Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MIR548L-201ENST00000408303 86 ntBASIC0.48□□□□□ -2.33
COL4A3BPQ9Y5P4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.47□□□□□ -2.33
COL4A3BPQ9Y5P4 SNORD44.1-201ENST00000363202 61 ntBASIC0.47□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU6-816P-201ENST00000390914 107 ntBASIC0.47□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU6-1268P-201ENST00000391214 107 ntBASIC0.47□□□□□ -2.33
COL4A3BPQ9Y5P4 RNU6-1239P-201ENST00000391310 107 ntBASIC0.47□□□□□ -2.33
COL4A3BPQ9Y5P4 MIR4679-2-201ENST00000578358 77 ntBASIC0.47□□□□□ -2.33
COL4A3BPQ9Y5P4 AL162726.3-218ENST00000636401 95 ntBASIC0.47□□□□□ -2.33
COL4A3BPQ9Y5P4 Y_RNA.71-201ENST00000362892 104 ntBASIC0.46□□□□□ -2.34
COL4A3BPQ9Y5P4 SNORD114-23-201ENST00000363536 72 ntBASIC0.46□□□□□ -2.34
COL4A3BPQ9Y5P4 SNORD114-26-201ENST00000363543 72 ntBASIC0.46□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
COL4A3BPQ9Y5P4 RNY1P4-201ENST00000384595 115 ntBASIC0.46□□□□□ -2.34
COL4A3BPQ9Y5P4 SNORD63B-201ENST00000411005 70 ntBASIC0.46□□□□□ -2.34
COL4A3BPQ9Y5P4 Y_RNA.649-201ENST00000459077 103 ntBASIC0.46□□□□□ -2.34
COL4A3BPQ9Y5P4 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
COL4A3BPQ9Y5P4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 SNORD38.1-201ENST00000363863 68 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 Y_RNA.309-201ENST00000365046 111 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 SNORD116-14-201ENST00000383894 92 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 SNORD116-17-201ENST00000383929 92 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-187P-201ENST00000384139 106 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 SNORD116-15-201ENST00000384445 92 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 SNORD116-19-201ENST00000384729 92 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-659P-201ENST00000516454 104 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-850P-201ENST00000516934 103 ntBASIC0.45□□□□□ -2.34
COL4A3BPQ9Y5P4 Y_RNA.218-201ENST00000364218 104 ntBASIC0.44□□□□□ -2.34
COL4A3BPQ9Y5P4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.44□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.44□□□□□ -2.34
COL4A3BPQ9Y5P4 TMSB4XP3-201ENST00000445144 114 ntBASIC0.44□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU7-104P-201ENST00000459398 79 ntBASIC0.44□□□□□ -2.34
COL4A3BPQ9Y5P4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.44□□□□□ -2.34
COL4A3BPQ9Y5P4 AC067863.3-201ENST00000624172 122 ntBASIC0.44□□□□□ -2.34
COL4A3BPQ9Y5P4 Y_RNA.466-201ENST00000384294 113 ntBASIC0.43□□□□□ -2.34
COL4A3BPQ9Y5P4 RNA5SP134-201ENST00000516492 96 ntBASIC0.43□□□□□ -2.34
COL4A3BPQ9Y5P4 AC007012.1-201ENST00000567192 175 ntBASIC0.43□□□□□ -2.34
COL4A3BPQ9Y5P4 RNA5SP403-201ENST00000363598 108 ntBASIC0.42□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-716P-201ENST00000365621 103 ntBASIC0.42□□□□□ -2.34
COL4A3BPQ9Y5P4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
COL4A3BPQ9Y5P4 MIR548A3-201ENST00000385297 97 ntBASIC0.42□□□□□ -2.34
COL4A3BPQ9Y5P4 SPINT5P-201ENST00000448174 155 ntBASIC0.42□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU7-161P-201ENST00000517289 62 ntBASIC0.42□□□□□ -2.34
COL4A3BPQ9Y5P4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.42□□□□□ -2.34
COL4A3BPQ9Y5P4 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-848P-201ENST00000515948 107 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-617P-201ENST00000516147 107 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-473P-201ENST00000516164 107 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 RNU6-90P-201ENST00000606352 106 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 AC010487.4-201ENST00000637027 61 ntBASIC0.41□□□□□ -2.34
COL4A3BPQ9Y5P4 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
COL4A3BPQ9Y5P4 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
COL4A3BPQ9Y5P4 Y_RNA.525-201ENST00000384570 113 ntBASIC0.4□□□□□ -2.35
COL4A3BPQ9Y5P4 MIR548G-201ENST00000408442 89 ntBASIC0.4□□□□□ -2.35
COL4A3BPQ9Y5P4 RNU7-195P-201ENST00000458793 62 ntBASIC0.4□□□□□ -2.35
COL4A3BPQ9Y5P4 RNU6-1006P-201ENST00000516998 103 ntBASIC0.4□□□□□ -2.35
COL4A3BPQ9Y5P4 AC096720.1-201ENST00000604441 183 ntBASIC0.4□□□□□ -2.35
COL4A3BPQ9Y5P4 AL670379.3-201ENST00000605040 251 ntBASIC0.4□□□□□ -2.35
COL4A3BPQ9Y5P4 RNU6-726P-201ENST00000364680 107 ntBASIC0.39□□□□□ -2.35
COL4A3BPQ9Y5P4 AC069271.1-201ENST00000445577 156 ntBASIC0.39□□□□□ -2.35
COL4A3BPQ9Y5P4 SNORD33.1-201ENST00000516213 88 ntBASIC0.39□□□□□ -2.35
COL4A3BPQ9Y5P4 AL442128.1-201ENST00000615151 90 ntBASIC0.39□□□□□ -2.35
COL4A3BPQ9Y5P4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.39□□□□□ -2.35
COL4A3BPQ9Y5P4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
COL4A3BPQ9Y5P4 Y_RNA.35-201ENST00000362601 101 ntBASIC0.38□□□□□ -2.35
COL4A3BPQ9Y5P4 RNU6-1201P-201ENST00000384227 107 ntBASIC0.38□□□□□ -2.35
COL4A3BPQ9Y5P4 AC073261.1-201ENST00000429409 121 ntBASIC0.38□□□□□ -2.35
COL4A3BPQ9Y5P4 RNU6-959P-201ENST00000384671 107 ntBASIC0.37□□□□□ -2.35
COL4A3BPQ9Y5P4 MIR193B-201ENST00000384907 83 ntBASIC0.37□□□□□ -2.35
COL4A3BPQ9Y5P4 AL353813.1-201ENST00000440700 253 ntBASIC0.37□□□□□ -2.35
COL4A3BPQ9Y5P4 AC008267.6-201ENST00000441664 139 ntBASIC0.37□□□□□ -2.35
COL4A3BPQ9Y5P4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
COL4A3BPQ9Y5P4 Y_RNA.377-201ENST00000365644 108 ntBASIC0.36□□□□□ -2.35
COL4A3BPQ9Y5P4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.36□□□□□ -2.35
COL4A3BPQ9Y5P4 AC108740.1-201ENST00000498629 225 ntBASIC0.36□□□□□ -2.35
COL4A3BPQ9Y5P4 RNU6-1333P-201ENST00000516162 93 ntBASIC0.36□□□□□ -2.35
COL4A3BPQ9Y5P4 AL035470.1-201ENST00000622571 220 ntBASIC0.36□□□□□ -2.35
COL4A3BPQ9Y5P4 MIR7-2-201ENST00000384970 110 ntBASIC0.35□□□□□ -2.35
COL4A3BPQ9Y5P4 SNORD41.1-201ENST00000391000 69 ntBASIC0.35□□□□□ -2.35
COL4A3BPQ9Y5P4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.35□□□□□ -2.35
COL4A3BPQ9Y5P4 MIR6779-201ENST00000617283 64 ntBASIC0.35□□□□□ -2.35
COL4A3BPQ9Y5P4 Y_RNA.57-201ENST00000362806 113 ntBASIC0.34□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-81P-201ENST00000365608 104 ntBASIC0.34□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU6-524P-201ENST00000384270 107 ntBASIC0.34□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR548A1-201ENST00000385041 97 ntBASIC0.34□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU7-13P-201ENST00000516413 62 ntBASIC0.34□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR4694-201ENST00000578534 80 ntBASIC0.34□□□□□ -2.36
COL4A3BPQ9Y5P4 AL162376.1-201ENST00000624117 175 ntBASIC0.34□□□□□ -2.36
COL4A3BPQ9Y5P4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR516A2-201ENST00000384888 90 ntBASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 MIR516A1-201ENST00000385033 90 ntBASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU7-74P-201ENST00000459104 62 ntBASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 RNU7-106P-201ENST00000459514 67 ntBASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 AC068339.1-201ENST00000526965 141 ntBASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 AC073869.9-201ENST00000641610 120 ntBASIC0.33□□□□□ -2.36
COL4A3BPQ9Y5P4 SNORA9.1-201ENST00000362412 131 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms