Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.05□□□□□ -2.58
SHOX2O60902 MIR4756-201ENST00000577874 78 ntBASIC-1.05□□□□□ -2.58
SHOX2O60902 AL132765.2-201ENST00000610812 351 ntBASIC-1.05□□□□□ -2.58
SHOX2O60902 MIR6874-201ENST00000635894 71 ntBASIC-1.05□□□□□ -2.58
SHOX2O60902 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.06□□□□□ -2.58
SHOX2O60902 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.06□□□□□ -2.58
SHOX2O60902 SNORA40.15-201ENST00000516884 107 ntBASIC-1.06□□□□□ -2.58
SHOX2O60902 AP001362.1-201ENST00000625165 124 ntBASIC-1.06□□□□□ -2.58
SHOX2O60902 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.07□□□□□ -2.58
SHOX2O60902 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.07□□□□□ -2.58
SHOX2O60902 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.07□□□□□ -2.58
SHOX2O60902 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.07□□□□□ -2.58
SHOX2O60902 MIR1252-201ENST00000408861 65 ntBASIC-1.07□□□□□ -2.58
SHOX2O60902 AC022028.1-201ENST00000412054 408 ntBASIC-1.07□□□□□ -2.58
SHOX2O60902 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.07□□□□□ -2.58
SHOX2O60902 AC093783.1-201ENST00000612976 329 ntBASIC-1.07□□□□□ -2.58
SHOX2O60902 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.07□□□□□ -2.58
SHOX2O60902 RNU6-704P-201ENST00000364162 103 ntBASIC-1.08□□□□□ -2.58
SHOX2O60902 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.08□□□□□ -2.58
SHOX2O60902 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.08□□□□□ -2.58
SHOX2O60902 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.08□□□□□ -2.58
SHOX2O60902 RNU6-571P-201ENST00000384128 107 ntBASIC-1.08□□□□□ -2.58
SHOX2O60902 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.08□□□□□ -2.58
SHOX2O60902 RNU6-576P-201ENST00000390854 102 ntBASIC-1.08□□□□□ -2.58
SHOX2O60902 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.09□□□□□ -2.58
SHOX2O60902 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.09□□□□□ -2.58
SHOX2O60902 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.09□□□□□ -2.58
SHOX2O60902 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.09□□□□□ -2.58
SHOX2O60902 RNA5SP26-201ENST00000362406 119 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 RNU6-103P-201ENST00000363686 107 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 RNU6-101P-201ENST00000410323 104 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 AC108019.1-201ENST00000512540 175 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 AL353803.5-201ENST00000599815 141 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 U6atac.1-201ENST00000616025 117 ntBASIC-1.1□□□□□ -2.59
SHOX2O60902 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 SNORD115-19-201ENST00000363098 82 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 SNORD115-18-201ENST00000363293 82 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 RNU6-164P-201ENST00000364604 103 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 SNORD115-17-201ENST00000364612 82 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 RNU6-472P-201ENST00000384299 107 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 MIR516A2-201ENST00000384888 90 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 MIR516A1-201ENST00000385033 90 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 RNU6-823P-201ENST00000391042 103 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 RNU6-381P-201ENST00000391259 108 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 RNU4-69P-201ENST00000410677 143 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.11□□□□□ -2.59
SHOX2O60902 SNORD18.2-201ENST00000459604 70 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 RNU6-850P-201ENST00000516934 103 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 MIR4464-201ENST00000580818 92 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 RNU2-4P-201ENST00000606190 192 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 MIR376B-201ENST00000614515 100 ntBASIC-1.11□□□□□ -2.59
SHOX2O60902 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 SNORD115-33-201ENST00000363723 82 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 SNORA62.4-201ENST00000365504 151 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 SNORD2.1-201ENST00000458762 69 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 FGF7P4-201ENST00000509595 295 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 RNU7-2P-201ENST00000516096 62 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 RNA5SP236-201ENST00000516169 116 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 AC009779.6-201ENST00000603972 165 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 AC087741.2-201ENST00000619415 172 ntBASIC-1.12□□□□□ -2.59
SHOX2O60902 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.13□□□□□ -2.59
SHOX2O60902 RNU6-770P-201ENST00000363929 105 ntBASIC-1.13□□□□□ -2.59
SHOX2O60902 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.13□□□□□ -2.59
SHOX2O60902 SNORD115-27-201ENST00000364430 82 ntBASIC-1.13□□□□□ -2.59
SHOX2O60902 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.13□□□□□ -2.59
SHOX2O60902 RNU6-337P-201ENST00000391243 106 ntBASIC-1.13□□□□□ -2.59
SHOX2O60902 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.13□□□□□ -2.59
SHOX2O60902 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.13□□□□□ -2.59
SHOX2O60902 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 RNU6-690P-201ENST00000365242 106 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 RNU4-17P-201ENST00000365598 141 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 MIRLET7B-201ENST00000385140 83 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 MIR548E-201ENST00000408287 88 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 AC138393.2-201ENST00000414742 246 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 AC068339.1-201ENST00000526965 141 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 AC090971.5-201ENST00000621102 293 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 U6.100-201ENST00000636230 99 ntBASIC-1.14□□□□□ -2.59
SHOX2O60902 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.15□□□□□ -2.59
SHOX2O60902 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.15□□□□□ -2.59
SHOX2O60902 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.15□□□□□ -2.59
SHOX2O60902 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.15□□□□□ -2.59
SHOX2O60902 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.15□□□□□ -2.59
SHOX2O60902 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.15□□□□□ -2.59
SHOX2O60902 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.15□□□□□ -2.59
SHOX2O60902 MIR582-201ENST00000365731 98 ntBASIC-1.15□□□□□ -2.59
SHOX2O60902 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms