Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MIR4802-201ENST00000581881 80 ntBASIC-0.96□□□□□ -2.56
SMKR1H3BMG3 MIR4436A-201ENST00000585278 85 ntBASIC-0.96□□□□□ -2.56
SMKR1H3BMG3 AC096720.1-201ENST00000604441 183 ntBASIC-0.96□□□□□ -2.56
SMKR1H3BMG3 MIR548O2-201ENST00000616090 70 ntBASIC-0.96□□□□□ -2.56
SMKR1H3BMG3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 SNORD38.1-201ENST00000363863 68 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 SNORD101-201ENST00000384027 73 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 SNORD2-201ENST00000459163 69 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 RNU6-111P-201ENST00000517179 105 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 MIR3121-201ENST00000579680 77 ntBASIC-0.97□□□□□ -2.56
SMKR1H3BMG3 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 IGKV1-22-201ENST00000524313 326 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 AC130289.1-201ENST00000577321 73 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 MIR4696-201ENST00000581431 70 ntBASIC-0.98□□□□□ -2.57
SMKR1H3BMG3 RNU6-664P-201ENST00000362381 107 ntBASIC-0.99□□□□□ -2.57
SMKR1H3BMG3 SNORA20.1-201ENST00000364790 130 ntBASIC-0.99□□□□□ -2.57
SMKR1H3BMG3 SNORA49-201ENST00000386157 136 ntBASIC-0.99□□□□□ -2.57
SMKR1H3BMG3 RNU6-466P-201ENST00000391224 103 ntBASIC-0.99□□□□□ -2.57
SMKR1H3BMG3 SNORA13-201ENST00000458790 133 ntBASIC-0.99□□□□□ -2.57
SMKR1H3BMG3 RNA5SP285-201ENST00000516619 119 ntBASIC-0.99□□□□□ -2.57
SMKR1H3BMG3 AC145423.2-201ENST00000610631 239 ntBASIC-0.99□□□□□ -2.57
SMKR1H3BMG3 MIR6851-201ENST00000617060 67 ntBASIC-0.99□□□□□ -2.57
SMKR1H3BMG3 RNA5SP457-201ENST00000363657 124 ntBASIC-1□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.459-201ENST00000384251 102 ntBASIC-1□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.601-201ENST00000410500 113 ntBASIC-1□□□□□ -2.57
SMKR1H3BMG3 RNA5SP451-201ENST00000410588 110 ntBASIC-1□□□□□ -2.57
SMKR1H3BMG3 snoU13.13-201ENST00000458842 104 ntBASIC-1□□□□□ -2.57
SMKR1H3BMG3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1□□□□□ -2.57
SMKR1H3BMG3 MIR4493-201ENST00000584016 73 ntBASIC-1□□□□□ -2.57
SMKR1H3BMG3 AC062037.2-201ENST00000610137 73 ntBASIC-1□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 RNU6-363P-201ENST00000362895 105 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 MIR1302-3-201ENST00000408128 138 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 MTCYBP9-201ENST00000431021 303 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 AC022559.1-201ENST00000520905 205 ntBASIC-1.01□□□□□ -2.57
SMKR1H3BMG3 RNU6-235P-201ENST00000362644 107 ntBASIC-1.02□□□□□ -2.57
SMKR1H3BMG3 RNU6-935P-201ENST00000410371 100 ntBASIC-1.02□□□□□ -2.57
SMKR1H3BMG3 RNA5SP136-201ENST00000410906 107 ntBASIC-1.02□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.02□□□□□ -2.57
SMKR1H3BMG3 SNORD38.3-201ENST00000516599 73 ntBASIC-1.02□□□□□ -2.57
SMKR1H3BMG3 U4.1-201ENST00000620349 87 ntBASIC-1.02□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.03□□□□□ -2.57
SMKR1H3BMG3 RNA5SP257-201ENST00000363023 116 ntBASIC-1.03□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.03□□□□□ -2.57
SMKR1H3BMG3 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.03□□□□□ -2.57
SMKR1H3BMG3 RNU6-738P-201ENST00000384531 106 ntBASIC-1.03□□□□□ -2.57
SMKR1H3BMG3 MIR548D2-201ENST00000384955 97 ntBASIC-1.03□□□□□ -2.57
SMKR1H3BMG3 RN7SKP19-201ENST00000516016 252 ntBASIC-1.03□□□□□ -2.57
SMKR1H3BMG3 AC072026.1-201ENST00000605023 201 ntBASIC-1.03□□□□□ -2.57
SMKR1H3BMG3 SNORD114-4-201ENST00000363962 75 ntBASIC-1.05□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.05□□□□□ -2.58
SMKR1H3BMG3 RNU6-86P-201ENST00000606534 107 ntBASIC-1.05□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.05□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.05□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.05□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.05□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.05□□□□□ -2.58
SMKR1H3BMG3 RNU6-502P-201ENST00000362419 108 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 RNU6-647P-201ENST00000364243 107 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 RNU6-973P-201ENST00000364690 107 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 RNU6-915P-201ENST00000364943 103 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 RNU4-11P-201ENST00000365287 132 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 RNU6-409P-201ENST00000384114 104 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 MIR568-201ENST00000385036 95 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 MIR1263-201ENST00000408324 86 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 RNU6-735P-201ENST00000410612 107 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 AL353813.1-201ENST00000440700 253 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 RNU7-197P-201ENST00000458836 62 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 snoU13.11-201ENST00000459219 104 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 AP002392.1-201ENST00000537692 208 ntBASIC-1.06□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 SNORA63-201ENST00000363450 132 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 MIR518B-201ENST00000385127 83 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 U3.27-201ENST00000391237 200 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 RNU6-881P-201ENST00000516813 102 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 RNA5SP480-201ENST00000516840 109 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.07□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.08□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.08□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.08□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 249.6 ms