Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 Y_RNA.323-201ENST00000365157 109 ntBASIC0.52□□□□□ -2.33
LIMA1Q9UHB6 AC092628.1-201ENST00000436250 252 ntBASIC0.52□□□□□ -2.33
LIMA1Q9UHB6 RNA5SP94-201ENST00000516917 108 ntBASIC0.52□□□□□ -2.33
LIMA1Q9UHB6 MIR6515-201ENST00000619843 57 ntBASIC0.52□□□□□ -2.33
LIMA1Q9UHB6 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
LIMA1Q9UHB6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.52□□□□□ -2.33
LIMA1Q9UHB6 AL512310.12-203ENST00000640543 90 ntBASIC0.52□□□□□ -2.33
LIMA1Q9UHB6 SNORA36.1-201ENST00000363424 132 ntBASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 RNU6-1107P-201ENST00000364817 104 ntBASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 Y_RNA.377-201ENST00000365644 108 ntBASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 RNU6-589P-201ENST00000516485 107 ntBASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 RNU6-850P-201ENST00000516934 103 ntBASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 MIR4694-201ENST00000578534 80 ntBASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 AL442128.1-201ENST00000615151 90 ntBASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.51□□□□□ -2.33
LIMA1Q9UHB6 SNORD38.1-201ENST00000363863 68 ntBASIC0.5□□□□□ -2.33
LIMA1Q9UHB6 RNU6-571P-201ENST00000384128 107 ntBASIC0.5□□□□□ -2.33
LIMA1Q9UHB6 AC244505.6-201ENST00000452829 130 ntBASIC0.5□□□□□ -2.33
LIMA1Q9UHB6 MIR548H5-201ENST00000580314 60 ntBASIC0.5□□□□□ -2.33
LIMA1Q9UHB6 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 RNU6-832P-201ENST00000363319 107 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 Y_RNA.273-201ENST00000364703 102 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 RNU6-1014P-201ENST00000383940 103 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 RNU6-1056P-201ENST00000383996 107 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 MIR489-201ENST00000384923 84 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 MIR548I2-201ENST00000408348 149 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 MIR548G-201ENST00000408442 89 ntBASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.49□□□□□ -2.33
LIMA1Q9UHB6 Y_RNA.49-201ENST00000362714 112 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 RNU6-170P-201ENST00000362832 104 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 RNY3P2-201ENST00000362918 102 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 RNU6-1290P-201ENST00000362957 109 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 Y_RNA.173-201ENST00000363776 113 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 RNA5SP517-201ENST00000364724 117 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 SNORD28-201ENST00000384706 75 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 MIR598-201ENST00000384868 97 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 MIR519A1-201ENST00000385257 85 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 SNORA19.1-201ENST00000410656 129 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 SNORD63B-201ENST00000411005 70 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 RNU7-106P-201ENST00000459514 67 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 RNU6-469P-201ENST00000516253 101 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 RNA5SP47-201ENST00000517230 109 ntBASIC0.48□□□□□ -2.33
LIMA1Q9UHB6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 Y_RNA.36-201ENST00000362602 112 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 RNU6-1163P-201ENST00000364516 107 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 SNORD38.2-201ENST00000384470 69 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 RNU6-1081P-201ENST00000384537 107 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 MIR635-201ENST00000384830 98 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 AC097635.1-201ENST00000450678 155 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 RNU7-195P-201ENST00000458793 62 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 Y_RNA.709-201ENST00000516952 92 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 AC138869.1-201ENST00000568623 124 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 MIR4639-201ENST00000584938 69 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 AC091304.10-201ENST00000641554 121 ntBASIC0.47□□□□□ -2.33
LIMA1Q9UHB6 Y_RNA.342-201ENST00000365352 113 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 SNORA8.2-201ENST00000384372 139 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 Y_RNA.629-201ENST00000411368 105 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 SPINT5P-201ENST00000448174 155 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 RNU6-412P-201ENST00000516434 106 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 RNU6-135P-201ENST00000516769 101 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 RNU7-161P-201ENST00000517289 62 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 MTND5P40-201ENST00000559945 246 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 RNU7-10P-201ENST00000607194 63 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 AC244669.1-204ENST00000621564 178 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 MIR6828-201ENST00000636181 60 ntBASIC0.46□□□□□ -2.34
LIMA1Q9UHB6 SNORD115-24-201ENST00000363528 82 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 Y_RNA.291-201ENST00000364886 113 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 RNU6-106P-201ENST00000384405 107 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 MIR516A2-201ENST00000384888 90 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 MIR516A1-201ENST00000385033 90 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 MIR599-201ENST00000385069 95 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 RNU6-554P-201ENST00000410466 106 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 SNORA40.8-201ENST00000411034 126 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 RNA5SP480-201ENST00000516840 109 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 RNU6-90P-201ENST00000606352 106 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.45□□□□□ -2.34
LIMA1Q9UHB6 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 RNA5SP403-201ENST00000363598 108 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 Y_RNA.163-201ENST00000363702 113 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 RNU6-1325P-201ENST00000364905 105 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 RNY4P18-201ENST00000391107 89 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 RNU6-537P-201ENST00000517277 103 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 AC141557.1-201ENST00000540982 400 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 SNORA25.18-201ENST00000607153 114 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms