Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
TCRBV7S3A2A0A539 AC012531.4-201ENST00000616509 177 ntBASIC0.48□□□□□ -2.33
TCRBV7S3A2A0A539 MIR8070-201ENST00000616510 88 ntBASIC0.48□□□□□ -2.33
TCRBV7S3A2A0A539 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-756P-201ENST00000383997 107 ntBASIC0.47□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-1126P-201ENST00000384002 107 ntBASIC0.47□□□□□ -2.33
TCRBV7S3A2A0A539 Y_RNA.466-201ENST00000384294 113 ntBASIC0.47□□□□□ -2.33
TCRBV7S3A2A0A539 RNU7-104P-201ENST00000459398 79 ntBASIC0.47□□□□□ -2.33
TCRBV7S3A2A0A539 RNU6-863P-201ENST00000515989 104 ntBASIC0.47□□□□□ -2.33
TCRBV7S3A2A0A539 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
TCRBV7S3A2A0A539 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
TCRBV7S3A2A0A539 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.46□□□□□ -2.34
TCRBV7S3A2A0A539 AL031737.1-201ENST00000450125 223 ntBASIC0.46□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-795P-201ENST00000516323 103 ntBASIC0.46□□□□□ -2.34
TCRBV7S3A2A0A539 MIR6504-201ENST00000613520 61 ntBASIC0.46□□□□□ -2.34
TCRBV7S3A2A0A539 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.46□□□□□ -2.34
TCRBV7S3A2A0A539 Y_RNA.96-201ENST00000363092 109 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 Y_RNA.467-201ENST00000384297 102 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 RNU2-59P-201ENST00000410482 191 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 AL035461.1-201ENST00000421490 332 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 MIR3920-201ENST00000581751 86 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 MIR548Z-201ENST00000584743 97 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 AL162376.1-201ENST00000624117 175 ntBASIC0.45□□□□□ -2.34
TCRBV7S3A2A0A539 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 Y_RNA.93-201ENST00000363066 109 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 SNORD115-44-201ENST00000365391 82 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-644P-201ENST00000391155 98 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 MIR548J-201ENST00000408833 112 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 Y_RNA.648-201ENST00000459455 110 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-848P-201ENST00000515948 107 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-617P-201ENST00000516147 107 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-473P-201ENST00000516164 107 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 RNU7-13P-201ENST00000516413 62 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-1049P-201ENST00000516414 107 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 MIR3124-201ENST00000582636 67 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 AC025521.1-201ENST00000621624 286 ntBASIC0.44□□□□□ -2.34
TCRBV7S3A2A0A539 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-716P-201ENST00000365621 103 ntBASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-972P-201ENST00000391208 107 ntBASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 Y_RNA.705-201ENST00000516862 110 ntBASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-158P-201ENST00000517104 100 ntBASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 AL513043.2-201ENST00000573941 143 ntBASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 MTRNR2L2-201ENST00000604882 87 ntBASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 AC103810.7-201ENST00000607821 91 ntBASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 TRDV1-202ENST00000621643 102 ntBASIC0.43□□□□□ -2.34
TCRBV7S3A2A0A539 Y_RNA.544-201ENST00000384650 113 ntBASIC0.42□□□□□ -2.34
TCRBV7S3A2A0A539 MIR216A-201ENST00000385063 110 ntBASIC0.42□□□□□ -2.34
TCRBV7S3A2A0A539 MIR548L-201ENST00000408303 86 ntBASIC0.42□□□□□ -2.34
TCRBV7S3A2A0A539 AC069271.1-201ENST00000445577 156 ntBASIC0.42□□□□□ -2.34
TCRBV7S3A2A0A539 MIR6788-201ENST00000618842 66 ntBASIC0.42□□□□□ -2.34
TCRBV7S3A2A0A539 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
TCRBV7S3A2A0A539 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-957P-201ENST00000363652 99 ntBASIC0.41□□□□□ -2.34
TCRBV7S3A2A0A539 RNU6-466P-201ENST00000391224 103 ntBASIC0.41□□□□□ -2.34
TCRBV7S3A2A0A539 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
TCRBV7S3A2A0A539 snoU13.11-201ENST00000459219 104 ntBASIC0.41□□□□□ -2.34
TCRBV7S3A2A0A539 MIR4452-201ENST00000583004 71 ntBASIC0.41□□□□□ -2.34
TCRBV7S3A2A0A539 Y_RNA.107-201ENST00000363190 121 ntBASIC0.4□□□□□ -2.35
TCRBV7S3A2A0A539 Y_RNA.191-201ENST00000363972 113 ntBASIC0.4□□□□□ -2.35
TCRBV7S3A2A0A539 Y_RNA.283-201ENST00000364798 112 ntBASIC0.4□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-887P-201ENST00000410660 100 ntBASIC0.4□□□□□ -2.35
TCRBV7S3A2A0A539 RNU7-74P-201ENST00000459104 62 ntBASIC0.4□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-109P-201ENST00000516364 107 ntBASIC0.4□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-184P-201ENST00000516514 107 ntBASIC0.4□□□□□ -2.35
TCRBV7S3A2A0A539 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.4□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-44P-201ENST00000384045 107 ntBASIC0.39□□□□□ -2.35
TCRBV7S3A2A0A539 Y_RNA.596-201ENST00000410462 109 ntBASIC0.39□□□□□ -2.35
TCRBV7S3A2A0A539 AL161932.1-201ENST00000437408 146 ntBASIC0.39□□□□□ -2.35
TCRBV7S3A2A0A539 MIR5000-201ENST00000577717 103 ntBASIC0.39□□□□□ -2.35
TCRBV7S3A2A0A539 MIR450A1-201ENST00000362262 91 ntBASIC0.38□□□□□ -2.35
TCRBV7S3A2A0A539 RNA5SP347-201ENST00000362445 119 ntBASIC0.38□□□□□ -2.35
TCRBV7S3A2A0A539 SNORA63.4-201ENST00000362763 126 ntBASIC0.38□□□□□ -2.35
TCRBV7S3A2A0A539 Y_RNA.164-201ENST00000363709 102 ntBASIC0.38□□□□□ -2.35
TCRBV7S3A2A0A539 SNORD58A-201ENST00000383875 65 ntBASIC0.38□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-269P-201ENST00000391077 97 ntBASIC0.38□□□□□ -2.35
TCRBV7S3A2A0A539 MIR548AG2-201ENST00000581228 64 ntBASIC0.38□□□□□ -2.35
TCRBV7S3A2A0A539 U6.100-201ENST00000636230 99 ntBASIC0.38□□□□□ -2.35
TCRBV7S3A2A0A539 MIR103A1-201ENST00000362165 78 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 MIR617-201ENST00000385030 97 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-75P-201ENST00000515944 104 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 MIR6755-201ENST00000619993 66 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 MIR2052-201ENST00000636055 55 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 AC073869.9-201ENST00000641610 120 ntBASIC0.37□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-509P-201ENST00000363519 107 ntBASIC0.36□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-147P-201ENST00000383983 107 ntBASIC0.36□□□□□ -2.35
TCRBV7S3A2A0A539 MTATP8P2-201ENST00000435212 202 ntBASIC0.36□□□□□ -2.35
TCRBV7S3A2A0A539 RNU7-61P-201ENST00000515897 61 ntBASIC0.36□□□□□ -2.35
TCRBV7S3A2A0A539 RNU6-287P-201ENST00000516230 98 ntBASIC0.36□□□□□ -2.35
TCRBV7S3A2A0A539 MIR5706-201ENST00000579841 80 ntBASIC0.36□□□□□ -2.35
TCRBV7S3A2A0A539 MIR151B-201ENST00000584249 96 ntBASIC0.36□□□□□ -2.35
TCRBV7S3A2A0A539 SNORD116-10-201ENST00000363791 102 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms