Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-765P-201ENST00000516916 99 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 MIR151B-201ENST00000584249 96 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
HLA-DOAP06340 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 MIR6857-201ENST00000613267 93 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
HLA-DOAP06340 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DOAP06340 Y_RNA.56-201ENST00000362798 112 ntBASIC1.13□□□□□ -2.23
HLA-DOAP06340 RNU6-243P-201ENST00000391140 107 ntBASIC1.13□□□□□ -2.23
HLA-DOAP06340 RNU6-1254P-201ENST00000391266 104 ntBASIC1.13□□□□□ -2.23
HLA-DOAP06340 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DOAP06340 MIR548BB-201ENST00000626714 66 ntBASIC1.13□□□□□ -2.23
HLA-DOAP06340 RNU6-633P-201ENST00000362612 103 ntBASIC1.12□□□□□ -2.23
HLA-DOAP06340 RNU4-32P-201ENST00000363404 141 ntBASIC1.12□□□□□ -2.23
HLA-DOAP06340 RNU6-524P-201ENST00000384270 107 ntBASIC1.12□□□□□ -2.23
HLA-DOAP06340 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
HLA-DOAP06340 MIR520H-201ENST00000385126 88 ntBASIC1.12□□□□□ -2.23
HLA-DOAP06340 RNU1-119P-201ENST00000391122 165 ntBASIC1.12□□□□□ -2.23
HLA-DOAP06340 RNU6-75P-201ENST00000515944 104 ntBASIC1.12□□□□□ -2.23
HLA-DOAP06340 MIR5588-201ENST00000581890 63 ntBASIC1.12□□□□□ -2.23
HLA-DOAP06340 Y_RNA.32-201ENST00000362589 110 ntBASIC1.11□□□□□ -2.23
HLA-DOAP06340 RNU6-509P-201ENST00000363519 107 ntBASIC1.11□□□□□ -2.23
HLA-DOAP06340 RNU6-979P-201ENST00000383896 107 ntBASIC1.11□□□□□ -2.23
HLA-DOAP06340 MIR942-201ENST00000401111 86 ntBASIC1.11□□□□□ -2.23
HLA-DOAP06340 Y_RNA.648-201ENST00000459455 110 ntBASIC1.11□□□□□ -2.23
HLA-DOAP06340 MIR548H5-201ENST00000580314 60 ntBASIC1.11□□□□□ -2.23
HLA-DOAP06340 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
HLA-DOAP06340 Y_RNA.283-201ENST00000364798 112 ntBASIC1.1□□□□□ -2.23
HLA-DOAP06340 RNU6-132P-201ENST00000383863 107 ntBASIC1.1□□□□□ -2.23
HLA-DOAP06340 MIR489-201ENST00000384923 84 ntBASIC1.1□□□□□ -2.23
HLA-DOAP06340 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
HLA-DOAP06340 AC067940.1-201ENST00000458411 300 ntBASIC1.1□□□□□ -2.23
HLA-DOAP06340 Y_RNA.809-201ENST00000516058 95 ntBASIC1.1□□□□□ -2.23
HLA-DOAP06340 SNORA31.14-201ENST00000516728 116 ntBASIC1.1□□□□□ -2.23
HLA-DOAP06340 RNU6-787P-201ENST00000384032 107 ntBASIC1.09□□□□□ -2.23
HLA-DOAP06340 RNA5SP292-201ENST00000390974 118 ntBASIC1.09□□□□□ -2.23
HLA-DOAP06340 RNU6-1223P-201ENST00000517124 104 ntBASIC1.09□□□□□ -2.23
HLA-DOAP06340 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
HLA-DOAP06340 AC006160.2-201ENST00000637708 154 ntBASIC1.09□□□□□ -2.23
HLA-DOAP06340 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.09□□□□□ -2.23
HLA-DOAP06340 MIRLET7F1-201ENST00000362202 87 ntBASIC1.08□□□□□ -2.24
HLA-DOAP06340 Y_RNA.221-201ENST00000364248 96 ntBASIC1.08□□□□□ -2.24
HLA-DOAP06340 RNU6-1276P-201ENST00000365372 104 ntBASIC1.08□□□□□ -2.24
HLA-DOAP06340 MIR599-201ENST00000385069 95 ntBASIC1.08□□□□□ -2.24
HLA-DOAP06340 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.08□□□□□ -2.24
HLA-DOAP06340 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
HLA-DOAP06340 MIR4536-1-201ENST00000583537 88 ntBASIC1.08□□□□□ -2.24
HLA-DOAP06340 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DOAP06340 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
HLA-DOAP06340 MIR618-201ENST00000385287 98 ntBASIC1.07□□□□□ -2.24
HLA-DOAP06340 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DOAP06340 TRDV1-202ENST00000621643 102 ntBASIC1.07□□□□□ -2.24
HLA-DOAP06340 uc_338.16-201ENST00000621804 95 ntBASIC1.07□□□□□ -2.24
HLA-DOAP06340 RNU6-228P-201ENST00000362700 106 ntBASIC1.06□□□□□ -2.24
HLA-DOAP06340 RNU6-1260P-201ENST00000362944 107 ntBASIC1.06□□□□□ -2.24
HLA-DOAP06340 MIR644A-201ENST00000385262 94 ntBASIC1.06□□□□□ -2.24
HLA-DOAP06340 SNORD90-201ENST00000391145 111 ntBASIC1.06□□□□□ -2.24
HLA-DOAP06340 AC022709.1-201ENST00000615967 87 ntBASIC1.06□□□□□ -2.24
HLA-DOAP06340 U6.100-201ENST00000636230 99 ntBASIC1.06□□□□□ -2.24
HLA-DOAP06340 Y_RNA.313-201ENST00000365095 103 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 MIR519C-201ENST00000385053 87 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 MIR519A1-201ENST00000385257 85 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 SNORD105-201ENST00000386910 85 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 RNU6-466P-201ENST00000391224 103 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 RNA5SP225-201ENST00000410874 135 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 FABP5P4-201ENST00000437203 171 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 AC002350.1-201ENST00000490759 375 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 RNU6-65P-201ENST00000516332 98 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 AP003327.1-201ENST00000529684 127 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 AC138907.6-201ENST00000568401 126 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 AC138869.1-201ENST00000568623 124 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 MIR4698-201ENST00000577795 80 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 AL136317.1-201ENST00000612653 226 ntBASIC1.05□□□□□ -2.24
HLA-DOAP06340 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
HLA-DOAP06340 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
HLA-DOAP06340 RNU6-1124P-201ENST00000384169 107 ntBASIC1.04□□□□□ -2.24
HLA-DOAP06340 RNU6-242P-201ENST00000384359 107 ntBASIC1.04□□□□□ -2.24
HLA-DOAP06340 AC097635.1-201ENST00000450678 155 ntBASIC1.04□□□□□ -2.24
HLA-DOAP06340 U7.7-201ENST00000459276 60 ntBASIC1.04□□□□□ -2.24
HLA-DOAP06340 RNU6-1110P-201ENST00000516462 101 ntBASIC1.04□□□□□ -2.24
HLA-DOAP06340 RNU7-10P-201ENST00000607194 63 ntBASIC1.04□□□□□ -2.24
HLA-DOAP06340 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DOAP06340 Y_RNA.437-201ENST00000384113 113 ntBASIC1.03□□□□□ -2.24
HLA-DOAP06340 RNU7-171P-201ENST00000459581 62 ntBASIC1.03□□□□□ -2.24
HLA-DOAP06340 MIR3064-201ENST00000581130 66 ntBASIC1.03□□□□□ -2.24
HLA-DOAP06340 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HLA-DOAP06340 SNORD78.1-201ENST00000390866 65 ntBASIC1.02□□□□□ -2.25
HLA-DOAP06340 MIR1255A-201ENST00000408338 113 ntBASIC1.02□□□□□ -2.25
HLA-DOAP06340 AC244505.6-201ENST00000452829 130 ntBASIC1.02□□□□□ -2.25
HLA-DOAP06340 SNORA18.5-201ENST00000516616 101 ntBASIC1.02□□□□□ -2.25
HLA-DOAP06340 CYP3A137P-201ENST00000562436 69 ntBASIC1.02□□□□□ -2.25
HLA-DOAP06340 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
HLA-DOAP06340 SNORD115-24-201ENST00000363528 82 ntBASIC1.01□□□□□ -2.25
HLA-DOAP06340 RNU6-652P-201ENST00000365488 107 ntBASIC1.01□□□□□ -2.25
HLA-DOAP06340 RNU6-811P-201ENST00000384069 107 ntBASIC1.01□□□□□ -2.25
HLA-DOAP06340 RNU6-939P-201ENST00000384634 107 ntBASIC1.01□□□□□ -2.25
HLA-DOAP06340 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
HLA-DOAP06340 AC093729.1-201ENST00000513074 128 ntBASIC1.01□□□□□ -2.25
HLA-DOAP06340 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms