Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-132P-201ENST00000383863 107 ntBASIC1.35□□□□□ -2.19
CNOT4O95628 RNU6-994P-201ENST00000410507 111 ntBASIC1.35□□□□□ -2.19
CNOT4O95628 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
CNOT4O95628 RNU6-448P-201ENST00000517052 107 ntBASIC1.35□□□□□ -2.19
CNOT4O95628 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.35□□□□□ -2.19
CNOT4O95628 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CNOT4O95628 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CNOT4O95628 RNU6-1260P-201ENST00000362944 107 ntBASIC1.34□□□□□ -2.19
CNOT4O95628 RNU6-364P-201ENST00000384387 107 ntBASIC1.34□□□□□ -2.19
CNOT4O95628 AL450471.1-201ENST00000447509 127 ntBASIC1.34□□□□□ -2.19
CNOT4O95628 SNORA18.5-201ENST00000516616 101 ntBASIC1.34□□□□□ -2.19
CNOT4O95628 AL157834.3-201ENST00000615543 103 ntBASIC1.34□□□□□ -2.19
CNOT4O95628 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CNOT4O95628 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
CNOT4O95628 MIRLET7F1-201ENST00000362202 87 ntBASIC1.33□□□□□ -2.2
CNOT4O95628 RNU6-478P-201ENST00000363904 110 ntBASIC1.33□□□□□ -2.2
CNOT4O95628 Y_RNA.491-201ENST00000384417 107 ntBASIC1.33□□□□□ -2.2
CNOT4O95628 MIR938-201ENST00000401216 83 ntBASIC1.33□□□□□ -2.2
CNOT4O95628 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.33□□□□□ -2.2
CNOT4O95628 AC097635.1-201ENST00000450678 155 ntBASIC1.33□□□□□ -2.2
CNOT4O95628 AC027335.2-201ENST00000624030 375 ntBASIC1.33□□□□□ -2.2
CNOT4O95628 RNU6-776P-201ENST00000364403 104 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 RNU6-1022P-201ENST00000365049 104 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 RNU6-42P-201ENST00000384165 107 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 RNU6-557P-201ENST00000516842 110 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 AC138907.6-201ENST00000568401 126 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 AC138869.1-201ENST00000568623 124 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 AL078603.1-201ENST00000603824 313 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 TRDV1-202ENST00000621643 102 ntBASIC1.32□□□□□ -2.2
CNOT4O95628 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CNOT4O95628 RNU6-369P-201ENST00000362515 102 ntBASIC1.31□□□□□ -2.2
CNOT4O95628 SNORA63.2-201ENST00000362603 126 ntBASIC1.31□□□□□ -2.2
CNOT4O95628 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CNOT4O95628 AL606490.4-201ENST00000423117 127 ntBASIC1.31□□□□□ -2.2
CNOT4O95628 RNU7-102P-201ENST00000458948 62 ntBASIC1.31□□□□□ -2.2
CNOT4O95628 FGF7P7-201ENST00000514120 227 ntBASIC1.31□□□□□ -2.2
CNOT4O95628 RNU6-977P-201ENST00000516411 103 ntBASIC1.31□□□□□ -2.2
CNOT4O95628 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
CNOT4O95628 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CNOT4O95628 RNU6-291P-201ENST00000384720 107 ntBASIC1.3□□□□□ -2.2
CNOT4O95628 RNU6-535P-201ENST00000384722 107 ntBASIC1.3□□□□□ -2.2
CNOT4O95628 MIR599-201ENST00000385069 95 ntBASIC1.3□□□□□ -2.2
CNOT4O95628 SNORD12-201ENST00000391002 90 ntBASIC1.3□□□□□ -2.2
CNOT4O95628 Y_RNA.660-201ENST00000516002 120 ntBASIC1.3□□□□□ -2.2
CNOT4O95628 MIR4804-201ENST00000581683 73 ntBASIC1.3□□□□□ -2.2
CNOT4O95628 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
CNOT4O95628 RNU6-1094P-201ENST00000362416 104 ntBASIC1.29□□□□□ -2.2
CNOT4O95628 MIR7-2-201ENST00000384970 110 ntBASIC1.29□□□□□ -2.2
CNOT4O95628 MIR100-201ENST00000385259 80 ntBASIC1.29□□□□□ -2.2
CNOT4O95628 MIR1304-201ENST00000408243 91 ntBASIC1.29□□□□□ -2.2
CNOT4O95628 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
CNOT4O95628 RNA5SP220-201ENST00000516298 104 ntBASIC1.29□□□□□ -2.2
CNOT4O95628 MIR6734-201ENST00000621166 68 ntBASIC1.29□□□□□ -2.2
CNOT4O95628 MIR1-1-201ENST00000362147 71 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 RNU6-161P-201ENST00000363051 106 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 RNU6-686P-201ENST00000364839 107 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 RNU1-119P-201ENST00000391122 165 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 RNU6-380P-201ENST00000410207 107 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 AL354695.1-201ENST00000427935 228 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 AC067940.1-201ENST00000458411 300 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 RNU6-1108P-201ENST00000516308 104 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 RNA5SP102-201ENST00000516865 106 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 AC008608.1-201ENST00000603910 127 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 U6.100-201ENST00000636230 99 ntBASIC1.28□□□□□ -2.2
CNOT4O95628 MIRLET7A1-201ENST00000362295 80 ntBASIC1.27□□□□□ -2.21
CNOT4O95628 RNA5SP245-201ENST00000364239 121 ntBASIC1.27□□□□□ -2.21
CNOT4O95628 MIR889-201ENST00000401280 79 ntBASIC1.27□□□□□ -2.21
CNOT4O95628 MIR1323-201ENST00000408090 73 ntBASIC1.27□□□□□ -2.21
CNOT4O95628 RNU7-56P-201ENST00000458744 62 ntBASIC1.27□□□□□ -2.21
CNOT4O95628 AC145423.2-201ENST00000610631 239 ntBASIC1.27□□□□□ -2.21
CNOT4O95628 Y_RNA.239-201ENST00000364444 113 ntBASIC1.26□□□□□ -2.21
CNOT4O95628 SNORD101-201ENST00000384027 73 ntBASIC1.26□□□□□ -2.21
CNOT4O95628 MIR520F-201ENST00000384824 87 ntBASIC1.26□□□□□ -2.21
CNOT4O95628 MIR320A-201ENST00000385302 82 ntBASIC1.26□□□□□ -2.21
CNOT4O95628 RNU6-664P-201ENST00000362381 107 ntBASIC1.25□□□□□ -2.21
CNOT4O95628 SNORD77.2-201ENST00000391045 68 ntBASIC1.25□□□□□ -2.21
CNOT4O95628 MIR1827-201ENST00000408549 66 ntBASIC1.25□□□□□ -2.21
CNOT4O95628 AC244505.6-201ENST00000452829 130 ntBASIC1.25□□□□□ -2.21
CNOT4O95628 RNU6-1265P-201ENST00000516342 103 ntBASIC1.25□□□□□ -2.21
CNOT4O95628 MIR4696-201ENST00000581431 70 ntBASIC1.25□□□□□ -2.21
CNOT4O95628 MIR6078-201ENST00000611069 100 ntBASIC1.25□□□□□ -2.21
CNOT4O95628 U7.4-201ENST00000614961 63 ntBASIC1.25□□□□□ -2.21
CNOT4O95628 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CNOT4O95628 RNU6-1229P-201ENST00000364295 107 ntBASIC1.24□□□□□ -2.21
CNOT4O95628 Y_RNA.264-201ENST00000364665 102 ntBASIC1.24□□□□□ -2.21
CNOT4O95628 SNORD90-201ENST00000391145 111 ntBASIC1.24□□□□□ -2.21
CNOT4O95628 Y_RNA.596-201ENST00000410462 109 ntBASIC1.24□□□□□ -2.21
CNOT4O95628 AC002429.1-201ENST00000437672 148 ntBASIC1.24□□□□□ -2.21
CNOT4O95628 MTRNR2L2-201ENST00000604882 87 ntBASIC1.24□□□□□ -2.21
CNOT4O95628 RNU6-208P-201ENST00000362431 107 ntBASIC1.23□□□□□ -2.21
CNOT4O95628 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
CNOT4O95628 RNU6-1051P-201ENST00000365471 102 ntBASIC1.23□□□□□ -2.21
CNOT4O95628 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
CNOT4O95628 RMST_2.1-201ENST00000617263 136 ntBASIC1.23□□□□□ -2.21
CNOT4O95628 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CNOT4O95628 RNU5F-1-201ENST00000362507 117 ntBASIC1.22□□□□□ -2.21
CNOT4O95628 SNORD114-22-201ENST00000365423 72 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms