636230 99 ntBASIC0.89□□□□□ -2.27
SNRPA1P09661 RNU4-32P-201ENST00000363404 141 ntBASIC0.88□□□□□ -2.27
SNRPA1P09661 SNORD73B-201ENST00000364394 72 ntBASIC0.88□□□□□ -2.27
SNRPA1P09661 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
SNRPA1P09661 Y_RNA.620-201ENST00000411009 88 ntBASIC0.88□□□□□ -2.27
SNRPA1P09661 RNU7-104P-201ENST00000459398 79 ntBASIC0.88□□□□□ -2.27
SNRPA1P09661 RNU6-1265P-201ENST00000516342 103 ntBASIC0.88□□□□□ -2.27
SNRPA1P09661 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
SNRPA1P09661 MIR6513-201ENST00000621188 64 ntBASIC0.88□□□□□ -2.27
SNRPA1P09661 MIR494-201ENST00000349529 81 ntBASIC0.87□□□□□ -2.27
SNRPA1P09661 RNA5SP403-201ENST00000363598 108 ntBASIC0.87□□□□□ -2.27
SNRPA1P09661 SNORD115-27-201ENST00000364430 82 ntBASIC0.87□□□□□ -2.27
SNRPA1P09661 SNORD28-201ENST00000384706 75 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 259.4 ms