Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 U7.7-201ENST00000459276 60 ntBASIC1.19□□□□□ -2.22
PCDHB1Q9Y5F3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.19□□□□□ -2.22
PCDHB1Q9Y5F3 AC026421.1-201ENST00000519101 163 ntBASIC1.19□□□□□ -2.22
PCDHB1Q9Y5F3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.19□□□□□ -2.22
PCDHB1Q9Y5F3 AC025521.1-201ENST00000621624 286 ntBASIC1.19□□□□□ -2.22
PCDHB1Q9Y5F3 HSBP1P2-201ENST00000299671 229 ntBASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 RNU6-1134P-201ENST00000365156 101 ntBASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 MIR181B2-201ENST00000385004 89 ntBASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 MIR100-201ENST00000385259 80 ntBASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 MIR942-201ENST00000401111 86 ntBASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 Y_RNA.593-201ENST00000410292 98 ntBASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 AC062037.1-201ENST00000605302 128 ntBASIC1.18□□□□□ -2.22
PCDHB1Q9Y5F3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.17□□□□□ -2.22
PCDHB1Q9Y5F3 RNU6-369P-201ENST00000362515 102 ntBASIC1.17□□□□□ -2.22
PCDHB1Q9Y5F3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PCDHB1Q9Y5F3 Y_RNA.388-201ENST00000383919 113 ntBASIC1.17□□□□□ -2.22
PCDHB1Q9Y5F3 MIR125B2-201ENST00000385128 89 ntBASIC1.17□□□□□ -2.22
PCDHB1Q9Y5F3 MIR1827-201ENST00000408549 66 ntBASIC1.17□□□□□ -2.22
PCDHB1Q9Y5F3 SNRPGP12-201ENST00000449481 213 ntBASIC1.17□□□□□ -2.22
PCDHB1Q9Y5F3 MIR151B-201ENST00000584249 96 ntBASIC1.17□□□□□ -2.22
PCDHB1Q9Y5F3 SNORD58A-201ENST00000383875 65 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 MIR548J-201ENST00000408833 112 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 RNU6-977P-201ENST00000516411 103 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 RNU6-267P-201ENST00000516714 103 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 RNU6-850P-201ENST00000516934 103 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 AL513043.2-201ENST00000573941 143 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 AC013244.2-201ENST00000603396 103 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 MIR6779-201ENST00000617283 64 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 MIR6788-201ENST00000618842 66 ntBASIC1.16□□□□□ -2.22
PCDHB1Q9Y5F3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
PCDHB1Q9Y5F3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 MIR494-201ENST00000349529 81 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 SNORD38.2-201ENST00000384470 69 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 Y_RNA.558-201ENST00000384685 113 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 RNU6-972P-201ENST00000391208 107 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 MIR938-201ENST00000401216 83 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 MIR4676-201ENST00000583078 72 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 MIR4439-201ENST00000583746 80 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 MIR8066-201ENST00000617280 78 ntBASIC1.15□□□□□ -2.23
PCDHB1Q9Y5F3 SNORD114-26-201ENST00000363543 72 ntBASIC1.14□□□□□ -2.23
PCDHB1Q9Y5F3 RNY4P29-201ENST00000410801 97 ntBASIC1.14□□□□□ -2.23
PCDHB1Q9Y5F3 AC025627.3-201ENST00000582078 182 ntBASIC1.14□□□□□ -2.23
PCDHB1Q9Y5F3 Y_RNA.73-201ENST00000362910 113 ntBASIC1.13□□□□□ -2.23
PCDHB1Q9Y5F3 SNORD89-201ENST00000390981 114 ntBASIC1.13□□□□□ -2.23
PCDHB1Q9Y5F3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.13□□□□□ -2.23
PCDHB1Q9Y5F3 RNU6-402P-201ENST00000410678 103 ntBASIC1.13□□□□□ -2.23
PCDHB1Q9Y5F3 AC008608.1-201ENST00000603910 127 ntBASIC1.13□□□□□ -2.23
PCDHB1Q9Y5F3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 RNA5SP325-201ENST00000363756 130 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 RNU6-364P-201ENST00000384387 107 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 MIR516A2-201ENST00000384888 90 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 MIR516A1-201ENST00000385033 90 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 RNU6-592P-201ENST00000411333 103 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 RNU7-106P-201ENST00000459514 67 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 RNU7-156P-201ENST00000517214 74 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 MIR4804-201ENST00000581683 73 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.12□□□□□ -2.23
PCDHB1Q9Y5F3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.11□□□□□ -2.23
PCDHB1Q9Y5F3 RNY1P4-201ENST00000384595 115 ntBASIC1.11□□□□□ -2.23
PCDHB1Q9Y5F3 MIR598-201ENST00000384868 97 ntBASIC1.11□□□□□ -2.23
PCDHB1Q9Y5F3 SNORD100-201ENST00000408573 76 ntBASIC1.11□□□□□ -2.23
PCDHB1Q9Y5F3 Y_RNA.609-201ENST00000410669 89 ntBASIC1.11□□□□□ -2.23
PCDHB1Q9Y5F3 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
PCDHB1Q9Y5F3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.11□□□□□ -2.23
PCDHB1Q9Y5F3 RNU4-58P-201ENST00000363192 141 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 SNORD116-10-201ENST00000363791 102 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 RNU6-219P-201ENST00000364728 107 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 RNU6-571P-201ENST00000384128 107 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 MIR520F-201ENST00000384824 87 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 SNORA26.2-201ENST00000390922 122 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 RNU7-56P-201ENST00000458744 62 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 RNA5SP436-201ENST00000516020 115 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
PCDHB1Q9Y5F3 RNU1-119P-201ENST00000391122 165 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 RNU7-102P-201ENST00000458948 62 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 TRAJ51-201ENST00000504127 63 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 RN7SKP12-201ENST00000516275 143 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 RNA5SP255-201ENST00000516370 107 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 MIR4668-201ENST00000582284 70 ntBASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
PCDHB1Q9Y5F3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 RNA5SP245-201ENST00000364239 121 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 SNORD115-27-201ENST00000364430 82 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 RNA5SP173-201ENST00000364857 136 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 SNORD63B-201ENST00000411005 70 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms