Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SNORD12-201ENST00000391002 90 ntBASIC1.62□□□□□ -2.15
PCDHA4Q9UN74 MIR3124-201ENST00000582636 67 ntBASIC1.62□□□□□ -2.15
PCDHA4Q9UN74 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PCDHA4Q9UN74 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
PCDHA4Q9UN74 Y_RNA.283-201ENST00000364798 112 ntBASIC1.61□□□□□ -2.15
PCDHA4Q9UN74 RNU6-994P-201ENST00000410507 111 ntBASIC1.61□□□□□ -2.15
PCDHA4Q9UN74 AC092628.1-201ENST00000436250 252 ntBASIC1.61□□□□□ -2.15
PCDHA4Q9UN74 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDHA4Q9UN74 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
PCDHA4Q9UN74 SNORD115-37-201ENST00000363768 82 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 MIR938-201ENST00000401216 83 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 RNU7-195P-201ENST00000458793 62 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 RNU6-75P-201ENST00000515944 104 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 RNU7-153P-201ENST00000516455 62 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 Y_RNA.697-201ENST00000516776 113 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 RNU6-448P-201ENST00000517052 107 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 MIR4536-1-201ENST00000583537 88 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 MIR4769-201ENST00000584126 77 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 AC027335.2-201ENST00000624030 375 ntBASIC1.6□□□□□ -2.15
PCDHA4Q9UN74 ZNF209P-201ENST00000593450 2304 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 RNU6-652P-201ENST00000365488 107 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 RNU6-364P-201ENST00000384387 107 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 RNU6-466P-201ENST00000391224 103 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 RNU6-279P-201ENST00000391297 101 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 RNU6-65P-201ENST00000516332 98 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 AC140658.3-201ENST00000567603 271 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 MIR4804-201ENST00000581683 73 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
PCDHA4Q9UN74 Y_RNA.316-201ENST00000365118 111 ntBASIC1.58□□□□□ -2.16
PCDHA4Q9UN74 RNU7-102P-201ENST00000458948 62 ntBASIC1.58□□□□□ -2.16
PCDHA4Q9UN74 Y_RNA.809-201ENST00000516058 95 ntBASIC1.58□□□□□ -2.16
PCDHA4Q9UN74 MIR4781-201ENST00000585250 76 ntBASIC1.58□□□□□ -2.16
PCDHA4Q9UN74 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCDHA4Q9UN74 RNU6-1260P-201ENST00000362944 107 ntBASIC1.57□□□□□ -2.16
PCDHA4Q9UN74 RNU6-957P-201ENST00000363652 99 ntBASIC1.57□□□□□ -2.16
PCDHA4Q9UN74 Y_RNA.508-201ENST00000384502 114 ntBASIC1.57□□□□□ -2.16
PCDHA4Q9UN74 RNU7-56P-201ENST00000458744 62 ntBASIC1.57□□□□□ -2.16
PCDHA4Q9UN74 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
PCDHA4Q9UN74 RNU6-977P-201ENST00000516411 103 ntBASIC1.57□□□□□ -2.16
PCDHA4Q9UN74 MIR1-1-201ENST00000362147 71 ntBASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 RNU6-811P-201ENST00000384069 107 ntBASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 MIR100-201ENST00000385259 80 ntBASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 AC002429.1-201ENST00000437672 148 ntBASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 SNORA25.13-201ENST00000516395 103 ntBASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.56□□□□□ -2.16
PCDHA4Q9UN74 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 RNU6-291P-201ENST00000384720 107 ntBASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 AC097635.1-201ENST00000450678 155 ntBASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 AC138907.6-201ENST00000568401 126 ntBASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 AC138869.1-201ENST00000568623 124 ntBASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDHA4Q9UN74 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 RNA5SP327-201ENST00000362494 101 ntBASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 SNORA25-201ENST00000384384 134 ntBASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 RNU6-535P-201ENST00000384722 107 ntBASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 MIR222-201ENST00000384992 110 ntBASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 MIR1827-201ENST00000408549 66 ntBASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 AP1B1P2-201ENST00000416196 106 ntBASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 AC008608.1-201ENST00000603910 127 ntBASIC1.54□□□□□ -2.16
PCDHA4Q9UN74 RNU6-132P-201ENST00000383863 107 ntBASIC1.53□□□□□ -2.16
PCDHA4Q9UN74 RNA5SP292-201ENST00000390974 118 ntBASIC1.53□□□□□ -2.16
PCDHA4Q9UN74 RNU1-119P-201ENST00000391122 165 ntBASIC1.53□□□□□ -2.16
PCDHA4Q9UN74 AC067940.1-201ENST00000458411 300 ntBASIC1.53□□□□□ -2.16
PCDHA4Q9UN74 RNU1-123P-201ENST00000458950 160 ntBASIC1.53□□□□□ -2.16
PCDHA4Q9UN74 RNU6-857P-201ENST00000515893 110 ntBASIC1.53□□□□□ -2.16
PCDHA4Q9UN74 MIR4796-201ENST00000580742 81 ntBASIC1.53□□□□□ -2.16
PCDHA4Q9UN74 MIR3064-201ENST00000581130 66 ntBASIC1.53□□□□□ -2.16
PCDHA4Q9UN74 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
PCDHA4Q9UN74 RNA5SP245-201ENST00000364239 121 ntBASIC1.52□□□□□ -2.17
PCDHA4Q9UN74 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
PCDHA4Q9UN74 RNU6-237P-201ENST00000515985 71 ntBASIC1.52□□□□□ -2.17
PCDHA4Q9UN74 AC104996.3-201ENST00000590718 94 ntBASIC1.52□□□□□ -2.17
PCDHA4Q9UN74 AL359821.1-201ENST00000605519 182 ntBASIC1.52□□□□□ -2.17
PCDHA4Q9UN74 TRDV1-202ENST00000621643 102 ntBASIC1.52□□□□□ -2.17
PCDHA4Q9UN74 MIR378A-201ENST00000362177 66 ntBASIC1.51□□□□□ -2.17
PCDHA4Q9UN74 MIR520F-201ENST00000384824 87 ntBASIC1.51□□□□□ -2.17
PCDHA4Q9UN74 MIR599-201ENST00000385069 95 ntBASIC1.51□□□□□ -2.17
PCDHA4Q9UN74 MIR548U-201ENST00000390728 81 ntBASIC1.51□□□□□ -2.17
PCDHA4Q9UN74 AL606490.4-201ENST00000423117 127 ntBASIC1.51□□□□□ -2.17
PCDHA4Q9UN74 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
PCDHA4Q9UN74 SNORA18.5-201ENST00000516616 101 ntBASIC1.51□□□□□ -2.17
PCDHA4Q9UN74 Y_RNA.94-201ENST00000363068 106 ntBASIC1.5□□□□□ -2.17
PCDHA4Q9UN74 RNU6-624P-201ENST00000363411 107 ntBASIC1.5□□□□□ -2.17
PCDHA4Q9UN74 RNU6-24P-201ENST00000384440 107 ntBASIC1.5□□□□□ -2.17
PCDHA4Q9UN74 MIR518E-201ENST00000385252 88 ntBASIC1.5□□□□□ -2.17
PCDHA4Q9UN74 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
PCDHA4Q9UN74 AC068338.1-201ENST00000565567 176 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms