Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 SNORD115-17-201ENST00000364612 82 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-480P-201ENST00000384332 107 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-460P-201ENST00000391158 108 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 RPS29P8-201ENST00000445109 171 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 IGKV1-22-201ENST00000524313 326 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 AC072026.1-201ENST00000605023 201 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 AC141273.2-201ENST00000618989 130 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 U6.100-201ENST00000636230 99 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 RNA5SP368-201ENST00000364298 116 ntBASIC-0.62□□□□□ -2.51
TRAV39A0A0B4J263 SNORD14C-201ENST00000365382 88 ntBASIC-0.62□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-455P-201ENST00000384681 107 ntBASIC-0.62□□□□□ -2.51
TRAV39A0A0B4J263 MT-TY-201ENST00000387409 66 ntBASIC-0.62□□□□□ -2.51
TRAV39A0A0B4J263 MIR759-201ENST00000390224 91 ntBASIC-0.62□□□□□ -2.51
TRAV39A0A0B4J263 AC074198.2-201ENST00000508153 258 ntBASIC-0.62□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-175P-201ENST00000516896 107 ntBASIC-0.62□□□□□ -2.51
TRAV39A0A0B4J263 AL590491.3-201ENST00000610731 82 ntBASIC-0.62□□□□□ -2.51
TRAV39A0A0B4J263 SNORD36A-201ENST00000362874 73 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 MIR539-201ENST00000365690 78 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 SNORA32.3-201ENST00000384772 121 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 MIR224-201ENST00000384889 81 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 MIR196A2-201ENST00000385189 110 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 MIR1263-201ENST00000408324 86 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 AC114755.3-201ENST00000481111 251 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 AP002392.1-201ENST00000537692 208 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 MIR3121-201ENST00000579680 77 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.63□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-957P-201ENST00000363652 99 ntBASIC-0.64□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.64□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-915P-201ENST00000364943 103 ntBASIC-0.64□□□□□ -2.51
TRAV39A0A0B4J263 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
TRAV39A0A0B4J263 RNA5SP25-201ENST00000410815 110 ntBASIC-0.64□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.64□□□□□ -2.51
TRAV39A0A0B4J263 MIR4503-201ENST00000582187 83 ntBASIC-0.64□□□□□ -2.51
TRAV39A0A0B4J263 AC108676.2-201ENST00000605225 163 ntBASIC-0.64□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.65□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-574P-201ENST00000384265 107 ntBASIC-0.65□□□□□ -2.51
TRAV39A0A0B4J263 SNORD75.1-201ENST00000408373 60 ntBASIC-0.65□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-90P-201ENST00000606352 106 ntBASIC-0.65□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-151P-201ENST00000364158 107 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 MIR548G-201ENST00000408442 89 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-735P-201ENST00000410612 107 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-284P-201ENST00000411105 106 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 RN7SKP19-201ENST00000516016 252 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-861P-201ENST00000516745 106 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 AP000676.1-201ENST00000533307 52 ntBASIC-0.66□□□□□ -2.52
TRAV39A0A0B4J263 MIR20A-201ENST00000362279 71 ntBASIC-0.67□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.67□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.67□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.67□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.67□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-196P-201ENST00000384315 107 ntBASIC-0.67□□□□□ -2.52
TRAV39A0A0B4J263 RNA5SP66-201ENST00000517178 101 ntBASIC-0.67□□□□□ -2.52
TRAV39A0A0B4J263 uc_338.36-201ENST00000622331 158 ntBASIC-0.67□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 SNORD114-15-201ENST00000364687 72 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 MIR652-201ENST00000385278 98 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 AL445193.1-201ENST00000441183 141 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 MIR6086-201ENST00000638065 55 ntBASIC-0.68□□□□□ -2.52
TRAV39A0A0B4J263 SNORD38.1-201ENST00000363863 68 ntBASIC-0.69□□□□□ -2.52
TRAV39A0A0B4J263 RNU7-197P-201ENST00000458836 62 ntBASIC-0.69□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.69□□□□□ -2.52
TRAV39A0A0B4J263 MIR4432-201ENST00000581823 84 ntBASIC-0.69□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 MIR548D2-201ENST00000384955 97 ntBASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-466P-201ENST00000391224 103 ntBASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 MTND3P2-201ENST00000438452 342 ntBASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 AC007012.1-201ENST00000567192 175 ntBASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 FTX_2.1-201ENST00000618816 94 ntBASIC-0.7□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-363P-201ENST00000362895 105 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 SNORD101-201ENST00000384027 73 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 MIR513C-201ENST00000401352 84 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 RNA5SP136-201ENST00000410906 107 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.71□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.72□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-647P-201ENST00000364243 107 ntBASIC-0.72□□□□□ -2.52
TRAV39A0A0B4J263 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.72□□□□□ -2.52
TRAV39A0A0B4J263 RNU6-409P-201ENST00000384114 104 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms