Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.02□□□□□ -2.57
UPK1AO00322 SNORD37.2-201ENST00000391075 66 ntBASIC-1.02□□□□□ -2.57
UPK1AO00322 RNU2-38P-201ENST00000410856 79 ntBASIC-1.02□□□□□ -2.57
UPK1AO00322 MTND2P23-201ENST00000422990 651 ntBASIC-1.02□□□□□ -2.57
UPK1AO00322 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.02□□□□□ -2.57
UPK1AO00322 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.02□□□□□ -2.57
UPK1AO00322 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.02□□□□□ -2.57
UPK1AO00322 MIR6738-201ENST00000619620 64 ntBASIC-1.02□□□□□ -2.57
UPK1AO00322 SNORD115-19-201ENST00000363098 82 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 SNORD115-18-201ENST00000363293 82 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 RNU6-957P-201ENST00000363652 99 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 RNU4-36P-201ENST00000364294 144 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 SNORD115-17-201ENST00000364612 82 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 MIR1265-201ENST00000408444 86 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 RNU7-55P-201ENST00000459426 62 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 MIR378F-201ENST00000578143 78 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 MIR3163-201ENST00000581592 73 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 RNU6-86P-201ENST00000606534 107 ntBASIC-1.03□□□□□ -2.57
UPK1AO00322 SNORD114-15-201ENST00000364687 72 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 SNORD101-201ENST00000384027 73 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 MIR759-201ENST00000390224 91 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 RNU6-466P-201ENST00000391224 103 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 RNA5SP25-201ENST00000410815 110 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 RNU6-274P-201ENST00000459566 107 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 AC021753.1-201ENST00000635724 168 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 AL512310.12-203ENST00000640543 90 ntBASIC-1.04□□□□□ -2.58
UPK1AO00322 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.05□□□□□ -2.58
UPK1AO00322 RNU6-312P-201ENST00000364629 107 ntBASIC-1.05□□□□□ -2.58
UPK1AO00322 MIR518B-201ENST00000385127 83 ntBASIC-1.05□□□□□ -2.58
UPK1AO00322 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.05□□□□□ -2.58
UPK1AO00322 RNU6-90P-201ENST00000606352 106 ntBASIC-1.05□□□□□ -2.58
UPK1AO00322 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 SNORD127-201ENST00000458892 86 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 MIR3179-1-201ENST00000578940 84 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 MIR3179-2-201ENST00000579107 84 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 MIR3179-3-201ENST00000579566 84 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 AC108081.1-201ENST00000604358 221 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 MIR548O2-201ENST00000616090 70 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 MIR3179-4-201ENST00000617599 84 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 MTND5P18-201ENST00000445624 1801 ntBASIC-1.06□□□□□ -2.58
UPK1AO00322 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 RNU6-973P-201ENST00000364690 107 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 SNORA49-201ENST00000386157 136 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 MIR548G-201ENST00000408442 89 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 RNU6-721P-201ENST00000410155 105 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 SNORA7.5-201ENST00000410672 110 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 AC044792.1-201ENST00000593294 196 ntBASIC-1.07□□□□□ -2.58
UPK1AO00322 RNU6-664P-201ENST00000362381 107 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 SNORD114-4-201ENST00000363962 75 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 RNU6-10P-201ENST00000384036 107 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 RNU6-918P-201ENST00000391219 106 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 snoU13.11-201ENST00000459219 104 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.08□□□□□ -2.58
UPK1AO00322 RN7SKP19-201ENST00000516016 252 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 RNU6-762P-201ENST00000517107 102 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 MIR548AX-201ENST00000580117 73 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 MIR4696-201ENST00000581431 70 ntBASIC-1.08□□□□□ -2.58
UPK1AO00322 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 SNORD38.1-201ENST00000363863 68 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 RNU6-35P-201ENST00000384530 107 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 RNU6-935P-201ENST00000410371 100 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 AC145423.2-201ENST00000610631 239 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 MIR1255B1-201ENST00000636325 63 ntBASIC-1.09□□□□□ -2.58
UPK1AO00322 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.1□□□□□ -2.59
UPK1AO00322 RNU6-239P-201ENST00000390990 99 ntBASIC-1.1□□□□□ -2.59
UPK1AO00322 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.1□□□□□ -2.59
UPK1AO00322 RNU6-24P-201ENST00000384440 107 ntBASIC-1.11□□□□□ -2.59
UPK1AO00322 RNU4-71P-201ENST00000516258 113 ntBASIC-1.11□□□□□ -2.59
UPK1AO00322 SNORD22.1-201ENST00000516331 125 ntBASIC-1.11□□□□□ -2.59
UPK1AO00322 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.12□□□□□ -2.59
UPK1AO00322 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.12□□□□□ -2.59
UPK1AO00322 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.12□□□□□ -2.59
UPK1AO00322 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.12□□□□□ -2.59
UPK1AO00322 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.12□□□□□ -2.59
UPK1AO00322 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.12□□□□□ -2.59
UPK1AO00322 snoR1.1-201ENST00000628177 80 ntBASIC-1.12□□□□□ -2.59
UPK1AO00322 MIR3658-201ENST00000636291 56 ntBASIC-1.12□□□□□ -2.59
UPK1AO00322 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.13□□□□□ -2.59
UPK1AO00322 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.13□□□□□ -2.59
UPK1AO00322 MT-TI-201ENST00000387365 69 ntBASIC-1.13□□□□□ -2.59
UPK1AO00322 MTCYBP6-201ENST00000441810 138 ntBASIC-1.13□□□□□ -2.59
UPK1AO00322 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.13□□□□□ -2.59
UPK1AO00322 AC140658.3-201ENST00000567603 271 ntBASIC-1.13□□□□□ -2.59
UPK1AO00322 MIR6854-201ENST00000614935 69 ntBASIC-1.13□□□□□ -2.59
UPK1AO00322 RNY1P11-201ENST00000363759 113 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 RNU6-54P-201ENST00000365563 107 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms