Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SNORA9.1-201ENST00000362412 131 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 Y_RNA.247-201ENST00000364500 92 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 Y_RNA.377-201ENST00000365644 108 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 RNU6-524P-201ENST00000384270 107 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 MIR516A2-201ENST00000384888 90 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 MIR516A1-201ENST00000385033 90 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
ATP2A1O14983 Y_RNA.323-201ENST00000365157 109 ntBASIC0.2□□□□□ -2.38
ATP2A1O14983 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.2□□□□□ -2.38
ATP2A1O14983 RNU6-1265P-201ENST00000516342 103 ntBASIC0.2□□□□□ -2.38
ATP2A1O14983 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
ATP2A1O14983 Y_RNA.30-201ENST00000362572 97 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 RNA5SP257-201ENST00000363023 116 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 Y_RNA.173-201ENST00000363776 113 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 SNORA2A-201ENST00000383885 135 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 MIR548A3-201ENST00000385297 97 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 RNU6-1254P-201ENST00000391266 104 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 RNU7-13P-201ENST00000516413 62 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 MIR4694-201ENST00000578534 80 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 MIR4752-201ENST00000579672 72 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 AL670379.3-201ENST00000605040 251 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 RNU1-29P-201ENST00000606574 126 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 AC073869.9-201ENST00000641610 120 ntBASIC0.19□□□□□ -2.38
ATP2A1O14983 Y_RNA.57-201ENST00000362806 113 ntBASIC0.18□□□□□ -2.38
ATP2A1O14983 MIR760-201ENST00000390220 80 ntBASIC0.18□□□□□ -2.38
ATP2A1O14983 TMSB4XP3-201ENST00000445144 114 ntBASIC0.18□□□□□ -2.38
ATP2A1O14983 AC096720.1-201ENST00000604441 183 ntBASIC0.18□□□□□ -2.38
ATP2A1O14983 Y_RNA.353-201ENST00000365440 108 ntBASIC0.17□□□□□ -2.38
ATP2A1O14983 Y_RNA.549-201ENST00000384657 102 ntBASIC0.17□□□□□ -2.38
ATP2A1O14983 RNU6-959P-201ENST00000384671 107 ntBASIC0.17□□□□□ -2.38
ATP2A1O14983 MIR548A1-201ENST00000385041 97 ntBASIC0.17□□□□□ -2.38
ATP2A1O14983 MIR577-201ENST00000385196 96 ntBASIC0.17□□□□□ -2.38
ATP2A1O14983 RNU6-1333P-201ENST00000516162 93 ntBASIC0.17□□□□□ -2.38
ATP2A1O14983 MIR5706-201ENST00000579841 80 ntBASIC0.17□□□□□ -2.38
ATP2A1O14983 MIR3920-201ENST00000581751 86 ntBASIC0.17□□□□□ -2.38
ATP2A1O14983 RNA5SP128-201ENST00000365305 116 ntBASIC0.16□□□□□ -2.38
ATP2A1O14983 RNU6-81P-201ENST00000365608 104 ntBASIC0.16□□□□□ -2.38
ATP2A1O14983 Y_RNA.563-201ENST00000384707 108 ntBASIC0.16□□□□□ -2.38
ATP2A1O14983 RNU6-269P-201ENST00000391077 97 ntBASIC0.16□□□□□ -2.38
ATP2A1O14983 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.16□□□□□ -2.38
ATP2A1O14983 RNU7-74P-201ENST00000459104 62 ntBASIC0.16□□□□□ -2.38
ATP2A1O14983 AC068339.1-201ENST00000526965 141 ntBASIC0.16□□□□□ -2.38
ATP2A1O14983 SNORD36A-201ENST00000362874 73 ntBASIC0.15□□□□□ -2.39
ATP2A1O14983 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
ATP2A1O14983 SNORD115-44-201ENST00000365391 82 ntBASIC0.15□□□□□ -2.39
ATP2A1O14983 RNU6-243P-201ENST00000391140 107 ntBASIC0.15□□□□□ -2.39
ATP2A1O14983 RNY3P2-201ENST00000362918 102 ntBASIC0.14□□□□□ -2.39
ATP2A1O14983 RNU6-832P-201ENST00000363319 107 ntBASIC0.14□□□□□ -2.39
ATP2A1O14983 RNU6-509P-201ENST00000363519 107 ntBASIC0.14□□□□□ -2.39
ATP2A1O14983 Y_RNA.374-201ENST00000365606 101 ntBASIC0.14□□□□□ -2.39
ATP2A1O14983 AC008267.6-201ENST00000441664 139 ntBASIC0.14□□□□□ -2.39
ATP2A1O14983 RNU7-129P-201ENST00000516128 62 ntBASIC0.14□□□□□ -2.39
ATP2A1O14983 U7.6-201ENST00000610841 64 ntBASIC0.14□□□□□ -2.39
ATP2A1O14983 U8.6-201ENST00000364939 135 ntBASIC0.13□□□□□ -2.39
ATP2A1O14983 MIR5009-201ENST00000578736 100 ntBASIC0.13□□□□□ -2.39
ATP2A1O14983 SNORA70.25-201ENST00000612741 95 ntBASIC0.13□□□□□ -2.39
ATP2A1O14983 Y_RNA.281-201ENST00000364774 94 ntBASIC0.12□□□□□ -2.39
ATP2A1O14983 RNU6-880P-201ENST00000384526 107 ntBASIC0.12□□□□□ -2.39
ATP2A1O14983 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
ATP2A1O14983 uc_338.28-201ENST00000612082 187 ntBASIC0.12□□□□□ -2.39
ATP2A1O14983 RNU6-1125P-201ENST00000363601 107 ntBASIC0.11□□□□□ -2.39
ATP2A1O14983 RNU6-1163P-201ENST00000364516 107 ntBASIC0.11□□□□□ -2.39
ATP2A1O14983 RNU6-480P-201ENST00000384332 107 ntBASIC0.11□□□□□ -2.39
ATP2A1O14983 RNU6-127P-201ENST00000390897 107 ntBASIC0.11□□□□□ -2.39
ATP2A1O14983 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
ATP2A1O14983 Y_RNA.681-201ENST00000516445 113 ntBASIC0.11□□□□□ -2.39
ATP2A1O14983 TRDV1-202ENST00000621643 102 ntBASIC0.11□□□□□ -2.39
ATP2A1O14983 RNU6-1232P-201ENST00000516299 86 ntBASIC0.1□□□□□ -2.39
ATP2A1O14983 RNU6-412P-201ENST00000516434 106 ntBASIC0.1□□□□□ -2.39
ATP2A1O14983 MIR5190-201ENST00000581537 80 ntBASIC0.1□□□□□ -2.39
ATP2A1O14983 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 Y_RNA.163-201ENST00000363702 113 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 SNORD116-21-201ENST00000384507 92 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 MIR617-201ENST00000385030 97 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 MIR501-201ENST00000390204 84 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 AC006210.1-201ENST00000424882 111 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 RNA5SP484-201ENST00000458857 111 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 Y_RNA.659-201ENST00000515994 113 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 AC141557.1-201ENST00000540982 400 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 MIR499B-201ENST00000636498 73 ntBASIC0.09□□□□□ -2.4
ATP2A1O14983 Y_RNA.78-201ENST00000362970 110 ntBASIC0.08□□□□□ -2.4
ATP2A1O14983 RNU6-1244P-201ENST00000363614 108 ntBASIC0.08□□□□□ -2.4
ATP2A1O14983 Y_RNA.261-201ENST00000364631 102 ntBASIC0.08□□□□□ -2.4
ATP2A1O14983 SNORD110-201ENST00000408189 75 ntBASIC0.08□□□□□ -2.4
ATP2A1O14983 NAMPTP3-201ENST00000569273 224 ntBASIC0.08□□□□□ -2.4
ATP2A1O14983 MIR548AG2-201ENST00000581228 64 ntBASIC0.08□□□□□ -2.4
ATP2A1O14983 MIR4439-201ENST00000583746 80 ntBASIC0.08□□□□□ -2.4
ATP2A1O14983 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
ATP2A1O14983 SNORD45B-201ENST00000364617 72 ntBASIC0.07□□□□□ -2.4
ATP2A1O14983 RNU6-652P-201ENST00000365488 107 ntBASIC0.07□□□□□ -2.4
ATP2A1O14983 MIR610-201ENST00000385139 96 ntBASIC0.07□□□□□ -2.4
ATP2A1O14983 RNU6-466P-201ENST00000391224 103 ntBASIC0.07□□□□□ -2.4
ATP2A1O14983 Y_RNA.596-201ENST00000410462 109 ntBASIC0.07□□□□□ -2.4
ATP2A1O14983 RNU6-782P-201ENST00000516852 104 ntBASIC0.07□□□□□ -2.4
ATP2A1O14983 MIR548AD-201ENST00000584780 82 ntBASIC0.07□□□□□ -2.4
ATP2A1O14983 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms