Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 RNU6-106P-201ENST00000384405 107 ntBASIC0.83□□□□□ -2.28
VPS4AQ9UN37 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
VPS4AQ9UN37 AC138907.6-201ENST00000568401 126 ntBASIC0.83□□□□□ -2.28
VPS4AQ9UN37 MIR4500-201ENST00000579472 76 ntBASIC0.83□□□□□ -2.28
VPS4AQ9UN37 MIR4714-201ENST00000580728 77 ntBASIC0.83□□□□□ -2.28
VPS4AQ9UN37 MIR6513-201ENST00000621188 64 ntBASIC0.83□□□□□ -2.28
VPS4AQ9UN37 MIR924-201ENST00000638017 53 ntBASIC0.83□□□□□ -2.28
VPS4AQ9UN37 RNU6-832P-201ENST00000363319 107 ntBASIC0.82□□□□□ -2.28
VPS4AQ9UN37 RNU6-571P-201ENST00000384128 107 ntBASIC0.82□□□□□ -2.28
VPS4AQ9UN37 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
VPS4AQ9UN37 DEFB131E-201ENST00000532329 154 ntBASIC0.82□□□□□ -2.28
VPS4AQ9UN37 MIR3613-201ENST00000579844 87 ntBASIC0.82□□□□□ -2.28
VPS4AQ9UN37 Y_RNA.115-201ENST00000363272 98 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 Y_RNA.173-201ENST00000363776 113 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 SNORD38.2-201ENST00000384470 69 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 RNU6-919P-201ENST00000516731 104 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 Y_RNA.697-201ENST00000516776 113 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.81□□□□□ -2.28
VPS4AQ9UN37 AC011195.1-201ENST00000578177 177 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 MIR3612-201ENST00000579753 87 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 AC010487.4-201ENST00000637027 61 ntBASIC0.81□□□□□ -2.28
VPS4AQ9UN37 Y_RNA.163-201ENST00000363702 113 ntBASIC0.8□□□□□ -2.28
VPS4AQ9UN37 Y_RNA.174-201ENST00000363781 105 ntBASIC0.8□□□□□ -2.28
VPS4AQ9UN37 MIR519A1-201ENST00000385257 85 ntBASIC0.8□□□□□ -2.28
VPS4AQ9UN37 MIR548G-201ENST00000408442 89 ntBASIC0.8□□□□□ -2.28
VPS4AQ9UN37 AC004941.2-201ENST00000427009 228 ntBASIC0.8□□□□□ -2.28
VPS4AQ9UN37 RNU6-537P-201ENST00000517277 103 ntBASIC0.8□□□□□ -2.28
VPS4AQ9UN37 MIR18A-201ENST00000362310 71 ntBASIC0.79□□□□□ -2.28
VPS4AQ9UN37 RNU4-45P-201ENST00000365469 141 ntBASIC0.79□□□□□ -2.28
VPS4AQ9UN37 RNU6-535P-201ENST00000384722 107 ntBASIC0.79□□□□□ -2.28
VPS4AQ9UN37 BX276092.1-201ENST00000427368 251 ntBASIC0.79□□□□□ -2.28
VPS4AQ9UN37 SNORA31.14-201ENST00000516728 116 ntBASIC0.79□□□□□ -2.28
VPS4AQ9UN37 MIR548H5-201ENST00000580314 60 ntBASIC0.79□□□□□ -2.28
VPS4AQ9UN37 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS4AQ9UN37 MIR101-2-201ENST00000362195 79 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 Y_RNA.32-201ENST00000362589 110 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 Y_RNA.68-201ENST00000362881 102 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 RNA5SP245-201ENST00000364239 121 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 RNU6-554P-201ENST00000410466 106 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 AC244505.6-201ENST00000452829 130 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 RNU6-904P-201ENST00000516206 101 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 AC141557.1-201ENST00000540982 400 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 RNU6-90P-201ENST00000606352 106 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 RNU7-10P-201ENST00000607194 63 ntBASIC0.78□□□□□ -2.28
VPS4AQ9UN37 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VPS4AQ9UN37 RNA5SP117-201ENST00000365294 118 ntBASIC0.77□□□□□ -2.29
VPS4AQ9UN37 MIR936-201ENST00000401264 98 ntBASIC0.77□□□□□ -2.29
VPS4AQ9UN37 Y_RNA.601-201ENST00000410500 113 ntBASIC0.77□□□□□ -2.29
VPS4AQ9UN37 TRAJ51-201ENST00000504127 63 ntBASIC0.77□□□□□ -2.29
VPS4AQ9UN37 RNU6-850P-201ENST00000516934 103 ntBASIC0.77□□□□□ -2.29
VPS4AQ9UN37 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
VPS4AQ9UN37 RNU6-170P-201ENST00000362832 104 ntBASIC0.76□□□□□ -2.29
VPS4AQ9UN37 RNU6-1163P-201ENST00000364516 107 ntBASIC0.76□□□□□ -2.29
VPS4AQ9UN37 MIR1302-5-201ENST00000408164 150 ntBASIC0.76□□□□□ -2.29
VPS4AQ9UN37 AL035461.1-201ENST00000421490 332 ntBASIC0.76□□□□□ -2.29
VPS4AQ9UN37 AC092628.1-201ENST00000436250 252 ntBASIC0.76□□□□□ -2.29
VPS4AQ9UN37 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.76□□□□□ -2.29
VPS4AQ9UN37 MIR4439-201ENST00000583746 80 ntBASIC0.76□□□□□ -2.29
VPS4AQ9UN37 AC096720.1-201ENST00000604441 183 ntBASIC0.76□□□□□ -2.29
VPS4AQ9UN37 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
VPS4AQ9UN37 Y_RNA.10-201ENST00000362371 110 ntBASIC0.75□□□□□ -2.29
VPS4AQ9UN37 Y_RNA.342-201ENST00000365352 113 ntBASIC0.75□□□□□ -2.29
VPS4AQ9UN37 MIR635-201ENST00000384830 98 ntBASIC0.75□□□□□ -2.29
VPS4AQ9UN37 Y_RNA.681-201ENST00000516445 113 ntBASIC0.75□□□□□ -2.29
VPS4AQ9UN37 AC138869.1-201ENST00000568623 124 ntBASIC0.75□□□□□ -2.29
VPS4AQ9UN37 MIR3678-201ENST00000578455 94 ntBASIC0.75□□□□□ -2.29
VPS4AQ9UN37 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS4AQ9UN37 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
VPS4AQ9UN37 RNU4-36P-201ENST00000364294 144 ntBASIC0.74□□□□□ -2.29
VPS4AQ9UN37 RNU6-135P-201ENST00000516769 101 ntBASIC0.74□□□□□ -2.29
VPS4AQ9UN37 RNA5SP330-201ENST00000517096 96 ntBASIC0.74□□□□□ -2.29
VPS4AQ9UN37 MTND5P40-201ENST00000559945 246 ntBASIC0.74□□□□□ -2.29
VPS4AQ9UN37 uc_338.28-201ENST00000612082 187 ntBASIC0.74□□□□□ -2.29
VPS4AQ9UN37 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS4AQ9UN37 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
VPS4AQ9UN37 SNORA19.1-201ENST00000410656 129 ntBASIC0.73□□□□□ -2.29
VPS4AQ9UN37 SNORD63B-201ENST00000411005 70 ntBASIC0.73□□□□□ -2.29
VPS4AQ9UN37 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
VPS4AQ9UN37 SPINT5P-201ENST00000448174 155 ntBASIC0.73□□□□□ -2.29
VPS4AQ9UN37 RNU7-106P-201ENST00000459514 67 ntBASIC0.73□□□□□ -2.29
VPS4AQ9UN37 RNU6-766P-201ENST00000362478 107 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 Y_RNA.95-201ENST00000363079 95 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 SNORD18A-201ENST00000363753 72 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 RNU6-1113P-201ENST00000384348 107 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 Y_RNA.567-201ENST00000384736 106 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 MIR644A-201ENST00000385262 94 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 AC097635.1-201ENST00000450678 155 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 MIR8087-201ENST00000612745 78 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 AL109933.3-201ENST00000619095 188 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 AC091304.10-201ENST00000641554 121 ntBASIC0.72□□□□□ -2.29
VPS4AQ9UN37 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
VPS4AQ9UN37 RNU6-1260P-201ENST00000362944 107 ntBASIC0.71□□□□□ -2.3
VPS4AQ9UN37 RNU6-1244P-201ENST00000363614 108 ntBASIC0.71□□□□□ -2.3
VPS4AQ9UN37 SNORD45B-201ENST00000364617 72 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms