Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC096720.1-201ENST00000604441 183 ntBASIC0.4□□□□□ -2.35
CSPG5O95196 Y_RNA.342-201ENST00000365352 113 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 RNU6-880P-201ENST00000384526 107 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 MIR516A2-201ENST00000384888 90 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 MIR516A1-201ENST00000385033 90 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 RNU6-1168P-201ENST00000390831 104 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 RNU6-1154P-201ENST00000391001 104 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 RNU7-104P-201ENST00000459398 79 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 Y_RNA.809-201ENST00000516058 95 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 RNU6-62P-201ENST00000516526 102 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 RNU6-90P-201ENST00000606352 106 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.39□□□□□ -2.35
CSPG5O95196 AC091304.10-201ENST00000641554 121 ntBASIC0.39□□□□□ -2.35
CSPG5O95196 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
CSPG5O95196 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.38□□□□□ -2.35
CSPG5O95196 RNA5SP63-201ENST00000391225 112 ntBASIC0.38□□□□□ -2.35
CSPG5O95196 RNU4-61P-201ENST00000411243 107 ntBASIC0.38□□□□□ -2.35
CSPG5O95196 MIR5009-201ENST00000578736 100 ntBASIC0.38□□□□□ -2.35
CSPG5O95196 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.38□□□□□ -2.35
CSPG5O95196 MIR103A1-201ENST00000362165 78 ntBASIC0.37□□□□□ -2.35
CSPG5O95196 RNA5SP403-201ENST00000363598 108 ntBASIC0.37□□□□□ -2.35
CSPG5O95196 RNA5SP205-201ENST00000364653 136 ntBASIC0.37□□□□□ -2.35
CSPG5O95196 Y_RNA.281-201ENST00000364774 94 ntBASIC0.37□□□□□ -2.35
CSPG5O95196 RNU6-476P-201ENST00000384726 107 ntBASIC0.37□□□□□ -2.35
CSPG5O95196 MIR519A1-201ENST00000385257 85 ntBASIC0.37□□□□□ -2.35
CSPG5O95196 MIR4694-201ENST00000578534 80 ntBASIC0.37□□□□□ -2.35
CSPG5O95196 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 Y_RNA.377-201ENST00000365644 108 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 RNU6-1144P-201ENST00000384247 104 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 RNU6-524P-201ENST00000384270 107 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 MIR548L-201ENST00000408303 86 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 RNU6-1064P-201ENST00000410626 104 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 AL606753.1-201ENST00000427435 87 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 AC069271.1-201ENST00000445577 156 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.36□□□□□ -2.35
CSPG5O95196 RNU6-313P-201ENST00000516317 112 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 RNU6-479P-201ENST00000516348 105 ntBASIC0.36□□□□□ -2.35
CSPG5O95196 Y_RNA.57-201ENST00000362806 113 ntBASIC0.35□□□□□ -2.35
CSPG5O95196 RNY3P2-201ENST00000362918 102 ntBASIC0.35□□□□□ -2.35
CSPG5O95196 RNU6-832P-201ENST00000363319 107 ntBASIC0.35□□□□□ -2.35
CSPG5O95196 Y_RNA.173-201ENST00000363776 113 ntBASIC0.35□□□□□ -2.35
CSPG5O95196 SNORD113-1-201ENST00000365321 69 ntBASIC0.35□□□□□ -2.35
CSPG5O95196 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
CSPG5O95196 MIR3613-201ENST00000579844 87 ntBASIC0.35□□□□□ -2.35
CSPG5O95196 MIR6129-201ENST00000616087 109 ntBASIC0.35□□□□□ -2.35
CSPG5O95196 RNU6-1260P-201ENST00000362944 107 ntBASIC0.34□□□□□ -2.36
CSPG5O95196 RNU6-1099P-201ENST00000363533 107 ntBASIC0.34□□□□□ -2.36
CSPG5O95196 RNU6-726P-201ENST00000364680 107 ntBASIC0.34□□□□□ -2.36
CSPG5O95196 RNU6-1107P-201ENST00000364817 104 ntBASIC0.34□□□□□ -2.36
CSPG5O95196 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.34□□□□□ -2.36
CSPG5O95196 Y_RNA.659-201ENST00000515994 113 ntBASIC0.34□□□□□ -2.36
CSPG5O95196 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CSPG5O95196 RNU6-1163P-201ENST00000364516 107 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 Y_RNA.323-201ENST00000365157 109 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 RNU6-1014P-201ENST00000383940 103 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 RNU2-59P-201ENST00000410482 191 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 RNU2-51P-201ENST00000410708 197 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 RNU6-412P-201ENST00000516434 106 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 RNU6-789P-201ENST00000517105 102 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 AC141557.1-201ENST00000540982 400 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 MIR4752-201ENST00000579672 72 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 MIR4636-201ENST00000582271 80 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 AC067863.3-201ENST00000624172 122 ntBASIC0.33□□□□□ -2.36
CSPG5O95196 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
CSPG5O95196 RNU6-1126P-201ENST00000384002 107 ntBASIC0.32□□□□□ -2.36
CSPG5O95196 SNORA19-201ENST00000384737 128 ntBASIC0.32□□□□□ -2.36
CSPG5O95196 RNU6-1254P-201ENST00000391266 104 ntBASIC0.32□□□□□ -2.36
CSPG5O95196 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.32□□□□□ -2.36
CSPG5O95196 AL627230.5-201ENST00000619807 58 ntBASIC0.32□□□□□ -2.36
CSPG5O95196 SNORD36A-201ENST00000362874 73 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 Y_RNA.163-201ENST00000363702 113 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 RNU6-1056P-201ENST00000383996 107 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 Y_RNA.423-201ENST00000384057 113 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 RNU6-30P-201ENST00000384561 107 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 MIR329-2-201ENST00000385029 84 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 RNU6-243P-201ENST00000391140 107 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.31□□□□□ -2.36
CSPG5O95196 AL161932.1-201ENST00000437408 146 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 AC109327.2-201ENST00000448339 378 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 RNU6-406P-201ENST00000516470 107 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 MIR6718-201ENST00000616153 80 ntBASIC0.31□□□□□ -2.36
CSPG5O95196 SNORA19.1-201ENST00000410656 129 ntBASIC0.3□□□□□ -2.36
CSPG5O95196 RNU6-1265P-201ENST00000516342 103 ntBASIC0.3□□□□□ -2.36
CSPG5O95196 RNU6-86P-201ENST00000606534 107 ntBASIC0.3□□□□□ -2.36
CSPG5O95196 MIR6755-201ENST00000619993 66 ntBASIC0.3□□□□□ -2.36
CSPG5O95196 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.29□□□□□ -2.36
CSPG5O95196 MIR181B2-201ENST00000385004 89 ntBASIC0.29□□□□□ -2.36
CSPG5O95196 SNORD41.1-201ENST00000391000 69 ntBASIC0.29□□□□□ -2.36
CSPG5O95196 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
CSPG5O95196 RNU7-13P-201ENST00000516413 62 ntBASIC0.29□□□□□ -2.36
CSPG5O95196 AL162376.1-201ENST00000624117 175 ntBASIC0.29□□□□□ -2.36
CSPG5O95196 RNU6-834P-201ENST00000362367 110 ntBASIC0.28□□□□□ -2.36
CSPG5O95196 RNU6-1244P-201ENST00000363614 108 ntBASIC0.28□□□□□ -2.36
CSPG5O95196 RNU6-269P-201ENST00000391077 97 ntBASIC0.28□□□□□ -2.36
CSPG5O95196 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.28□□□□□ -2.36
CSPG5O95196 AC073261.1-201ENST00000429409 121 ntBASIC0.28□□□□□ -2.36
CSPG5O95196 snoU13.19-201ENST00000459148 104 ntBASIC0.28□□□□□ -2.36
CSPG5O95196 RNU6-863P-201ENST00000515989 104 ntBASIC0.28□□□□□ -2.36
CSPG5O95196 MIR5589-201ENST00000579442 60 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms