Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RNU7-74P-201ENST00000459104 62 ntBASIC2.13□□□□□ -2.07
RNF223E7ERA6 AC018659.1-201ENST00000551083 169 ntBASIC2.13□□□□□ -2.07
RNF223E7ERA6 AC023827.1-201ENST00000569247 97 ntBASIC2.13□□□□□ -2.07
RNF223E7ERA6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RNF223E7ERA6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RNF223E7ERA6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RNF223E7ERA6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 MIR548C-201ENST00000384815 97 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 SNORD113-2-201ENST00000391082 72 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 SNORD88.1-201ENST00000408684 91 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 RNU1-123P-201ENST00000458950 160 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 AC048334.1-201ENST00000477975 159 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 RN7SL499P-201ENST00000481141 276 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 MIR4648-201ENST00000580107 72 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
RNF223E7ERA6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.11□□□□□ -2.07
RNF223E7ERA6 MIR548AD-201ENST00000584780 82 ntBASIC2.11□□□□□ -2.07
RNF223E7ERA6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF223E7ERA6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.1□□□□□ -2.07
RNF223E7ERA6 MIR521-2-201ENST00000384818 87 ntBASIC2.1□□□□□ -2.07
RNF223E7ERA6 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
RNF223E7ERA6 MIR3937-201ENST00000580135 106 ntBASIC2.1□□□□□ -2.07
RNF223E7ERA6 AL157834.3-201ENST00000615543 103 ntBASIC2.1□□□□□ -2.07
RNF223E7ERA6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF223E7ERA6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF223E7ERA6 ZNF355P-201ENST00000427301 3216 ntBASIC2.09□□□□□ -2.07
RNF223E7ERA6 RNU6-698P-201ENST00000363523 107 ntBASIC2.09□□□□□ -2.07
RNF223E7ERA6 RNU6-34P-201ENST00000364874 107 ntBASIC2.09□□□□□ -2.07
RNF223E7ERA6 MIR517B-201ENST00000385102 67 ntBASIC2.09□□□□□ -2.07
RNF223E7ERA6 HMGN2P23-201ENST00000456759 269 ntBASIC2.09□□□□□ -2.07
RNF223E7ERA6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RNF223E7ERA6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF223E7ERA6 MT-TY-201ENST00000387409 66 ntBASIC2.08□□□□□ -2.08
RNF223E7ERA6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RNF223E7ERA6 MIR1289-2-201ENST00000408360 111 ntBASIC2.08□□□□□ -2.08
RNF223E7ERA6 RNU6-994P-201ENST00000410507 111 ntBASIC2.08□□□□□ -2.08
RNF223E7ERA6 snoU13.23-201ENST00000458863 104 ntBASIC2.08□□□□□ -2.08
RNF223E7ERA6 AC108210.2-201ENST00000503681 201 ntBASIC2.08□□□□□ -2.08
RNF223E7ERA6 AL512310.8-201ENST00000550183 120 ntBASIC2.08□□□□□ -2.08
RNF223E7ERA6 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
RNF223E7ERA6 AL591806.2-201ENST00000433122 173 ntBASIC2.07□□□□□ -2.08
RNF223E7ERA6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RNF223E7ERA6 SNORD114-4-201ENST00000363962 75 ntBASIC2.06□□□□□ -2.08
RNF223E7ERA6 U8.9-201ENST00000365667 134 ntBASIC2.06□□□□□ -2.08
RNF223E7ERA6 MIR100-201ENST00000385259 80 ntBASIC2.06□□□□□ -2.08
RNF223E7ERA6 AL591704.2-201ENST00000421658 181 ntBASIC2.06□□□□□ -2.08
RNF223E7ERA6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RNF223E7ERA6 SNORA31.2-201ENST00000516019 134 ntBASIC2.06□□□□□ -2.08
RNF223E7ERA6 RNU7-174P-201ENST00000516248 59 ntBASIC2.06□□□□□ -2.08
RNF223E7ERA6 AC015712.3-201ENST00000559380 164 ntBASIC2.06□□□□□ -2.08
RNF223E7ERA6 MIR4460-201ENST00000577862 86 ntBASIC2.06□□□□□ -2.08
RNF223E7ERA6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RNF223E7ERA6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RNF223E7ERA6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RNF223E7ERA6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
RNF223E7ERA6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RNF223E7ERA6 Y_RNA.363-201ENST00000365529 113 ntBASIC2.05□□□□□ -2.08
RNF223E7ERA6 MIR524-201ENST00000385242 87 ntBASIC2.05□□□□□ -2.08
RNF223E7ERA6 MIR764-201ENST00000390811 85 ntBASIC2.05□□□□□ -2.08
RNF223E7ERA6 RNA5SP210-201ENST00000391034 120 ntBASIC2.05□□□□□ -2.08
RNF223E7ERA6 RNU7-21P-201ENST00000459430 62 ntBASIC2.05□□□□□ -2.08
RNF223E7ERA6 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.05□□□□□ -2.08
RNF223E7ERA6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RNF223E7ERA6 MIR1-1-201ENST00000362147 71 ntBASIC2.04□□□□□ -2.08
RNF223E7ERA6 SNORD41.1-201ENST00000391000 69 ntBASIC2.04□□□□□ -2.08
RNF223E7ERA6 RNU7-119P-201ENST00000459279 63 ntBASIC2.04□□□□□ -2.08
RNF223E7ERA6 MIR1273D-201ENST00000577266 86 ntBASIC2.04□□□□□ -2.08
RNF223E7ERA6 AC046143.2-201ENST00000609789 160 ntBASIC2.04□□□□□ -2.08
RNF223E7ERA6 U2.7-201ENST00000619197 100 ntBASIC2.04□□□□□ -2.08
RNF223E7ERA6 U4.4-201ENST00000620626 117 ntBASIC2.04□□□□□ -2.08
RNF223E7ERA6 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
RNF223E7ERA6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RNF223E7ERA6 MIR520F-201ENST00000384824 87 ntBASIC2.03□□□□□ -2.08
RNF223E7ERA6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF223E7ERA6 AC021146.9-201ENST00000512503 156 ntBASIC2.03□□□□□ -2.08
RNF223E7ERA6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.03□□□□□ -2.08
RNF223E7ERA6 RNU6-980P-201ENST00000516925 103 ntBASIC2.03□□□□□ -2.08
RNF223E7ERA6 AL136317.1-201ENST00000612653 226 ntBASIC2.03□□□□□ -2.08
RNF223E7ERA6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.03□□□□□ -2.09
RNF223E7ERA6 RNA5SP99-201ENST00000364020 114 ntBASIC2.02□□□□□ -2.09
RNF223E7ERA6 MIR30A-201ENST00000385092 71 ntBASIC2.02□□□□□ -2.09
RNF223E7ERA6 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
RNF223E7ERA6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.02□□□□□ -2.09
RNF223E7ERA6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RNF223E7ERA6 RNU6-482P-201ENST00000391068 107 ntBASIC2.01□□□□□ -2.09
RNF223E7ERA6 snoU13.13-201ENST00000458842 104 ntBASIC2.01□□□□□ -2.09
RNF223E7ERA6 RNU6-135P-201ENST00000516769 101 ntBASIC2.01□□□□□ -2.09
RNF223E7ERA6 RN7SKP88-201ENST00000516847 250 ntBASIC2.01□□□□□ -2.09
RNF223E7ERA6 SNORA44.1-201ENST00000517031 108 ntBASIC2.01□□□□□ -2.09
RNF223E7ERA6 7SK.8-201ENST00000612110 250 ntBASIC2.01□□□□□ -2.09
RNF223E7ERA6 7SK.11-201ENST00000615477 250 ntBASIC2.01□□□□□ -2.09
RNF223E7ERA6 7SK.13-201ENST00000622040 250 ntBASIC2.01□□□□□ -2.09
RNF223E7ERA6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RNF223E7ERA6 SNORD114-1-201ENST00000362705 72 ntBASIC2□□□□□ -2.09
RNF223E7ERA6 SNORA80D-201ENST00000384488 135 ntBASIC2□□□□□ -2.09
RNF223E7ERA6 MIR934-201ENST00000401241 83 ntBASIC2□□□□□ -2.09
RNF223E7ERA6 RNU7-90P-201ENST00000459216 62 ntBASIC2□□□□□ -2.09
RNF223E7ERA6 AC026436.1-201ENST00000510537 270 ntBASIC2□□□□□ -2.09
RNF223E7ERA6 MIR4299-201ENST00000577899 72 ntBASIC2□□□□□ -2.09
RNF223E7ERA6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms