Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
GTF3C3Q9Y5Q9 AC244669.1-204ENST00000621564 178 ntBASIC1.11□□□□□ -2.23
GTF3C3Q9Y5Q9 RNU7-195P-201ENST00000458793 62 ntBASIC1.1□□□□□ -2.23
GTF3C3Q9Y5Q9 RNU6-919P-201ENST00000516731 104 ntBASIC1.1□□□□□ -2.23
GTF3C3Q9Y5Q9 Y_RNA.96-201ENST00000363092 109 ntBASIC1.09□□□□□ -2.23
GTF3C3Q9Y5Q9 MIR516A2-201ENST00000384888 90 ntBASIC1.09□□□□□ -2.23
GTF3C3Q9Y5Q9 MIR516A1-201ENST00000385033 90 ntBASIC1.09□□□□□ -2.23
GTF3C3Q9Y5Q9 SNORD71-201ENST00000411292 86 ntBASIC1.09□□□□□ -2.23
GTF3C3Q9Y5Q9 AC091304.10-201ENST00000641554 121 ntBASIC1.09□□□□□ -2.23
GTF3C3Q9Y5Q9 RNU6-1163P-201ENST00000364516 107 ntBASIC1.08□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU6-106P-201ENST00000384405 107 ntBASIC1.08□□□□□ -2.24
GTF3C3Q9Y5Q9 SCARNA23-201ENST00000516060 130 ntBASIC1.08□□□□□ -2.24
GTF3C3Q9Y5Q9 RN7SKP12-201ENST00000516275 143 ntBASIC1.08□□□□□ -2.24
GTF3C3Q9Y5Q9 RNY1P8-201ENST00000383970 114 ntBASIC1.07□□□□□ -2.24
GTF3C3Q9Y5Q9 SNORA51.5-201ENST00000384126 131 ntBASIC1.07□□□□□ -2.24
GTF3C3Q9Y5Q9 SNORA40.8-201ENST00000411034 126 ntBASIC1.07□□□□□ -2.24
GTF3C3Q9Y5Q9 AC109327.2-201ENST00000448339 378 ntBASIC1.07□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU7-106P-201ENST00000459514 67 ntBASIC1.07□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU4-54P-201ENST00000516428 129 ntBASIC1.07□□□□□ -2.24
GTF3C3Q9Y5Q9 Y_RNA.95-201ENST00000363079 95 ntBASIC1.06□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU6-215P-201ENST00000365169 102 ntBASIC1.06□□□□□ -2.24
GTF3C3Q9Y5Q9 RNY4P18-201ENST00000391107 89 ntBASIC1.06□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU6-904P-201ENST00000516206 101 ntBASIC1.06□□□□□ -2.24
GTF3C3Q9Y5Q9 RNA5SP268-201ENST00000516828 124 ntBASIC1.06□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU6-86P-201ENST00000606534 107 ntBASIC1.06□□□□□ -2.24
GTF3C3Q9Y5Q9 snoU13.31-201ENST00000607291 104 ntBASIC1.06□□□□□ -2.24
GTF3C3Q9Y5Q9 MIR6828-201ENST00000636181 60 ntBASIC1.06□□□□□ -2.24
GTF3C3Q9Y5Q9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.05□□□□□ -2.24
GTF3C3Q9Y5Q9 SNORD20-201ENST00000384550 80 ntBASIC1.05□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
GTF3C3Q9Y5Q9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.05□□□□□ -2.24
GTF3C3Q9Y5Q9 Y_RNA.221-201ENST00000364248 96 ntBASIC1.04□□□□□ -2.24
GTF3C3Q9Y5Q9 RNA5SP517-201ENST00000364724 117 ntBASIC1.04□□□□□ -2.24
GTF3C3Q9Y5Q9 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
GTF3C3Q9Y5Q9 RNA5SP227-201ENST00000516184 113 ntBASIC1.04□□□□□ -2.24
GTF3C3Q9Y5Q9 MIR3613-201ENST00000579844 87 ntBASIC1.04□□□□□ -2.24
GTF3C3Q9Y5Q9 AC067863.3-201ENST00000624172 122 ntBASIC1.04□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU6-945P-201ENST00000383947 107 ntBASIC1.03□□□□□ -2.24
GTF3C3Q9Y5Q9 RNU6-756P-201ENST00000383997 107 ntBASIC1.03□□□□□ -2.24
GTF3C3Q9Y5Q9 SNORA8.2-201ENST00000384372 139 ntBASIC1.03□□□□□ -2.24
GTF3C3Q9Y5Q9 MIR548L-201ENST00000408303 86 ntBASIC1.03□□□□□ -2.24
GTF3C3Q9Y5Q9 AL031737.1-201ENST00000450125 223 ntBASIC1.03□□□□□ -2.24
GTF3C3Q9Y5Q9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.03□□□□□ -2.24
GTF3C3Q9Y5Q9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.03□□□□□ -2.24
GTF3C3Q9Y5Q9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU6-554P-201ENST00000410466 106 ntBASIC1.02□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU6-237P-201ENST00000515985 71 ntBASIC1.02□□□□□ -2.25
GTF3C3Q9Y5Q9 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU6-813P-201ENST00000384691 107 ntBASIC1.01□□□□□ -2.25
GTF3C3Q9Y5Q9 Y_RNA.818-201ENST00000618813 71 ntBASIC1.01□□□□□ -2.25
GTF3C3Q9Y5Q9 SNORD36A-201ENST00000362874 73 ntBASIC1□□□□□ -2.25
GTF3C3Q9Y5Q9 RNA5SP403-201ENST00000363598 108 ntBASIC1□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU6-524P-201ENST00000384270 107 ntBASIC1□□□□□ -2.25
GTF3C3Q9Y5Q9 uc_338.28-201ENST00000612082 187 ntBASIC1□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU6-766P-201ENST00000362478 107 ntBASIC0.99□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU6-1244P-201ENST00000363614 108 ntBASIC0.99□□□□□ -2.25
GTF3C3Q9Y5Q9 MIR181B2-201ENST00000385004 89 ntBASIC0.99□□□□□ -2.25
GTF3C3Q9Y5Q9 SNORA36.1-201ENST00000363424 132 ntBASIC0.98□□□□□ -2.25
GTF3C3Q9Y5Q9 MIR518A1-201ENST00000385068 85 ntBASIC0.98□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU7-161P-201ENST00000517289 62 ntBASIC0.98□□□□□ -2.25
GTF3C3Q9Y5Q9 MIR4498-201ENST00000577599 66 ntBASIC0.98□□□□□ -2.25
GTF3C3Q9Y5Q9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.98□□□□□ -2.25
GTF3C3Q9Y5Q9 SNORD118-201ENST00000363593 134 ntBASIC0.97□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU6-755P-201ENST00000364400 103 ntBASIC0.97□□□□□ -2.25
GTF3C3Q9Y5Q9 Y_RNA.544-201ENST00000384650 113 ntBASIC0.97□□□□□ -2.25
GTF3C3Q9Y5Q9 MIR520E-201ENST00000384867 87 ntBASIC0.97□□□□□ -2.25
GTF3C3Q9Y5Q9 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
GTF3C3Q9Y5Q9 AL035461.1-201ENST00000421490 332 ntBASIC0.97□□□□□ -2.25
GTF3C3Q9Y5Q9 AL603825.1-201ENST00000438481 80 ntBASIC0.97□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU7-104P-201ENST00000459398 79 ntBASIC0.97□□□□□ -2.25
GTF3C3Q9Y5Q9 RNU6-392P-201ENST00000364926 101 ntBASIC0.96□□□□□ -2.26
GTF3C3Q9Y5Q9 MIR590-201ENST00000385008 97 ntBASIC0.95□□□□□ -2.26
GTF3C3Q9Y5Q9 TRMT112P2-201ENST00000512910 132 ntBASIC0.95□□□□□ -2.26
GTF3C3Q9Y5Q9 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
GTF3C3Q9Y5Q9 Y_RNA.338-201ENST00000365320 114 ntBASIC0.94□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU6-863P-201ENST00000515989 104 ntBASIC0.94□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU7-13P-201ENST00000516413 62 ntBASIC0.94□□□□□ -2.26
GTF3C3Q9Y5Q9 Y_RNA.705-201ENST00000516862 110 ntBASIC0.94□□□□□ -2.26
GTF3C3Q9Y5Q9 Y_RNA.93-201ENST00000363066 109 ntBASIC0.93□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU6-972P-201ENST00000391208 107 ntBASIC0.93□□□□□ -2.26
GTF3C3Q9Y5Q9 SNORA19.1-201ENST00000410656 129 ntBASIC0.93□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU7-74P-201ENST00000459104 62 ntBASIC0.93□□□□□ -2.26
GTF3C3Q9Y5Q9 Y_RNA.4-201ENST00000362333 112 ntBASIC0.92□□□□□ -2.26
GTF3C3Q9Y5Q9 SNORD115-44-201ENST00000365391 82 ntBASIC0.92□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU6-321P-201ENST00000410912 106 ntBASIC0.92□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU6-795P-201ENST00000516323 103 ntBASIC0.92□□□□□ -2.26
GTF3C3Q9Y5Q9 AC012531.4-201ENST00000616509 177 ntBASIC0.92□□□□□ -2.26
GTF3C3Q9Y5Q9 SNORD114-27-201ENST00000363766 70 ntBASIC0.91□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU6-726P-201ENST00000364680 107 ntBASIC0.91□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU6-644P-201ENST00000391155 98 ntBASIC0.91□□□□□ -2.26
GTF3C3Q9Y5Q9 RNU6-466P-201ENST00000391224 103 ntBASIC0.91□□□□□ -2.26
GTF3C3Q9Y5Q9 AC098934.3-201ENST00000430450 190 ntBASIC0.91□□□□□ -2.26
GTF3C3Q9Y5Q9 MIR3124-201ENST00000582636 67 ntBASIC0.91□□□□□ -2.26
GTF3C3Q9Y5Q9 MIR4777-201ENST00000583710 86 ntBASIC0.91□□□□□ -2.26
GTF3C3Q9Y5Q9 MIR6866-201ENST00000638146 69 ntBASIC0.91□□□□□ -2.26
GTF3C3Q9Y5Q9 Y_RNA.107-201ENST00000363190 121 ntBASIC0.9□□□□□ -2.27
GTF3C3Q9Y5Q9 RNU6-716P-201ENST00000365621 103 ntBASIC0.9□□□□□ -2.27
GTF3C3Q9Y5Q9 RNU2-59P-201ENST00000410482 191 ntBASIC0.9□□□□□ -2.27
GTF3C3Q9Y5Q9 SNORA25.18-201ENST00000607153 114 ntBASIC0.9□□□□□ -2.27
GTF3C3Q9Y5Q9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms