Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.07□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.08□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-363P-201ENST00000362895 105 ntBASIC-0.08□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-957P-201ENST00000363652 99 ntBASIC-0.08□□□□□ -2.42
TRAV40A0A0B4J280 RNA5SP136-201ENST00000410906 107 ntBASIC-0.08□□□□□ -2.42
TRAV40A0A0B4J280 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.08□□□□□ -2.42
TRAV40A0A0B4J280 AC025166.1-201ENST00000612411 163 ntBASIC-0.08□□□□□ -2.42
TRAV40A0A0B4J280 AL035470.1-201ENST00000622571 220 ntBASIC-0.08□□□□□ -2.42
TRAV40A0A0B4J280 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
TRAV40A0A0B4J280 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 RNU1-141P-201ENST00000364623 158 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 AC093423.1-201ENST00000440817 142 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 RNU6-772P-201ENST00000516042 105 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 MIR548AE1-201ENST00000583292 70 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 MIR4473-201ENST00000583731 91 ntBASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.09□□□□□ -2.42
TRAV40A0A0B4J280 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 SNORA51.5-201ENST00000384126 131 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-816P-201ENST00000390914 107 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 MIR548G-201ENST00000408442 89 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 MIR2113-201ENST00000459007 91 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-287P-201ENST00000516230 98 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-971P-201ENST00000516920 106 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 MIR3613-201ENST00000579844 87 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 RN7SL660P-201ENST00000614852 299 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 TRDV1-202ENST00000621643 102 ntBASIC-0.1□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-409P-201ENST00000384114 104 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 MIR516B1-201ENST00000385211 90 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 RNU7-165P-201ENST00000458864 60 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 snoU13.11-201ENST00000459219 104 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 RNA5SP285-201ENST00000516619 119 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 AL670379.3-201ENST00000605040 251 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 AC073869.9-201ENST00000641610 120 ntBASIC-0.11□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-652P-201ENST00000365488 107 ntBASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 MIR329-2-201ENST00000385029 84 ntBASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-180P-201ENST00000516697 61 ntBASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 YWHAEP2-201ENST00000580066 112 ntBASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-90P-201ENST00000606352 106 ntBASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 MIR6514-201ENST00000622549 70 ntBASIC-0.12□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-509P-201ENST00000363519 107 ntBASIC-0.13□□□□□ -2.43
TRAV40A0A0B4J280 SNORD38.1-201ENST00000363863 68 ntBASIC-0.13□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.13□□□□□ -2.43
TRAV40A0A0B4J280 MIR577-201ENST00000385196 96 ntBASIC-0.13□□□□□ -2.43
TRAV40A0A0B4J280 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.13□□□□□ -2.43
TRAV40A0A0B4J280 SNORA25.13-201ENST00000516395 103 ntBASIC-0.13□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-794P-201ENST00000517261 64 ntBASIC-0.13□□□□□ -2.43
TRAV40A0A0B4J280 AL442128.1-201ENST00000615151 90 ntBASIC-0.13□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 RNY4P6-201ENST00000363667 96 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 SNORD38.2-201ENST00000384470 69 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 MIR617-201ENST00000385030 97 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 SNORA40-201ENST00000388090 126 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-907P-201ENST00000390924 102 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-243P-201ENST00000391140 107 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 RNU7-159P-201ENST00000459284 62 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 AC084368.1-201ENST00000620935 65 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 AL162726.3-218ENST00000636401 95 ntBASIC-0.14□□□□□ -2.43
TRAV40A0A0B4J280 AL157777.2-201ENST00000258070 137 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 RNU6-774P-201ENST00000363238 107 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 MIR181B2-201ENST00000385004 89 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 MIR876-201ENST00000401147 81 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 SNORD33.1-201ENST00000516213 88 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 RNU7-188P-201ENST00000517063 64 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 AC025521.1-201ENST00000621624 286 ntBASIC-0.15□□□□□ -2.43
TRAV40A0A0B4J280 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.16□□□□□ -2.44
TRAV40A0A0B4J280 MIR548A1-201ENST00000385041 97 ntBASIC-0.16□□□□□ -2.44
TRAV40A0A0B4J280 AC109327.2-201ENST00000448339 378 ntBASIC-0.16□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.16□□□□□ -2.44
TRAV40A0A0B4J280 MIR548Z-201ENST00000584743 97 ntBASIC-0.16□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-86P-201ENST00000606534 107 ntBASIC-0.16□□□□□ -2.44
TRAV40A0A0B4J280 U7.6-201ENST00000610841 64 ntBASIC-0.16□□□□□ -2.44
TRAV40A0A0B4J280 MIR6759-201ENST00000638110 65 ntBASIC-0.16□□□□□ -2.44
TRAV40A0A0B4J280 MT-TR-201ENST00000387439 65 ntBASIC-0.17□□□□□ -2.44
TRAV40A0A0B4J280 AC141557.1-201ENST00000540982 400 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms