Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MIR548D2-201ENST00000384955 97 ntBASIC-0.11□□□□□ -2.43
MSH4O15457 RNU7-159P-201ENST00000459284 62 ntBASIC-0.11□□□□□ -2.43
MSH4O15457 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.11□□□□□ -2.43
MSH4O15457 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.11□□□□□ -2.43
MSH4O15457 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.12□□□□□ -2.43
MSH4O15457 RNU6-363P-201ENST00000362895 105 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 RNU1-141P-201ENST00000364623 158 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 SNORD38.2-201ENST00000384470 69 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 AL353813.1-201ENST00000440700 253 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 AC093423.1-201ENST00000440817 142 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.12□□□□□ -2.43
MSH4O15457 RNU7-74P-201ENST00000459104 62 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 MIR4473-201ENST00000583731 91 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 U7.2-201ENST00000607576 63 ntBASIC-0.12□□□□□ -2.43
MSH4O15457 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.12□□□□□ -2.43
MSH4O15457 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 MIR617-201ENST00000385030 97 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 MIR519E-201ENST00000385075 84 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 MIR516B1-201ENST00000385211 90 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 MIR876-201ENST00000401147 81 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 SNORA25.13-201ENST00000516395 103 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 AC084368.1-201ENST00000620935 65 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 MIR6514-201ENST00000622549 70 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.13□□□□□ -2.43
MSH4O15457 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 SNORD36A-201ENST00000362874 73 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 SNORD115-44-201ENST00000365391 82 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 RNU6-409P-201ENST00000384114 104 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 SNORA75.1-201ENST00000391130 148 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 RNU6-243P-201ENST00000391140 107 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 MIR548G-201ENST00000408442 89 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 RNU6-90P-201ENST00000606352 106 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 AC025166.1-201ENST00000612411 163 ntBASIC-0.14□□□□□ -2.43
MSH4O15457 MTND5P18-201ENST00000445624 1801 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 SNORD58C-201ENST00000365223 64 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 MTND4LP9-201ENST00000427694 174 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 AC104692.1-201ENST00000472406 90 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 RNU6-287P-201ENST00000516230 98 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 RNU6-346P-201ENST00000516288 111 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 CR383656.4-201ENST00000546909 122 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 AL670379.3-201ENST00000605040 251 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 TRDV1-202ENST00000621643 102 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 MIR6759-201ENST00000638110 65 ntBASIC-0.15□□□□□ -2.43
MSH4O15457 RNU6-957P-201ENST00000363652 99 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 SNORD38.1-201ENST00000363863 68 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 SNORA51.5-201ENST00000384126 131 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 RNU6-816P-201ENST00000390914 107 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 MIR2113-201ENST00000459007 91 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 YWHAEP2-201ENST00000580066 112 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 AC069503.3-201ENST00000618674 145 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 U6.100-201ENST00000636230 99 ntBASIC-0.16□□□□□ -2.44
MSH4O15457 RNY4P6-201ENST00000363667 96 ntBASIC-0.17□□□□□ -2.44
MSH4O15457 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.17□□□□□ -2.44
MSH4O15457 AC109327.2-201ENST00000448339 378 ntBASIC-0.17□□□□□ -2.44
MSH4O15457 RNU7-200P-201ENST00000516105 62 ntBASIC-0.17□□□□□ -2.44
MSH4O15457 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.17□□□□□ -2.44
MSH4O15457 RN7SL660P-201ENST00000614852 299 ntBASIC-0.17□□□□□ -2.44
MSH4O15457 MIR148A-201ENST00000362215 68 ntBASIC-0.18□□□□□ -2.44
MSH4O15457 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
MSH4O15457 RNU6-46P-201ENST00000383860 107 ntBASIC-0.18□□□□□ -2.44
MSH4O15457 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.18□□□□□ -2.44
MSH4O15457 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.18□□□□□ -2.44
MSH4O15457 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.18□□□□□ -2.44
MSH4O15457 MIR4460-201ENST00000577862 86 ntBASIC-0.18□□□□□ -2.44
MSH4O15457 AL442128.1-201ENST00000615151 90 ntBASIC-0.18□□□□□ -2.44
MSH4O15457 SNORA18.1-201ENST00000363418 128 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 MIR181B2-201ENST00000385004 89 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 RNU6-257P-201ENST00000410238 98 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 RNU7-107P-201ENST00000459121 61 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 RNU6-772P-201ENST00000516042 105 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 RNU6-255P-201ENST00000516957 105 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 RNU7-188P-201ENST00000517063 64 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 IGLVI-20-201ENST00000519296 130 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 MIR548AE1-201ENST00000583292 70 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 AL162726.3-218ENST00000636401 95 ntBASIC-0.19□□□□□ -2.44
MSH4O15457 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.2□□□□□ -2.44
MSH4O15457 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms