Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-1260P-201ENST00000362944 107 ntBASIC0.96□□□□□ -2.26
RHOP08100 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
RHOP08100 RNY1P7-201ENST00000384743 110 ntBASIC0.96□□□□□ -2.26
RHOP08100 MIR516A2-201ENST00000384888 90 ntBASIC0.96□□□□□ -2.26
RHOP08100 MIR573-201ENST00000384964 99 ntBASIC0.96□□□□□ -2.26
RHOP08100 MIR516A1-201ENST00000385033 90 ntBASIC0.96□□□□□ -2.26
RHOP08100 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.96□□□□□ -2.26
RHOP08100 AC244505.6-201ENST00000452829 130 ntBASIC0.96□□□□□ -2.26
RHOP08100 AC002350.1-201ENST00000490759 375 ntBASIC0.96□□□□□ -2.26
RHOP08100 RNA5SP436-201ENST00000516020 115 ntBASIC0.96□□□□□ -2.26
RHOP08100 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
RHOP08100 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
RHOP08100 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.96□□□□□ -2.26
RHOP08100 Y_RNA.32-201ENST00000362589 110 ntBASIC0.95□□□□□ -2.26
RHOP08100 Y_RNA.648-201ENST00000459455 110 ntBASIC0.95□□□□□ -2.26
RHOP08100 RNU7-106P-201ENST00000459514 67 ntBASIC0.95□□□□□ -2.26
RHOP08100 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
RHOP08100 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RHOP08100 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RHOP08100 RNU6-243P-201ENST00000391140 107 ntBASIC0.94□□□□□ -2.26
RHOP08100 Y_RNA.190-201ENST00000363964 101 ntBASIC0.93□□□□□ -2.26
RHOP08100 RNA5SP245-201ENST00000364239 121 ntBASIC0.93□□□□□ -2.26
RHOP08100 RNU7-195P-201ENST00000458793 62 ntBASIC0.93□□□□□ -2.26
RHOP08100 Y_RNA.809-201ENST00000516058 95 ntBASIC0.93□□□□□ -2.26
RHOP08100 SNORA31.14-201ENST00000516728 116 ntBASIC0.93□□□□□ -2.26
RHOP08100 RNU6-294P-201ENST00000364999 102 ntBASIC0.92□□□□□ -2.26
RHOP08100 Y_RNA.558-201ENST00000384685 113 ntBASIC0.92□□□□□ -2.26
RHOP08100 RNU6-135P-201ENST00000516769 101 ntBASIC0.92□□□□□ -2.26
RHOP08100 AC026421.1-201ENST00000519101 163 ntBASIC0.92□□□□□ -2.26
RHOP08100 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
RHOP08100 MIR599-201ENST00000385069 95 ntBASIC0.91□□□□□ -2.26
RHOP08100 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
RHOP08100 AC006254.2-201ENST00000603259 279 ntBASIC0.91□□□□□ -2.26
RHOP08100 RNA5SP325-201ENST00000363756 130 ntBASIC0.9□□□□□ -2.27
RHOP08100 AL161932.1-201ENST00000437408 146 ntBASIC0.9□□□□□ -2.27
RHOP08100 RNU6-1265P-201ENST00000516342 103 ntBASIC0.9□□□□□ -2.27
RHOP08100 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
RHOP08100 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
RHOP08100 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
RHOP08100 Y_RNA.283-201ENST00000364798 112 ntBASIC0.89□□□□□ -2.27
RHOP08100 RNA5SP117-201ENST00000365294 118 ntBASIC0.89□□□□□ -2.27
RHOP08100 RNU4-45P-201ENST00000365469 141 ntBASIC0.89□□□□□ -2.27
RHOP08100 RNU6-466P-201ENST00000391224 103 ntBASIC0.89□□□□□ -2.27
RHOP08100 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
RHOP08100 AC244098.3-201ENST00000424803 96 ntBASIC0.89□□□□□ -2.27
RHOP08100 RNU7-85P-201ENST00000458851 63 ntBASIC0.89□□□□□ -2.27
RHOP08100 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
RHOP08100 MIR3612-201ENST00000579753 87 ntBASIC0.89□□□□□ -2.27
RHOP08100 AL353765.1-201ENST00000605514 183 ntBASIC0.89□□□□□ -2.27
RHOP08100 Y_RNA.205-201ENST00000364128 113 ntBASIC0.88□□□□□ -2.27
RHOP08100 SNORD116-22-201ENST00000384430 92 ntBASIC0.88□□□□□ -2.27
RHOP08100 RNU6-519P-201ENST00000410590 108 ntBASIC0.88□□□□□ -2.27
RHOP08100 SNORD4B-201ENST00000459083 72 ntBASIC0.88□□□□□ -2.27
RHOP08100 snoU13.11-201ENST00000459219 104 ntBASIC0.88□□□□□ -2.27
RHOP08100 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.88□□□□□ -2.27
RHOP08100 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.88□□□□□ -2.27
RHOP08100 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.88□□□□□ -2.27
RHOP08100 RNU6-675P-201ENST00000384236 104 ntBASIC0.87□□□□□ -2.27
RHOP08100 Y_RNA.609-201ENST00000410669 89 ntBASIC0.87□□□□□ -2.27
RHOP08100 MIR4668-201ENST00000582284 70 ntBASIC0.87□□□□□ -2.27
RHOP08100 RN7SL793P-201ENST00000583259 296 ntBASIC0.87□□□□□ -2.27
RHOP08100 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.87□□□□□ -2.27
RHOP08100 RNA5SP403-201ENST00000363598 108 ntBASIC0.86□□□□□ -2.27
RHOP08100 RNU6-219P-201ENST00000364728 107 ntBASIC0.86□□□□□ -2.27
RHOP08100 RNU6-1134P-201ENST00000365156 101 ntBASIC0.86□□□□□ -2.27
RHOP08100 RNU6-524P-201ENST00000384270 107 ntBASIC0.86□□□□□ -2.27
RHOP08100 MIR216A-201ENST00000385063 110 ntBASIC0.86□□□□□ -2.27
RHOP08100 Y_RNA.620-201ENST00000411009 88 ntBASIC0.86□□□□□ -2.27
RHOP08100 RNU6-75P-201ENST00000515944 104 ntBASIC0.86□□□□□ -2.27
RHOP08100 RNU6-469P-201ENST00000516253 101 ntBASIC0.86□□□□□ -2.27
RHOP08100 MIR4714-201ENST00000580728 77 ntBASIC0.86□□□□□ -2.27
RHOP08100 MIR4639-201ENST00000584938 69 ntBASIC0.86□□□□□ -2.27
RHOP08100 TRDV1-202ENST00000621643 102 ntBASIC0.86□□□□□ -2.27
RHOP08100 Y_RNA.17-201ENST00000362433 111 ntBASIC0.85□□□□□ -2.27
RHOP08100 RNU6-957P-201ENST00000363652 99 ntBASIC0.85□□□□□ -2.27
RHOP08100 RNU6-497P-201ENST00000365316 104 ntBASIC0.85□□□□□ -2.27
RHOP08100 RNY1P4-201ENST00000384595 115 ntBASIC0.85□□□□□ -2.27
RHOP08100 Y_RNA.593-201ENST00000410292 98 ntBASIC0.85□□□□□ -2.27
RHOP08100 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
RHOP08100 AC011195.1-201ENST00000578177 177 ntBASIC0.85□□□□□ -2.27
RHOP08100 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
RHOP08100 SNORD115-24-201ENST00000363528 82 ntBASIC0.84□□□□□ -2.27
RHOP08100 SNORD18A-201ENST00000363753 72 ntBASIC0.84□□□□□ -2.27
RHOP08100 RNU6-402P-201ENST00000410678 103 ntBASIC0.84□□□□□ -2.27
RHOP08100 MTRNR2L2-201ENST00000604882 87 ntBASIC0.84□□□□□ -2.27
RHOP08100 MIR4679-1-201ENST00000637619 75 ntBASIC0.84□□□□□ -2.27
RHOP08100 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
RHOP08100 RNU6-633P-201ENST00000362612 103 ntBASIC0.83□□□□□ -2.28
RHOP08100 SNORD28-201ENST00000384706 75 ntBASIC0.83□□□□□ -2.28
RHOP08100 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
RHOP08100 MIR644A-201ENST00000385262 94 ntBASIC0.83□□□□□ -2.28
RHOP08100 MIR1302-4-201ENST00000408701 150 ntBASIC0.83□□□□□ -2.28
RHOP08100 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
RHOP08100 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.83□□□□□ -2.28
RHOP08100 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.83□□□□□ -2.28
RHOP08100 RNU6-65P-201ENST00000516332 98 ntBASIC0.83□□□□□ -2.28
RHOP08100 MIR4536-1-201ENST00000583537 88 ntBASIC0.83□□□□□ -2.28
RHOP08100 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
RHOP08100 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
RHOP08100 RNU7-161P-201ENST00000517289 62 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms