Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
CPSF4O95639 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.49□□□□□ -2.49
CPSF4O95639 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.49□□□□□ -2.49
CPSF4O95639 RNU6-735P-201ENST00000410612 107 ntBASIC-0.49□□□□□ -2.49
CPSF4O95639 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.49□□□□□ -2.49
CPSF4O95639 MIR3163-201ENST00000581592 73 ntBASIC-0.49□□□□□ -2.49
CPSF4O95639 U6.100-201ENST00000636230 99 ntBASIC-0.49□□□□□ -2.49
CPSF4O95639 MIR1255B1-201ENST00000636325 63 ntBASIC-0.49□□□□□ -2.49
CPSF4O95639 SNORD36A-201ENST00000362874 73 ntBASIC-0.5□□□□□ -2.49
CPSF4O95639 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.5□□□□□ -2.49
CPSF4O95639 RNU6-480P-201ENST00000384332 107 ntBASIC-0.5□□□□□ -2.49
CPSF4O95639 RNU6-455P-201ENST00000384681 107 ntBASIC-0.5□□□□□ -2.49
CPSF4O95639 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
CPSF4O95639 RNU6-243P-201ENST00000391140 107 ntBASIC-0.5□□□□□ -2.49
CPSF4O95639 RNU6-284P-201ENST00000411105 106 ntBASIC-0.5□□□□□ -2.49
CPSF4O95639 IGKV1-22-201ENST00000524313 326 ntBASIC-0.5□□□□□ -2.49
CPSF4O95639 AC130289.1-201ENST00000577321 73 ntBASIC-0.5□□□□□ -2.49
CPSF4O95639 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.51□□□□□ -2.49
CPSF4O95639 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.51□□□□□ -2.49
CPSF4O95639 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.51□□□□□ -2.49
CPSF4O95639 RNA5SP25-201ENST00000410815 110 ntBASIC-0.51□□□□□ -2.49
CPSF4O95639 AC114755.3-201ENST00000481111 251 ntBASIC-0.51□□□□□ -2.49
CPSF4O95639 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.51□□□□□ -2.49
CPSF4O95639 MIR3121-201ENST00000579680 77 ntBASIC-0.51□□□□□ -2.49
CPSF4O95639 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.51□□□□□ -2.49
CPSF4O95639 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 MT-TQ-201ENST00000387372 72 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 SNORA7.5-201ENST00000410672 110 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 SPINT5P-201ENST00000448174 155 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 AP001328.1-201ENST00000528550 176 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 MIR4432-201ENST00000581823 84 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 AC072026.1-201ENST00000605023 201 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 AC141273.2-201ENST00000618989 130 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 U4.1-201ENST00000620349 87 ntBASIC-0.52□□□□□ -2.49
CPSF4O95639 RNU6-957P-201ENST00000363652 99 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 SNORD114-15-201ENST00000364687 72 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 RNU4-11P-201ENST00000365287 132 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 AL118496.2-201ENST00000448300 230 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 RNA5SP395-201ENST00000516567 118 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 RNA5SP66-201ENST00000517178 101 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 AC007012.1-201ENST00000567192 175 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 AL391099.1-201ENST00000624635 187 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 AL512310.12-203ENST00000640543 90 ntBASIC-0.53□□□□□ -2.49
CPSF4O95639 MIR20A-201ENST00000362279 71 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 SNORD95.1-201ENST00000364099 68 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 MIR652-201ENST00000385278 98 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 MIR759-201ENST00000390224 91 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 RNU6-460P-201ENST00000391158 108 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 RNU7-197P-201ENST00000458836 62 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 RNU6-327P-201ENST00000516270 127 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 RNU6-90P-201ENST00000606352 106 ntBASIC-0.54□□□□□ -2.5
CPSF4O95639 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.55□□□□□ -2.5
CPSF4O95639 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.55□□□□□ -2.5
CPSF4O95639 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.55□□□□□ -2.5
CPSF4O95639 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.55□□□□□ -2.5
CPSF4O95639 RNU6-915P-201ENST00000364943 103 ntBASIC-0.55□□□□□ -2.5
CPSF4O95639 MIR9-2-201ENST00000384838 87 ntBASIC-0.55□□□□□ -2.5
CPSF4O95639 MIR548G-201ENST00000408442 89 ntBASIC-0.55□□□□□ -2.5
CPSF4O95639 RNU6-138P-201ENST00000515952 107 ntBASIC-0.55□□□□□ -2.5
CPSF4O95639 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 SNORD38.1-201ENST00000363863 68 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 MIR1263-201ENST00000408324 86 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 AC244090.1-201ENST00000441884 93 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 RN7SKP19-201ENST00000516016 252 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 AP000676.1-201ENST00000533307 52 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 AP002392.1-201ENST00000537692 208 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 MIR4503-201ENST00000582187 83 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 MIR6086-201ENST00000638065 55 ntBASIC-0.56□□□□□ -2.5
CPSF4O95639 RNU6-363P-201ENST00000362895 105 ntBASIC-0.57□□□□□ -2.5
CPSF4O95639 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.57□□□□□ -2.5
CPSF4O95639 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.57□□□□□ -2.5
CPSF4O95639 MIR548D2-201ENST00000384955 97 ntBASIC-0.57□□□□□ -2.5
CPSF4O95639 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.57□□□□□ -2.5
CPSF4O95639 AL353813.1-201ENST00000440700 253 ntBASIC-0.57□□□□□ -2.5
CPSF4O95639 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.57□□□□□ -2.5
CPSF4O95639 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 RNU6-151P-201ENST00000364158 107 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 RNY4P3-201ENST00000365254 95 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 SNORD101-201ENST00000384027 73 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 RNU6-900P-201ENST00000384498 102 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 RNA5SP136-201ENST00000410906 107 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 snoU13.19-201ENST00000459148 104 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 RNU6-861P-201ENST00000516745 106 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms