Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MIR3613-201ENST00000579844 87 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 uc_338.28-201ENST00000612082 187 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 Y_RNA.56-201ENST00000362798 112 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 Y_RNA.163-201ENST00000363702 113 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 MIR548G-201ENST00000408442 89 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 RNU6-554P-201ENST00000410466 106 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 SPINT5P-201ENST00000448174 155 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 RNU6-850P-201ENST00000516934 103 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 AC141557.1-201ENST00000540982 400 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 MTND5P40-201ENST00000559945 246 ntBASIC0.66□□□□□ -2.3
SIX4Q9UIU6 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
SIX4Q9UIU6 SNORA36.2-201ENST00000384004 127 ntBASIC0.65□□□□□ -2.31
SIX4Q9UIU6 RNU6-106P-201ENST00000384405 107 ntBASIC0.65□□□□□ -2.31
SIX4Q9UIU6 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
SIX4Q9UIU6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.65□□□□□ -2.31
SIX4Q9UIU6 AC092628.1-201ENST00000436250 252 ntBASIC0.65□□□□□ -2.31
SIX4Q9UIU6 TRAJ51-201ENST00000504127 63 ntBASIC0.65□□□□□ -2.31
SIX4Q9UIU6 MIR548H5-201ENST00000580314 60 ntBASIC0.65□□□□□ -2.31
SIX4Q9UIU6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.64□□□□□ -2.31
SIX4Q9UIU6 RNU6-571P-201ENST00000384128 107 ntBASIC0.64□□□□□ -2.31
SIX4Q9UIU6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.64□□□□□ -2.31
SIX4Q9UIU6 MIR3678-201ENST00000578455 94 ntBASIC0.64□□□□□ -2.31
SIX4Q9UIU6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
SIX4Q9UIU6 RNU6-170P-201ENST00000362832 104 ntBASIC0.63□□□□□ -2.31
SIX4Q9UIU6 Y_RNA.508-201ENST00000384502 114 ntBASIC0.63□□□□□ -2.31
SIX4Q9UIU6 Y_RNA.659-201ENST00000515994 113 ntBASIC0.63□□□□□ -2.31
SIX4Q9UIU6 AC096720.1-201ENST00000604441 183 ntBASIC0.63□□□□□ -2.31
SIX4Q9UIU6 RNU6-90P-201ENST00000606352 106 ntBASIC0.63□□□□□ -2.31
SIX4Q9UIU6 AC091304.10-201ENST00000641554 121 ntBASIC0.63□□□□□ -2.31
SIX4Q9UIU6 SNORA63.4-201ENST00000362763 126 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 Y_RNA.173-201ENST00000363776 113 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 RNU6-1163P-201ENST00000364516 107 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 RNU4-45P-201ENST00000365469 141 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 RNU6-42P-201ENST00000384165 107 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 MIR635-201ENST00000384830 98 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 SNORD63B-201ENST00000411005 70 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.62□□□□□ -2.31
SIX4Q9UIU6 RNU6-919P-201ENST00000516731 104 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 RNU7-10P-201ENST00000607194 63 ntBASIC0.62□□□□□ -2.31
SIX4Q9UIU6 SNORD18A-201ENST00000363753 72 ntBASIC0.61□□□□□ -2.31
SIX4Q9UIU6 RNU4-36P-201ENST00000364294 144 ntBASIC0.61□□□□□ -2.31
SIX4Q9UIU6 MIR1302-5-201ENST00000408164 150 ntBASIC0.61□□□□□ -2.31
SIX4Q9UIU6 RNU7-106P-201ENST00000459514 67 ntBASIC0.61□□□□□ -2.31
SIX4Q9UIU6 RNU6-904P-201ENST00000516206 101 ntBASIC0.61□□□□□ -2.31
SIX4Q9UIU6 RNU6-469P-201ENST00000516253 101 ntBASIC0.61□□□□□ -2.31
SIX4Q9UIU6 AC138869.1-201ENST00000568623 124 ntBASIC0.61□□□□□ -2.31
SIX4Q9UIU6 MIR6734-201ENST00000621166 68 ntBASIC0.61□□□□□ -2.31
SIX4Q9UIU6 Y_RNA.342-201ENST00000365352 113 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 MIR516A2-201ENST00000384888 90 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 MIR516A1-201ENST00000385033 90 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 AL035461.1-201ENST00000421490 332 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 AC109327.2-201ENST00000448339 378 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 AC244505.6-201ENST00000452829 130 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 RNU7-195P-201ENST00000458793 62 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 MIR548Z-201ENST00000584743 97 ntBASIC0.6□□□□□ -2.31
SIX4Q9UIU6 Y_RNA.78-201ENST00000362970 110 ntBASIC0.59□□□□□ -2.31
SIX4Q9UIU6 RNU6-44P-201ENST00000384045 107 ntBASIC0.59□□□□□ -2.31
SIX4Q9UIU6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.59□□□□□ -2.31
SIX4Q9UIU6 MIR590-201ENST00000385008 97 ntBASIC0.59□□□□□ -2.31
SIX4Q9UIU6 MIR599-201ENST00000385069 95 ntBASIC0.59□□□□□ -2.31
SIX4Q9UIU6 AC097635.1-201ENST00000450678 155 ntBASIC0.59□□□□□ -2.31
SIX4Q9UIU6 RNU6-795P-201ENST00000516323 103 ntBASIC0.59□□□□□ -2.31
SIX4Q9UIU6 RNU6-537P-201ENST00000517277 103 ntBASIC0.59□□□□□ -2.31
SIX4Q9UIU6 MIR450A1-201ENST00000362262 91 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 Y_RNA.57-201ENST00000362806 113 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 SNORD115-24-201ENST00000363528 82 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 RNU6-1244P-201ENST00000363614 108 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 SNORD45B-201ENST00000364617 72 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 RNU6-756P-201ENST00000383997 107 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 SNORA51.5-201ENST00000384126 131 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 MIR519A1-201ENST00000385257 85 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 Y_RNA.601-201ENST00000410500 113 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 RNU6-135P-201ENST00000516769 101 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 AC012531.4-201ENST00000616509 177 ntBASIC0.58□□□□□ -2.32
SIX4Q9UIU6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SIX4Q9UIU6 Y_RNA.10-201ENST00000362371 110 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 Y_RNA.95-201ENST00000363079 95 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 SNORA36.1-201ENST00000363424 132 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 RNU6-755P-201ENST00000364400 103 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 SNORD28-201ENST00000384706 75 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.57□□□□□ -2.32
SIX4Q9UIU6 Y_RNA.809-201ENST00000516058 95 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 RNU6-109P-201ENST00000516364 107 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 RNU6-184P-201ENST00000516514 107 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 MIR4777-201ENST00000583710 86 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 MIR4639-201ENST00000584938 69 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 RNU6-86P-201ENST00000606534 107 ntBASIC0.57□□□□□ -2.32
SIX4Q9UIU6 RNU6-766P-201ENST00000362478 107 ntBASIC0.56□□□□□ -2.32
SIX4Q9UIU6 Y_RNA.221-201ENST00000364248 96 ntBASIC0.56□□□□□ -2.32
SIX4Q9UIU6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.56□□□□□ -2.32
SIX4Q9UIU6 Y_RNA.467-201ENST00000384297 102 ntBASIC0.56□□□□□ -2.32
SIX4Q9UIU6 AL031737.1-201ENST00000450125 223 ntBASIC0.56□□□□□ -2.32
SIX4Q9UIU6 snoU13.18-201ENST00000459483 104 ntBASIC0.56□□□□□ -2.32
SIX4Q9UIU6 SCARNA23-201ENST00000516060 130 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms