Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 MIR4676-201ENST00000583078 72 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 AL136317.1-201ENST00000612653 226 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 Y_RNA.10-201ENST00000362371 110 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.93-201ENST00000363066 109 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 MIR488-201ENST00000365739 83 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.467-201ENST00000384297 102 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 MIR532-201ENST00000385025 91 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 AC109327.2-201ENST00000448339 378 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 SNRPGP12-201ENST00000449481 213 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 U7.7-201ENST00000459276 60 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.677-201ENST00000516401 85 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-531P-201ENST00000516694 104 ntBASIC1.15□□□□□ -2.23
NR2E3Q9Y5X4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 MIR548G-201ENST00000408442 89 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 MIR1257-201ENST00000408490 117 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 RNU4-83P-201ENST00000410863 133 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 MIR4804-201ENST00000581683 73 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 SNORD92-201ENST00000585078 85 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 MIR6082-201ENST00000613604 109 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 MIR6513-201ENST00000621188 64 ntBASIC1.14□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.107-201ENST00000363190 121 ntBASIC1.13□□□□□ -2.23
NR2E3Q9Y5X4 MIR100-201ENST00000385259 80 ntBASIC1.13□□□□□ -2.23
NR2E3Q9Y5X4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.13□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.659-201ENST00000515994 113 ntBASIC1.13□□□□□ -2.23
NR2E3Q9Y5X4 RNA5SP476-201ENST00000516613 103 ntBASIC1.13□□□□□ -2.23
NR2E3Q9Y5X4 MIR4500-201ENST00000579472 76 ntBASIC1.13□□□□□ -2.23
NR2E3Q9Y5X4 AC008608.1-201ENST00000603910 127 ntBASIC1.13□□□□□ -2.23
NR2E3Q9Y5X4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.13□□□□□ -2.23
NR2E3Q9Y5X4 RNA5SP62-201ENST00000363457 110 ntBASIC1.12□□□□□ -2.23
NR2E3Q9Y5X4 SNORD45B-201ENST00000364617 72 ntBASIC1.12□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-644P-201ENST00000391155 98 ntBASIC1.12□□□□□ -2.23
NR2E3Q9Y5X4 RNU7-56P-201ENST00000458744 62 ntBASIC1.12□□□□□ -2.23
NR2E3Q9Y5X4 SNORA40.13-201ENST00000516379 120 ntBASIC1.12□□□□□ -2.23
NR2E3Q9Y5X4 MIR3973-201ENST00000579824 107 ntBASIC1.12□□□□□ -2.23
NR2E3Q9Y5X4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.12□□□□□ -2.23
NR2E3Q9Y5X4 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-403P-201ENST00000363163 104 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.342-201ENST00000365352 113 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 SNORD89-201ENST00000390981 114 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 BX276092.1-201ENST00000427368 251 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 RNA5SP255-201ENST00000516370 107 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 MIR4439-201ENST00000583746 80 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 AC013244.2-201ENST00000603396 103 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 AC096720.1-201ENST00000604441 183 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-90P-201ENST00000606352 106 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-86P-201ENST00000606534 107 ntBASIC1.11□□□□□ -2.23
NR2E3Q9Y5X4 HAR1A.1-201ENST00000459583 118 ntBASIC1.1□□□□□ -2.23
NR2E3Q9Y5X4 RNU7-61P-201ENST00000515897 61 ntBASIC1.1□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.1□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-977P-201ENST00000516411 103 ntBASIC1.1□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-765P-201ENST00000516916 99 ntBASIC1.1□□□□□ -2.23
NR2E3Q9Y5X4 RNU7-156P-201ENST00000517214 74 ntBASIC1.1□□□□□ -2.23
NR2E3Q9Y5X4 AC025627.3-201ENST00000582078 182 ntBASIC1.1□□□□□ -2.23
NR2E3Q9Y5X4 RNU4-58P-201ENST00000363192 141 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.290-201ENST00000364879 114 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 SNORA72.6-201ENST00000384520 129 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 MIR938-201ENST00000401216 83 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 SPINT5P-201ENST00000448174 155 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 RNU7-102P-201ENST00000458948 62 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 RNU6-850P-201ENST00000516934 103 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 MIR4714-201ENST00000580728 77 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 MIR8087-201ENST00000612745 78 ntBASIC1.09□□□□□ -2.23
NR2E3Q9Y5X4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NR2E3Q9Y5X4 Y_RNA.258-201ENST00000364613 105 ntBASIC1.08□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-571P-201ENST00000384128 107 ntBASIC1.08□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-813P-201ENST00000384691 107 ntBASIC1.08□□□□□ -2.24
NR2E3Q9Y5X4 MIR936-201ENST00000401264 98 ntBASIC1.08□□□□□ -2.24
NR2E3Q9Y5X4 Y_RNA.694-201ENST00000516677 117 ntBASIC1.08□□□□□ -2.24
NR2E3Q9Y5X4 RNA5SP170-201ENST00000517150 101 ntBASIC1.08□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-716P-201ENST00000365621 103 ntBASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-49P-201ENST00000384256 107 ntBASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 SNORD38.2-201ENST00000384470 69 ntBASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 SNORD100-201ENST00000408573 76 ntBASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 MTND5P40-201ENST00000559945 246 ntBASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 MALAT1.1-201ENST00000618249 95 ntBASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
NR2E3Q9Y5X4 MIR520F-201ENST00000384824 87 ntBASIC1.06□□□□□ -2.24
NR2E3Q9Y5X4 SNORD105-201ENST00000386910 85 ntBASIC1.06□□□□□ -2.24
NR2E3Q9Y5X4 MIR5582-201ENST00000579697 68 ntBASIC1.06□□□□□ -2.24
NR2E3Q9Y5X4 AC103810.7-201ENST00000607821 91 ntBASIC1.06□□□□□ -2.24
NR2E3Q9Y5X4 U7.3-201ENST00000616123 62 ntBASIC1.06□□□□□ -2.24
NR2E3Q9Y5X4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
NR2E3Q9Y5X4 RNU6-364P-201ENST00000384387 107 ntBASIC1.05□□□□□ -2.24
NR2E3Q9Y5X4 RNY1P7-201ENST00000384743 110 ntBASIC1.05□□□□□ -2.24
NR2E3Q9Y5X4 MIR181B2-201ENST00000385004 89 ntBASIC1.05□□□□□ -2.24
NR2E3Q9Y5X4 RNU7-106P-201ENST00000459514 67 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms