Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC012531.4-201ENST00000616509 177 ntBASIC0.49□□□□□ -2.33
HLA-DQA2P01906 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
HLA-DQA2P01906 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.49□□□□□ -2.33
HLA-DQA2P01906 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HLA-DQA2P01906 SNORD45B-201ENST00000364617 72 ntBASIC0.48□□□□□ -2.33
HLA-DQA2P01906 MIR519A1-201ENST00000385257 85 ntBASIC0.48□□□□□ -2.33
HLA-DQA2P01906 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.48□□□□□ -2.33
HLA-DQA2P01906 RN7SKP12-201ENST00000516275 143 ntBASIC0.48□□□□□ -2.33
HLA-DQA2P01906 AC067863.3-201ENST00000624172 122 ntBASIC0.48□□□□□ -2.33
HLA-DQA2P01906 Y_RNA.95-201ENST00000363079 95 ntBASIC0.47□□□□□ -2.33
HLA-DQA2P01906 MIR590-201ENST00000385008 97 ntBASIC0.47□□□□□ -2.33
HLA-DQA2P01906 RNY4P18-201ENST00000391107 89 ntBASIC0.47□□□□□ -2.33
HLA-DQA2P01906 Y_RNA.601-201ENST00000410500 113 ntBASIC0.47□□□□□ -2.33
HLA-DQA2P01906 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
HLA-DQA2P01906 MIR103A1-201ENST00000362165 78 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 Y_RNA.118-201ENST00000363300 101 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 RNU6-1125P-201ENST00000363601 107 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 RNU6-1244P-201ENST00000363614 108 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 RNU6-726P-201ENST00000364680 107 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 SNORA51.5-201ENST00000384126 131 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 RNU6-480P-201ENST00000384332 107 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 RNU6-904P-201ENST00000516206 101 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 RNU6-109P-201ENST00000516364 107 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 RNU6-184P-201ENST00000516514 107 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 AC025521.1-201ENST00000621624 286 ntBASIC0.46□□□□□ -2.34
HLA-DQA2P01906 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
HLA-DQA2P01906 Y_RNA.10-201ENST00000362371 110 ntBASIC0.45□□□□□ -2.34
HLA-DQA2P01906 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
HLA-DQA2P01906 Y_RNA.508-201ENST00000384502 114 ntBASIC0.45□□□□□ -2.34
HLA-DQA2P01906 SCARNA23-201ENST00000516060 130 ntBASIC0.45□□□□□ -2.34
HLA-DQA2P01906 MIR4752-201ENST00000579672 72 ntBASIC0.45□□□□□ -2.34
HLA-DQA2P01906 MIR4777-201ENST00000583710 86 ntBASIC0.45□□□□□ -2.34
HLA-DQA2P01906 RNU6-957P-201ENST00000363652 99 ntBASIC0.44□□□□□ -2.34
HLA-DQA2P01906 RNU6-756P-201ENST00000383997 107 ntBASIC0.44□□□□□ -2.34
HLA-DQA2P01906 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.44□□□□□ -2.34
HLA-DQA2P01906 snoU13.18-201ENST00000459483 104 ntBASIC0.44□□□□□ -2.34
HLA-DQA2P01906 AC103810.7-201ENST00000607821 91 ntBASIC0.44□□□□□ -2.34
HLA-DQA2P01906 MIR450A1-201ENST00000362262 91 ntBASIC0.43□□□□□ -2.34
HLA-DQA2P01906 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
HLA-DQA2P01906 SNORA63.4-201ENST00000362763 126 ntBASIC0.43□□□□□ -2.34
HLA-DQA2P01906 Y_RNA.355-201ENST00000365462 98 ntBASIC0.43□□□□□ -2.34
HLA-DQA2P01906 snoU13.11-201ENST00000459219 104 ntBASIC0.43□□□□□ -2.34
HLA-DQA2P01906 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 Y_RNA.78-201ENST00000362970 110 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 RNU6-215P-201ENST00000365169 102 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 RNU6-813P-201ENST00000384691 107 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 RNU7-13P-201ENST00000516413 62 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 MIR3920-201ENST00000581751 86 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 AC022709.1-201ENST00000615967 87 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 MIR6515-201ENST00000619843 57 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 TRDV1-202ENST00000621643 102 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.42□□□□□ -2.34
HLA-DQA2P01906 RNU2-59P-201ENST00000410482 191 ntBASIC0.41□□□□□ -2.34
HLA-DQA2P01906 RNU6-537P-201ENST00000517277 103 ntBASIC0.41□□□□□ -2.34
HLA-DQA2P01906 AL513043.2-201ENST00000573941 143 ntBASIC0.41□□□□□ -2.34
HLA-DQA2P01906 MIR4439-201ENST00000583746 80 ntBASIC0.41□□□□□ -2.34
HLA-DQA2P01906 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
HLA-DQA2P01906 SNORD41.1-201ENST00000391000 69 ntBASIC0.4□□□□□ -2.35
HLA-DQA2P01906 RNU6-269P-201ENST00000391077 97 ntBASIC0.4□□□□□ -2.35
HLA-DQA2P01906 RNU6-644P-201ENST00000391155 98 ntBASIC0.4□□□□□ -2.35
HLA-DQA2P01906 RNU6-1265P-201ENST00000516342 103 ntBASIC0.4□□□□□ -2.35
HLA-DQA2P01906 RNU6-919P-201ENST00000516731 104 ntBASIC0.4□□□□□ -2.35
HLA-DQA2P01906 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.4□□□□□ -2.35
HLA-DQA2P01906 RNU6-1126P-201ENST00000384002 107 ntBASIC0.39□□□□□ -2.35
HLA-DQA2P01906 RNU6-44P-201ENST00000384045 107 ntBASIC0.39□□□□□ -2.35
HLA-DQA2P01906 RNU6-1113P-201ENST00000384348 107 ntBASIC0.39□□□□□ -2.35
HLA-DQA2P01906 AL031737.1-201ENST00000450125 223 ntBASIC0.39□□□□□ -2.35
HLA-DQA2P01906 RNA5SP436-201ENST00000516020 115 ntBASIC0.39□□□□□ -2.35
HLA-DQA2P01906 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
HLA-DQA2P01906 U6.100-201ENST00000636230 99 ntBASIC0.39□□□□□ -2.35
HLA-DQA2P01906 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
HLA-DQA2P01906 AL035461.1-201ENST00000421490 332 ntBASIC0.38□□□□□ -2.35
HLA-DQA2P01906 MIR6755-201ENST00000619993 66 ntBASIC0.38□□□□□ -2.35
HLA-DQA2P01906 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
HLA-DQA2P01906 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
HLA-DQA2P01906 RNU6-766P-201ENST00000362478 107 ntBASIC0.37□□□□□ -2.35
HLA-DQA2P01906 RNU6-466P-201ENST00000391224 103 ntBASIC0.37□□□□□ -2.35
HLA-DQA2P01906 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.37□□□□□ -2.35
HLA-DQA2P01906 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.37□□□□□ -2.35
HLA-DQA2P01906 AL162376.1-201ENST00000624117 175 ntBASIC0.37□□□□□ -2.35
HLA-DQA2P01906 Y_RNA.283-201ENST00000364798 112 ntBASIC0.36□□□□□ -2.35
HLA-DQA2P01906 MIR598-201ENST00000384868 97 ntBASIC0.36□□□□□ -2.35
HLA-DQA2P01906 MIR216A-201ENST00000385063 110 ntBASIC0.36□□□□□ -2.35
HLA-DQA2P01906 RNU7-61P-201ENST00000515897 61 ntBASIC0.36□□□□□ -2.35
HLA-DQA2P01906 RNU6-287P-201ENST00000516230 98 ntBASIC0.36□□□□□ -2.35
HLA-DQA2P01906 MIR548AG2-201ENST00000581228 64 ntBASIC0.36□□□□□ -2.35
HLA-DQA2P01906 RNA5SP62-201ENST00000363457 110 ntBASIC0.35□□□□□ -2.35
HLA-DQA2P01906 RNU6-815P-201ENST00000384080 113 ntBASIC0.35□□□□□ -2.35
HLA-DQA2P01906 RNU6-162P-201ENST00000516228 103 ntBASIC0.35□□□□□ -2.35
HLA-DQA2P01906 RNU6-1232P-201ENST00000516299 86 ntBASIC0.35□□□□□ -2.35
HLA-DQA2P01906 Y_RNA.705-201ENST00000516862 110 ntBASIC0.35□□□□□ -2.35
HLA-DQA2P01906 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.35□□□□□ -2.35
HLA-DQA2P01906 SNORA70.25-201ENST00000612741 95 ntBASIC0.35□□□□□ -2.35
HLA-DQA2P01906 Y_RNA.107-201ENST00000363190 121 ntBASIC0.34□□□□□ -2.36
HLA-DQA2P01906 Y_RNA.596-201ENST00000410462 109 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms