Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNORA25.16-201ENST00000516741 121 ntBASIC1.26□□□□□ -2.21
TRIM38O00635 MIR4491-201ENST00000581087 68 ntBASIC1.26□□□□□ -2.21
TRIM38O00635 MIR3064-201ENST00000581130 66 ntBASIC1.26□□□□□ -2.21
TRIM38O00635 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRIM38O00635 RNU6-686P-201ENST00000364839 107 ntBASIC1.25□□□□□ -2.21
TRIM38O00635 MIR520H-201ENST00000385126 88 ntBASIC1.25□□□□□ -2.21
TRIM38O00635 RNU6-1254P-201ENST00000391266 104 ntBASIC1.25□□□□□ -2.21
TRIM38O00635 MIR4536-1-201ENST00000583537 88 ntBASIC1.25□□□□□ -2.21
TRIM38O00635 AC104996.3-201ENST00000590718 94 ntBASIC1.25□□□□□ -2.21
TRIM38O00635 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRIM38O00635 MIRLET7F1-201ENST00000362202 87 ntBASIC1.24□□□□□ -2.21
TRIM38O00635 RNU6-957P-201ENST00000363652 99 ntBASIC1.24□□□□□ -2.21
TRIM38O00635 Y_RNA.330-201ENST00000365230 109 ntBASIC1.24□□□□□ -2.21
TRIM38O00635 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
TRIM38O00635 MIR635-201ENST00000384830 98 ntBASIC1.24□□□□□ -2.21
TRIM38O00635 MT-TF-201ENST00000387314 71 ntBASIC1.24□□□□□ -2.21
TRIM38O00635 AC002429.1-201ENST00000437672 148 ntBASIC1.24□□□□□ -2.21
TRIM38O00635 AC114801.3-201ENST00000510231 177 ntBASIC1.24□□□□□ -2.21
TRIM38O00635 SNORD114-27-201ENST00000363766 70 ntBASIC1.23□□□□□ -2.21
TRIM38O00635 MIR200A-201ENST00000384875 90 ntBASIC1.23□□□□□ -2.21
TRIM38O00635 RNU6-243P-201ENST00000391140 107 ntBASIC1.23□□□□□ -2.21
TRIM38O00635 SNORD63B-201ENST00000411005 70 ntBASIC1.23□□□□□ -2.21
TRIM38O00635 snoU13.21-201ENST00000459368 105 ntBASIC1.23□□□□□ -2.21
TRIM38O00635 FGF7P7-201ENST00000514120 227 ntBASIC1.23□□□□□ -2.21
TRIM38O00635 MIR4484-201ENST00000582855 83 ntBASIC1.23□□□□□ -2.21
TRIM38O00635 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRIM38O00635 MIR377-201ENST00000362145 69 ntBASIC1.22□□□□□ -2.21
TRIM38O00635 RNU1-36P-201ENST00000365130 165 ntBASIC1.22□□□□□ -2.21
TRIM38O00635 Y_RNA.491-201ENST00000384417 107 ntBASIC1.22□□□□□ -2.21
TRIM38O00635 AL606490.4-201ENST00000423117 127 ntBASIC1.22□□□□□ -2.21
TRIM38O00635 TRAJ51-201ENST00000504127 63 ntBASIC1.22□□□□□ -2.21
TRIM38O00635 RNU6-1015P-201ENST00000517121 99 ntBASIC1.22□□□□□ -2.21
TRIM38O00635 RMST_2.1-201ENST00000617263 136 ntBASIC1.22□□□□□ -2.21
TRIM38O00635 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRIM38O00635 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 RNU6-580P-201ENST00000365159 107 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 RNU6-42P-201ENST00000384165 107 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 SNORD100-201ENST00000408573 76 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 RNU6-1194P-201ENST00000516208 104 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 SNORD92-201ENST00000585078 85 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 AL078603.1-201ENST00000603824 313 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 MIR664A-201ENST00000626086 82 ntBASIC1.21□□□□□ -2.22
TRIM38O00635 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM38O00635 RNU4-58P-201ENST00000363192 141 ntBASIC1.2□□□□□ -2.22
TRIM38O00635 SNORD77.2-201ENST00000391045 68 ntBASIC1.2□□□□□ -2.22
TRIM38O00635 RNU6-466P-201ENST00000391224 103 ntBASIC1.2□□□□□ -2.22
TRIM38O00635 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM38O00635 SNORD93-201ENST00000408813 74 ntBASIC1.2□□□□□ -2.22
TRIM38O00635 RNU7-195P-201ENST00000458793 62 ntBASIC1.2□□□□□ -2.22
TRIM38O00635 Y_RNA.660-201ENST00000516002 120 ntBASIC1.2□□□□□ -2.22
TRIM38O00635 AC013244.2-201ENST00000603396 103 ntBASIC1.2□□□□□ -2.22
TRIM38O00635 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
TRIM38O00635 RNU6-403P-201ENST00000363163 104 ntBASIC1.19□□□□□ -2.22
TRIM38O00635 RNU6-411P-201ENST00000384451 107 ntBASIC1.19□□□□□ -2.22
TRIM38O00635 AC015818.7-201ENST00000428754 109 ntBASIC1.19□□□□□ -2.22
TRIM38O00635 snoU13.17-201ENST00000458802 104 ntBASIC1.19□□□□□ -2.22
TRIM38O00635 RNA5SP220-201ENST00000516298 104 ntBASIC1.19□□□□□ -2.22
TRIM38O00635 AC023827.1-201ENST00000569247 97 ntBASIC1.19□□□□□ -2.22
TRIM38O00635 RNU6-208P-201ENST00000362431 107 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 Y_RNA.536-201ENST00000384621 113 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 MIR520E-201ENST00000384867 87 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 MIR548U-201ENST00000390728 81 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 AC074348.1-201ENST00000426503 132 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 MIR18B-201ENST00000454574 71 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 RNU6-687P-201ENST00000516443 89 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 RNU6-448P-201ENST00000517052 107 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 MIR6734-201ENST00000621166 68 ntBASIC1.18□□□□□ -2.22
TRIM38O00635 Y_RNA.13-201ENST00000362403 112 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 RNU6-590P-201ENST00000365039 107 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRIM38O00635 SNORD111-201ENST00000408139 94 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 SNORD83.1-201ENST00000411362 77 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 RNU7-185P-201ENST00000459215 60 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 RNU6-70P-201ENST00000516438 60 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 RNU6-539P-201ENST00000516665 103 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
TRIM38O00635 AC106800.4-201ENST00000614905 153 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 TRDV1-202ENST00000621643 102 ntBASIC1.17□□□□□ -2.22
TRIM38O00635 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.17□□□□□ -2.22
TRIM38O00635 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
TRIM38O00635 MIR519A1-201ENST00000385257 85 ntBASIC1.16□□□□□ -2.22
TRIM38O00635 RNU6-380P-201ENST00000410207 107 ntBASIC1.16□□□□□ -2.22
TRIM38O00635 AC092628.1-201ENST00000436250 252 ntBASIC1.16□□□□□ -2.22
TRIM38O00635 MIR6082-201ENST00000613604 109 ntBASIC1.16□□□□□ -2.22
TRIM38O00635 U6.100-201ENST00000636230 99 ntBASIC1.16□□□□□ -2.22
TRIM38O00635 MIR6767-201ENST00000637302 66 ntBASIC1.16□□□□□ -2.22
TRIM38O00635 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
TRIM38O00635 Y_RNA.12-201ENST00000362393 112 ntBASIC1.15□□□□□ -2.23
TRIM38O00635 RNU6-330P-201ENST00000363015 107 ntBASIC1.15□□□□□ -2.23
TRIM38O00635 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
TRIM38O00635 FABP5P4-201ENST00000437203 171 ntBASIC1.15□□□□□ -2.23
TRIM38O00635 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
TRIM38O00635 Y_RNA.809-201ENST00000516058 95 ntBASIC1.15□□□□□ -2.23
TRIM38O00635 RNU6-303P-201ENST00000517091 106 ntBASIC1.15□□□□□ -2.23
TRIM38O00635 AC036111.3-201ENST00000526389 112 ntBASIC1.15□□□□□ -2.23
TRIM38O00635 MIR101-2-201ENST00000362195 79 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 RNU6-1260P-201ENST00000362944 107 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms