Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNA5SP102-201ENST00000516865 106 ntBASIC1.3□□□□□ -2.2
VAMP4O75379 Y_RNA.174-201ENST00000363781 105 ntBASIC1.29□□□□□ -2.2
VAMP4O75379 RNU6-979P-201ENST00000383896 107 ntBASIC1.29□□□□□ -2.2
VAMP4O75379 SNORD89-201ENST00000390981 114 ntBASIC1.29□□□□□ -2.2
VAMP4O75379 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
VAMP4O75379 AC244505.6-201ENST00000452829 130 ntBASIC1.29□□□□□ -2.2
VAMP4O75379 RNA5SP220-201ENST00000516298 104 ntBASIC1.29□□□□□ -2.2
VAMP4O75379 uc_338.16-201ENST00000621804 95 ntBASIC1.29□□□□□ -2.2
VAMP4O75379 RNA5SP245-201ENST00000364239 121 ntBASIC1.28□□□□□ -2.2
VAMP4O75379 Y_RNA.283-201ENST00000364798 112 ntBASIC1.28□□□□□ -2.2
VAMP4O75379 RNU6-42P-201ENST00000384165 107 ntBASIC1.28□□□□□ -2.2
VAMP4O75379 AC022137.1-201ENST00000483735 151 ntBASIC1.28□□□□□ -2.2
VAMP4O75379 MIR4536-1-201ENST00000583537 88 ntBASIC1.28□□□□□ -2.2
VAMP4O75379 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.28□□□□□ -2.2
VAMP4O75379 SNORD114-27-201ENST00000363766 70 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 RNA5SP173-201ENST00000364857 136 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 MIR519C-201ENST00000385053 87 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 MIR520H-201ENST00000385126 88 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 SNORD105-201ENST00000386910 85 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 RNU6-466P-201ENST00000391224 103 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 MIR942-201ENST00000401111 86 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 SNORD124-201ENST00000459577 104 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 OR2A41P-201ENST00000473586 105 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 MIR5588-201ENST00000581890 63 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 AC025627.3-201ENST00000582078 182 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 MIR548BB-201ENST00000626714 66 ntBASIC1.27□□□□□ -2.21
VAMP4O75379 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VAMP4O75379 Y_RNA.191-201ENST00000363972 113 ntBASIC1.26□□□□□ -2.21
VAMP4O75379 MIR599-201ENST00000385069 95 ntBASIC1.26□□□□□ -2.21
VAMP4O75379 MIR1236-201ENST00000408340 102 ntBASIC1.26□□□□□ -2.21
VAMP4O75379 RNU6-592P-201ENST00000411333 103 ntBASIC1.26□□□□□ -2.21
VAMP4O75379 RNU6-75P-201ENST00000515944 104 ntBASIC1.26□□□□□ -2.21
VAMP4O75379 RNU6-65P-201ENST00000516332 98 ntBASIC1.26□□□□□ -2.21
VAMP4O75379 MIR6504-201ENST00000613520 61 ntBASIC1.26□□□□□ -2.21
VAMP4O75379 Y_RNA.73-201ENST00000362910 113 ntBASIC1.25□□□□□ -2.21
VAMP4O75379 SNORD115-27-201ENST00000364430 82 ntBASIC1.25□□□□□ -2.21
VAMP4O75379 RNU6-242P-201ENST00000384359 107 ntBASIC1.25□□□□□ -2.21
VAMP4O75379 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
VAMP4O75379 RNU7-171P-201ENST00000459581 62 ntBASIC1.25□□□□□ -2.21
VAMP4O75379 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VAMP4O75379 MIR373-201ENST00000362273 69 ntBASIC1.24□□□□□ -2.21
VAMP4O75379 RNU6-957P-201ENST00000363652 99 ntBASIC1.24□□□□□ -2.21
VAMP4O75379 RNU1-93P-201ENST00000364704 169 ntBASIC1.24□□□□□ -2.21
VAMP4O75379 Y_RNA.426-201ENST00000384068 113 ntBASIC1.24□□□□□ -2.21
VAMP4O75379 AC002350.1-201ENST00000490759 375 ntBASIC1.24□□□□□ -2.21
VAMP4O75379 SNORA31.14-201ENST00000516728 116 ntBASIC1.24□□□□□ -2.21
VAMP4O75379 MIR7111-201ENST00000619751 72 ntBASIC1.24□□□□□ -2.21
VAMP4O75379 RNU6-1276P-201ENST00000365372 104 ntBASIC1.23□□□□□ -2.21
VAMP4O75379 Y_RNA.355-201ENST00000365462 98 ntBASIC1.23□□□□□ -2.21
VAMP4O75379 RNU6-573P-201ENST00000383938 106 ntBASIC1.23□□□□□ -2.21
VAMP4O75379 Y_RNA.611-201ENST00000410682 108 ntBASIC1.23□□□□□ -2.21
VAMP4O75379 MIR6734-201ENST00000621166 68 ntBASIC1.23□□□□□ -2.21
VAMP4O75379 AC006160.2-201ENST00000637708 154 ntBASIC1.23□□□□□ -2.21
VAMP4O75379 Y_RNA.32-201ENST00000362589 110 ntBASIC1.22□□□□□ -2.21
VAMP4O75379 RNA5SP117-201ENST00000365294 118 ntBASIC1.22□□□□□ -2.21
VAMP4O75379 RNU6-524P-201ENST00000384270 107 ntBASIC1.22□□□□□ -2.21
VAMP4O75379 AC093729.1-201ENST00000513074 128 ntBASIC1.22□□□□□ -2.21
VAMP4O75379 RNA5SP255-201ENST00000516370 107 ntBASIC1.22□□□□□ -2.21
VAMP4O75379 TRDV1-202ENST00000621643 102 ntBASIC1.22□□□□□ -2.21
VAMP4O75379 Y_RNA.219-201ENST00000364232 113 ntBASIC1.21□□□□□ -2.22
VAMP4O75379 Y_RNA.607-201ENST00000410597 98 ntBASIC1.21□□□□□ -2.22
VAMP4O75379 RNU6-135P-201ENST00000516769 101 ntBASIC1.21□□□□□ -2.22
VAMP4O75379 MIR3973-201ENST00000579824 107 ntBASIC1.21□□□□□ -2.22
VAMP4O75379 MTRNR2L2-201ENST00000604882 87 ntBASIC1.21□□□□□ -2.22
VAMP4O75379 RNU4-32P-201ENST00000363404 141 ntBASIC1.2□□□□□ -2.22
VAMP4O75379 RNU6-811P-201ENST00000384069 107 ntBASIC1.2□□□□□ -2.22
VAMP4O75379 MIR532-201ENST00000385025 91 ntBASIC1.2□□□□□ -2.22
VAMP4O75379 AC103810.9-201ENST00000606688 112 ntBASIC1.2□□□□□ -2.22
VAMP4O75379 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
VAMP4O75379 SNORD115-37-201ENST00000363768 82 ntBASIC1.19□□□□□ -2.22
VAMP4O75379 MIR548U-201ENST00000390728 81 ntBASIC1.19□□□□□ -2.22
VAMP4O75379 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
VAMP4O75379 RNU6-1265P-201ENST00000516342 103 ntBASIC1.19□□□□□ -2.22
VAMP4O75379 MIR4666B-201ENST00000578142 81 ntBASIC1.19□□□□□ -2.22
VAMP4O75379 MIR573-201ENST00000384964 99 ntBASIC1.18□□□□□ -2.22
VAMP4O75379 AL606490.4-201ENST00000423117 127 ntBASIC1.18□□□□□ -2.22
VAMP4O75379 MIR3064-201ENST00000581130 66 ntBASIC1.18□□□□□ -2.22
VAMP4O75379 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
VAMP4O75379 MIR3202-2-201ENST00000635980 79 ntBASIC1.18□□□□□ -2.22
VAMP4O75379 SNORD114-22-201ENST00000365423 72 ntBASIC1.17□□□□□ -2.22
VAMP4O75379 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VAMP4O75379 RNU6-132P-201ENST00000383863 107 ntBASIC1.17□□□□□ -2.22
VAMP4O75379 Y_RNA.596-201ENST00000410462 109 ntBASIC1.17□□□□□ -2.22
VAMP4O75379 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.17□□□□□ -2.22
VAMP4O75379 AC140658.3-201ENST00000567603 271 ntBASIC1.17□□□□□ -2.22
VAMP4O75379 AC104996.3-201ENST00000590718 94 ntBASIC1.17□□□□□ -2.22
VAMP4O75379 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
VAMP4O75379 RNU6-664P-201ENST00000362381 107 ntBASIC1.16□□□□□ -2.22
VAMP4O75379 RNA5SP403-201ENST00000363598 108 ntBASIC1.16□□□□□ -2.22
VAMP4O75379 Y_RNA.221-201ENST00000364248 96 ntBASIC1.16□□□□□ -2.22
VAMP4O75379 RNU7-153P-201ENST00000516455 62 ntBASIC1.16□□□□□ -2.22
VAMP4O75379 MIR4696-201ENST00000581431 70 ntBASIC1.16□□□□□ -2.22
VAMP4O75379 MIR4661-201ENST00000582720 75 ntBASIC1.16□□□□□ -2.22
VAMP4O75379 MIR1245B-201ENST00000636115 69 ntBASIC1.16□□□□□ -2.22
VAMP4O75379 RNU6-1335P-201ENST00000365426 107 ntBASIC1.15□□□□□ -2.23
VAMP4O75379 SNORD78.1-201ENST00000390866 65 ntBASIC1.15□□□□□ -2.23
VAMP4O75379 SNORA25.13-201ENST00000516395 103 ntBASIC1.15□□□□□ -2.23
VAMP4O75379 Y_RNA.685-201ENST00000516532 108 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms