Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC048334.1-201ENST00000477975 159 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 AC023827.1-201ENST00000569247 97 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 MIR1273D-201ENST00000577266 86 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 MIR4299-201ENST00000577899 72 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ACTN4O43707 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ACTN4O43707 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
ACTN4O43707 MIR216B-201ENST00000390186 82 ntBASIC2.24□□□□□ -2.05
ACTN4O43707 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ACTN4O43707 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.24□□□□□ -2.05
ACTN4O43707 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.24□□□□□ -2.05
ACTN4O43707 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ACTN4O43707 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ACTN4O43707 RNU6-1039P-201ENST00000383931 107 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 MIR30A-201ENST00000385092 71 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 RN7SKP223-201ENST00000410582 62 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 RNU7-24P-201ENST00000458867 62 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 SNORA44.1-201ENST00000517031 108 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 AL512310.8-201ENST00000550183 120 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 MIR6509-201ENST00000614603 85 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
ACTN4O43707 NAMPTP3-201ENST00000569273 224 ntBASIC2.22□□□□□ -2.05
ACTN4O43707 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
ACTN4O43707 RNU6-495P-201ENST00000362995 107 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
ACTN4O43707 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 RNU6-977P-201ENST00000516411 103 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 MIR6715A-201ENST00000615929 79 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 MIR219B-201ENST00000637023 88 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
ACTN4O43707 SNORD115-24-201ENST00000363528 82 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 RNU6-1126P-201ENST00000384002 107 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 MIR203A-201ENST00000384836 110 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 RNU1-119P-201ENST00000391122 165 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 RNU6-994P-201ENST00000410507 111 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 SNORA31.2-201ENST00000516019 134 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 RNU6-542P-201ENST00000516405 103 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 MIR4804-201ENST00000581683 73 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ACTN4O43707 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ACTN4O43707 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 MIR548AG2-201ENST00000581228 64 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 MIR3920-201ENST00000581751 86 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 AC073869.9-201ENST00000641610 120 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ACTN4O43707 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
ACTN4O43707 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 AL591704.2-201ENST00000421658 181 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ACTN4O43707 SNORA31.14-201ENST00000516728 116 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 RN7SKP88-201ENST00000516847 250 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTN4O43707 7SK.8-201ENST00000612110 250 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 7SK.11-201ENST00000615477 250 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 uc_338.20-201ENST00000621563 178 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 7SK.13-201ENST00000622040 250 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 Y_RNA.32-201ENST00000362589 110 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 RNA5SP403-201ENST00000363598 108 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 Y_RNA.375-201ENST00000365625 101 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 RNU7-56P-201ENST00000458744 62 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 MIR3124-201ENST00000582636 67 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 AL157834.3-201ENST00000615543 103 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 AC092634.7-201ENST00000621022 103 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 ZNF355P-201ENST00000427301 3216 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 Y_RNA.174-201ENST00000363781 105 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 MIR617-201ENST00000385030 97 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 MIR100-201ENST00000385259 80 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 MIR1261-201ENST00000408659 82 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 RNA5SP233-201ENST00000459153 113 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
ACTN4O43707 MIR934-201ENST00000401241 83 ntBASIC2.15□□□□□ -2.07
ACTN4O43707 RNU7-104P-201ENST00000459398 79 ntBASIC2.15□□□□□ -2.07
ACTN4O43707 uc_338.16-201ENST00000621804 95 ntBASIC2.15□□□□□ -2.07
ACTN4O43707 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.15□□□□□ -2.07
ACTN4O43707 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.15□□□□□ -2.07
ACTN4O43707 RNU6-369P-201ENST00000362515 102 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 Y_RNA.363-201ENST00000365529 113 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTN4O43707 RNU7-21P-201ENST00000459430 62 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 RNU7-161P-201ENST00000517289 62 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 MIR548O2-201ENST00000616090 70 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 RNU6-829P-201ENST00000363700 112 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 SNORA25.5-201ENST00000363782 126 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 RNU6-645P-201ENST00000364649 106 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 MIR504-201ENST00000385065 83 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 AC067940.1-201ENST00000458411 300 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 AL359821.1-201ENST00000605519 182 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 MIR1-1-201ENST00000362147 71 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 RNU6-1079P-201ENST00000362861 110 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 RNU6-54P-201ENST00000365563 107 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 SNORA80D-201ENST00000384488 135 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ACTN4O43707 snoU13.26-201ENST00000459452 105 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 MIR4648-201ENST00000580107 72 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 MIR466-201ENST00000580653 84 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms