Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
MBD3L4A6NDZ8 Y_RNA.81-201ENST00000362997 102 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 SNORD45B-201ENST00000364617 72 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 MIR516A2-201ENST00000384888 90 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 MIR516A1-201ENST00000385033 90 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 SCARNA23-201ENST00000516060 130 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-795P-201ENST00000516323 103 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-109P-201ENST00000516364 107 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-184P-201ENST00000516514 107 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 MIR548Z-201ENST00000584743 97 ntBASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
MBD3L4A6NDZ8 RNU6-147P-201ENST00000383983 107 ntBASIC0.65□□□□□ -2.31
MBD3L4A6NDZ8 SNORD28-201ENST00000384706 75 ntBASIC0.65□□□□□ -2.31
MBD3L4A6NDZ8 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
MBD3L4A6NDZ8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
MBD3L4A6NDZ8 MIR1273G-201ENST00000577677 100 ntBASIC0.65□□□□□ -2.31
MBD3L4A6NDZ8 AC012531.4-201ENST00000616509 177 ntBASIC0.65□□□□□ -2.31
MBD3L4A6NDZ8 AC244669.1-204ENST00000621564 178 ntBASIC0.65□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.95-201ENST00000363079 95 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.221-201ENST00000364248 96 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 RNA5SP517-201ENST00000364724 117 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 MIR519A1-201ENST00000385257 85 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 RNU7-106P-201ENST00000459514 67 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 RNA5SP47-201ENST00000517230 109 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 MIR4777-201ENST00000583710 86 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-86P-201ENST00000606534 107 ntBASIC0.64□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.30-201ENST00000362572 97 ntBASIC0.63□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-1244P-201ENST00000363614 108 ntBASIC0.63□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.467-201ENST00000384297 102 ntBASIC0.63□□□□□ -2.31
MBD3L4A6NDZ8 RNU7-104P-201ENST00000459398 79 ntBASIC0.63□□□□□ -2.31
MBD3L4A6NDZ8 RNA5SP227-201ENST00000516184 113 ntBASIC0.63□□□□□ -2.31
MBD3L4A6NDZ8 MIR4439-201ENST00000583746 80 ntBASIC0.63□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.818-201ENST00000618813 71 ntBASIC0.63□□□□□ -2.31
MBD3L4A6NDZ8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.63□□□□□ -2.31
MBD3L4A6NDZ8 SNORA36.1-201ENST00000363424 132 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-153P-201ENST00000364422 104 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-243P-201ENST00000391140 107 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-1254P-201ENST00000391266 104 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 MIR548L-201ENST00000408303 86 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 SNORD71-201ENST00000411292 86 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 RNA5SP268-201ENST00000516828 124 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 SNORA25.18-201ENST00000607153 114 ntBASIC0.62□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-1125P-201ENST00000363601 107 ntBASIC0.61□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-480P-201ENST00000384332 107 ntBASIC0.61□□□□□ -2.31
MBD3L4A6NDZ8 MIR181B2-201ENST00000385004 89 ntBASIC0.61□□□□□ -2.31
MBD3L4A6NDZ8 SNORA40.8-201ENST00000411034 126 ntBASIC0.61□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.107-201ENST00000363190 121 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-32P-201ENST00000383948 107 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-13P-201ENST00000384248 107 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-12P-201ENST00000384604 107 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.544-201ENST00000384650 113 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-813P-201ENST00000384691 107 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-41P-201ENST00000384741 107 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 RNU7-161P-201ENST00000517289 62 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 AC010487.4-201ENST00000637027 61 ntBASIC0.6□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-1260P-201ENST00000362944 107 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.93-201ENST00000363066 109 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-716P-201ENST00000365621 103 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-524P-201ENST00000384270 107 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 Y_RNA.495-201ENST00000384435 112 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 RNU6-644P-201ENST00000391155 98 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 AC103810.7-201ENST00000607821 91 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 AC025521.1-201ENST00000621624 286 ntBASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.59□□□□□ -2.31
MBD3L4A6NDZ8 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
MBD3L4A6NDZ8 SNORD36A-201ENST00000362874 73 ntBASIC0.58□□□□□ -2.32
MBD3L4A6NDZ8 RNA5SP457-201ENST00000363657 124 ntBASIC0.58□□□□□ -2.32
MBD3L4A6NDZ8 RNU7-61P-201ENST00000515897 61 ntBASIC0.58□□□□□ -2.32
MBD3L4A6NDZ8 AP001318.4-201ENST00000616637 121 ntBASIC0.58□□□□□ -2.32
MBD3L4A6NDZ8 Y_RNA.705-201ENST00000516862 110 ntBASIC0.57□□□□□ -2.32
MBD3L4A6NDZ8 MIR4711-201ENST00000578274 70 ntBASIC0.57□□□□□ -2.32
MBD3L4A6NDZ8 MIR7107-201ENST00000611489 80 ntBASIC0.57□□□□□ -2.32
MBD3L4A6NDZ8 MIR6828-201ENST00000636181 60 ntBASIC0.57□□□□□ -2.32
MBD3L4A6NDZ8 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
MBD3L4A6NDZ8 Y_RNA.115-201ENST00000363272 98 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 RNA5SP403-201ENST00000363598 108 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 MIR518A1-201ENST00000385068 85 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 MTATP8P2-201ENST00000435212 202 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 RN7SKP12-201ENST00000516275 143 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 RNA5SP330-201ENST00000517096 96 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 RNU6-158P-201ENST00000517104 100 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 AL513043.2-201ENST00000573941 143 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 AC067863.3-201ENST00000624172 122 ntBASIC0.56□□□□□ -2.32
MBD3L4A6NDZ8 SNORD118-201ENST00000363593 134 ntBASIC0.55□□□□□ -2.32
MBD3L4A6NDZ8 Y_RNA.348-201ENST00000365403 103 ntBASIC0.55□□□□□ -2.32
MBD3L4A6NDZ8 RNU6-972P-201ENST00000391208 107 ntBASIC0.55□□□□□ -2.32
MBD3L4A6NDZ8 RNU6-887P-201ENST00000410660 100 ntBASIC0.55□□□□□ -2.32
MBD3L4A6NDZ8 RNU6-168P-201ENST00000516189 101 ntBASIC0.55□□□□□ -2.32
MBD3L4A6NDZ8 SNORA40.13-201ENST00000516379 120 ntBASIC0.55□□□□□ -2.32
MBD3L4A6NDZ8 Y_RNA.96-201ENST00000363092 109 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms