Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 Y_RNA.93-201ENST00000363066 109 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.168-201ENST00000363740 102 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 RNU4-36P-201ENST00000364294 144 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 RNU6-865P-201ENST00000364772 107 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 RNU6-1113P-201ENST00000384348 107 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 RNU6-592P-201ENST00000411333 103 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 RNU6-1018P-201ENST00000516577 106 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 RNU6-531P-201ENST00000516694 104 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 RNU6-844P-201ENST00000517175 102 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 MIR4491-201ENST00000581087 68 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 AL353765.1-201ENST00000605514 183 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 AC025521.1-201ENST00000621624 286 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.73-201ENST00000362910 113 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.119-201ENST00000363301 96 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 RNU6-1244P-201ENST00000363614 108 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 MT-TN-201ENST00000387400 73 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 MIR548G-201ENST00000408442 89 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 SPINT5P-201ENST00000448174 155 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 U7.7-201ENST00000459276 60 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 RNU6-158P-201ENST00000517104 100 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 AC008608.1-201ENST00000603910 127 ntBASIC0.73□□□□□ -2.29
CLIP2Q9UDT6 MIR377-201ENST00000362145 69 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.173-201ENST00000363776 113 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 SNORD38.1-201ENST00000363863 68 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 MIR181B2-201ENST00000385004 89 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 RPS26P5-201ENST00000418544 335 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 RNU7-185P-201ENST00000459215 60 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 AC026421.1-201ENST00000519101 163 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 MIR4771-2-201ENST00000577758 74 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 MIR4500-201ENST00000579472 76 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 MIR4771-1-201ENST00000582617 74 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 AC006254.2-201ENST00000603259 279 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 MIR8066-201ENST00000617280 78 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 MIR6513-201ENST00000621188 64 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 AP001362.1-201ENST00000625165 124 ntBASIC0.72□□□□□ -2.29
CLIP2Q9UDT6 MIR494-201ENST00000349529 81 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 Y_RNA.13-201ENST00000362403 112 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 RNU6-403P-201ENST00000363163 104 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 SNORD115-27-201ENST00000364430 82 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 SNORA72.6-201ENST00000384520 129 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 SNORD93-201ENST00000408813 74 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 RNY4P29-201ENST00000410801 97 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 AL161932.1-201ENST00000437408 146 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 SNRPGP12-201ENST00000449481 213 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 RNU7-106P-201ENST00000459514 67 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 AL513043.2-201ENST00000573941 143 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 AC025627.3-201ENST00000582078 182 ntBASIC0.71□□□□□ -2.3
CLIP2Q9UDT6 Y_RNA.17-201ENST00000362433 111 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 Y_RNA.98-201ENST00000363109 102 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNA5SP245-201ENST00000364239 121 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 SNORD45B-201ENST00000364617 72 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 SNORD113.3-201ENST00000364630 78 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNU6-934P-201ENST00000365154 107 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNU6-813P-201ENST00000384691 107 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNU6-402P-201ENST00000410678 103 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNU6-850P-201ENST00000516934 103 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.7□□□□□ -2.3
CLIP2Q9UDT6 RNA5SP499-201ENST00000363982 119 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 RNU6-219P-201ENST00000364728 107 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 SNORD58A-201ENST00000383875 65 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 RNU6-573P-201ENST00000383938 106 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 MIR516A2-201ENST00000384888 90 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 MIR516A1-201ENST00000385033 90 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 RNU6-887P-201ENST00000410660 100 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 TRAJ51-201ENST00000504127 63 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 MTND5P40-201ENST00000559945 246 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 MIR4676-201ENST00000583078 72 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 RNU6-90P-201ENST00000606352 106 ntBASIC0.69□□□□□ -2.3
CLIP2Q9UDT6 Y_RNA.42-201ENST00000362660 108 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 Y_RNA.220-201ENST00000364244 109 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 RNU6-1134P-201ENST00000365156 101 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 RNY1P4-201ENST00000384595 115 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 MT-TF-201ENST00000387314 71 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 MIR936-201ENST00000401264 98 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 AC098934.3-201ENST00000430450 190 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 RNU7-85P-201ENST00000458851 63 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 snoU13.11-201ENST00000459219 104 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 Y_RNA.705-201ENST00000516862 110 ntBASIC0.68□□□□□ -2.3
CLIP2Q9UDT6 Y_RNA.10-201ENST00000362371 110 ntBASIC0.67□□□□□ -2.3
CLIP2Q9UDT6 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
CLIP2Q9UDT6 RNA5SP173-201ENST00000364857 136 ntBASIC0.67□□□□□ -2.3
CLIP2Q9UDT6 MIR1257-201ENST00000408490 117 ntBASIC0.67□□□□□ -2.3
CLIP2Q9UDT6 RNU6-447P-201ENST00000410293 104 ntBASIC0.67□□□□□ -2.3
CLIP2Q9UDT6 RNU6-1118P-201ENST00000410382 104 ntBASIC0.67□□□□□ -2.3
CLIP2Q9UDT6 RNU6-1076P-201ENST00000410397 104 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 2208.9 ms