Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
PCDHA9Q9Y5H5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
PCDHA9Q9Y5H5 SNORD116-10-201ENST00000363791 102 ntBASIC1.1□□□□□ -2.23
PCDHA9Q9Y5H5 RNU7-106P-201ENST00000459514 67 ntBASIC1.1□□□□□ -2.23
PCDHA9Q9Y5H5 RNU6-237P-201ENST00000515985 71 ntBASIC1.1□□□□□ -2.23
PCDHA9Q9Y5H5 U7.3-201ENST00000616123 62 ntBASIC1.1□□□□□ -2.23
PCDHA9Q9Y5H5 MALAT1.1-201ENST00000618249 95 ntBASIC1.1□□□□□ -2.23
PCDHA9Q9Y5H5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
PCDHA9Q9Y5H5 SNORD36A-201ENST00000362874 73 ntBASIC1.09□□□□□ -2.23
PCDHA9Q9Y5H5 RNU6-243P-201ENST00000391140 107 ntBASIC1.09□□□□□ -2.23
PCDHA9Q9Y5H5 SNORD99-201ENST00000408612 74 ntBASIC1.09□□□□□ -2.23
PCDHA9Q9Y5H5 AC097635.1-201ENST00000450678 155 ntBASIC1.09□□□□□ -2.23
PCDHA9Q9Y5H5 AC244505.6-201ENST00000452829 130 ntBASIC1.09□□□□□ -2.23
PCDHA9Q9Y5H5 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
PCDHA9Q9Y5H5 AL513043.2-201ENST00000573941 143 ntBASIC1.09□□□□□ -2.23
PCDHA9Q9Y5H5 RNU6-1298P-201ENST00000362456 101 ntBASIC1.08□□□□□ -2.24
PCDHA9Q9Y5H5 RNU6-1260P-201ENST00000362944 107 ntBASIC1.08□□□□□ -2.24
PCDHA9Q9Y5H5 RNA5SP245-201ENST00000364239 121 ntBASIC1.08□□□□□ -2.24
PCDHA9Q9Y5H5 Y_RNA.290-201ENST00000364879 114 ntBASIC1.08□□□□□ -2.24
PCDHA9Q9Y5H5 SNORA31.14-201ENST00000516728 116 ntBASIC1.08□□□□□ -2.24
PCDHA9Q9Y5H5 RNU6-135P-201ENST00000516769 101 ntBASIC1.08□□□□□ -2.24
PCDHA9Q9Y5H5 AC025521.1-201ENST00000621624 286 ntBASIC1.08□□□□□ -2.24
PCDHA9Q9Y5H5 Y_RNA.32-201ENST00000362589 110 ntBASIC1.07□□□□□ -2.24
PCDHA9Q9Y5H5 Y_RNA.220-201ENST00000364244 109 ntBASIC1.07□□□□□ -2.24
PCDHA9Q9Y5H5 RNU7-195P-201ENST00000458793 62 ntBASIC1.07□□□□□ -2.24
PCDHA9Q9Y5H5 Y_RNA.809-201ENST00000516058 95 ntBASIC1.07□□□□□ -2.24
PCDHA9Q9Y5H5 RNA5SP170-201ENST00000517150 101 ntBASIC1.07□□□□□ -2.24
PCDHA9Q9Y5H5 AL353765.1-201ENST00000605514 183 ntBASIC1.07□□□□□ -2.24
PCDHA9Q9Y5H5 snoU13.31-201ENST00000607291 104 ntBASIC1.07□□□□□ -2.24
PCDHA9Q9Y5H5 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
PCDHA9Q9Y5H5 MIR488-201ENST00000365739 83 ntBASIC1.06□□□□□ -2.24
PCDHA9Q9Y5H5 RNY4P30-201ENST00000410216 95 ntBASIC1.06□□□□□ -2.24
PCDHA9Q9Y5H5 AC244098.3-201ENST00000424803 96 ntBASIC1.06□□□□□ -2.24
PCDHA9Q9Y5H5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.06□□□□□ -2.24
PCDHA9Q9Y5H5 MIR3612-201ENST00000579753 87 ntBASIC1.06□□□□□ -2.24
PCDHA9Q9Y5H5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.06□□□□□ -2.24
PCDHA9Q9Y5H5 RNU4-45P-201ENST00000365469 141 ntBASIC1.05□□□□□ -2.24
PCDHA9Q9Y5H5 AC011195.1-201ENST00000578177 177 ntBASIC1.05□□□□□ -2.24
PCDHA9Q9Y5H5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
PCDHA9Q9Y5H5 MIR599-201ENST00000385069 95 ntBASIC1.04□□□□□ -2.24
PCDHA9Q9Y5H5 AL603825.1-201ENST00000438481 80 ntBASIC1.04□□□□□ -2.24
PCDHA9Q9Y5H5 Y_RNA.648-201ENST00000459455 110 ntBASIC1.04□□□□□ -2.24
PCDHA9Q9Y5H5 RNU6-162P-201ENST00000516228 103 ntBASIC1.04□□□□□ -2.24
PCDHA9Q9Y5H5 RNU6-469P-201ENST00000516253 101 ntBASIC1.04□□□□□ -2.24
PCDHA9Q9Y5H5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.04□□□□□ -2.24
PCDHA9Q9Y5H5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.04□□□□□ -2.24
PCDHA9Q9Y5H5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.03□□□□□ -2.24
PCDHA9Q9Y5H5 Y_RNA.369-201ENST00000365568 117 ntBASIC1.03□□□□□ -2.24
PCDHA9Q9Y5H5 MIR608-201ENST00000384820 100 ntBASIC1.03□□□□□ -2.24
PCDHA9Q9Y5H5 Y_RNA.190-201ENST00000363964 101 ntBASIC1.02□□□□□ -2.25
PCDHA9Q9Y5H5 MIR5582-201ENST00000579697 68 ntBASIC1.02□□□□□ -2.25
PCDHA9Q9Y5H5 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
PCDHA9Q9Y5H5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
PCDHA9Q9Y5H5 RNU6-1131P-201ENST00000364955 107 ntBASIC1.01□□□□□ -2.25
PCDHA9Q9Y5H5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
PCDHA9Q9Y5H5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
PCDHA9Q9Y5H5 MIR4498-201ENST00000577599 66 ntBASIC1.01□□□□□ -2.25
PCDHA9Q9Y5H5 MIR3124-201ENST00000582636 67 ntBASIC1.01□□□□□ -2.25
PCDHA9Q9Y5H5 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
PCDHA9Q9Y5H5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.01□□□□□ -2.25
PCDHA9Q9Y5H5 MIR18A-201ENST00000362310 71 ntBASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 RNA5SP432-201ENST00000362480 116 ntBASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 Y_RNA.43-201ENST00000362670 111 ntBASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 MIR644A-201ENST00000385262 94 ntBASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 MIR3678-201ENST00000578455 94 ntBASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 MIR4639-201ENST00000584938 69 ntBASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
PCDHA9Q9Y5H5 RNU6-466P-201ENST00000391224 103 ntBASIC0.99□□□□□ -2.25
PCDHA9Q9Y5H5 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
PCDHA9Q9Y5H5 RNU6-844P-201ENST00000517175 102 ntBASIC0.99□□□□□ -2.25
PCDHA9Q9Y5H5 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
PCDHA9Q9Y5H5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
PCDHA9Q9Y5H5 SNORD115-24-201ENST00000363528 82 ntBASIC0.98□□□□□ -2.25
PCDHA9Q9Y5H5 RNU6-49P-201ENST00000384256 107 ntBASIC0.98□□□□□ -2.25
PCDHA9Q9Y5H5 RNU6-524P-201ENST00000384270 107 ntBASIC0.98□□□□□ -2.25
PCDHA9Q9Y5H5 RNY1P7-201ENST00000384743 110 ntBASIC0.98□□□□□ -2.25
PCDHA9Q9Y5H5 RNU6-392P-201ENST00000364926 101 ntBASIC0.97□□□□□ -2.25
PCDHA9Q9Y5H5 RNU6-519P-201ENST00000410590 108 ntBASIC0.97□□□□□ -2.25
PCDHA9Q9Y5H5 snoU13.11-201ENST00000459219 104 ntBASIC0.97□□□□□ -2.25
PCDHA9Q9Y5H5 RNU6-1255P-201ENST00000363434 112 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 RNA5SP403-201ENST00000363598 108 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 SNORD18A-201ENST00000363753 72 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 Y_RNA.221-201ENST00000364248 96 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 Y_RNA.283-201ENST00000364798 112 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 Y_RNA.338-201ENST00000365320 114 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 SNORD28-201ENST00000384706 75 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 AL161932.1-201ENST00000437408 146 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 AC026421.1-201ENST00000519101 163 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
PCDHA9Q9Y5H5 RNU6-1229P-201ENST00000364295 107 ntBASIC0.95□□□□□ -2.26
PCDHA9Q9Y5H5 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
PCDHA9Q9Y5H5 RNU6-110P-201ENST00000384508 104 ntBASIC0.95□□□□□ -2.26
PCDHA9Q9Y5H5 RNA5SP222-201ENST00000411039 105 ntBASIC0.95□□□□□ -2.26
PCDHA9Q9Y5H5 SNORD4B-201ENST00000459083 72 ntBASIC0.95□□□□□ -2.26
PCDHA9Q9Y5H5 TRMT112P2-201ENST00000512910 132 ntBASIC0.95□□□□□ -2.26
PCDHA9Q9Y5H5 RNU6-1265P-201ENST00000516342 103 ntBASIC0.95□□□□□ -2.26
PCDHA9Q9Y5H5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms