Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.433-201ENST00000384089 102 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 MIR938-201ENST00000401216 83 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 FABP5P4-201ENST00000437203 171 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 SPINT5P-201ENST00000448174 155 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 AC109327.2-201ENST00000448339 378 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 RNU6-795P-201ENST00000516323 103 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.681-201ENST00000516445 113 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 RNU6-531P-201ENST00000516694 104 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 SNORA25.16-201ENST00000516741 121 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 RNU7-156P-201ENST00000517214 74 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 MTND5P40-201ENST00000559945 246 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 MIR1273G-201ENST00000577677 100 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 MIR4804-201ENST00000581683 73 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 MIR6767-201ENST00000637302 66 ntBASIC1.1□□□□□ -2.23
DKK3Q9UBP4 RNU6-1298P-201ENST00000362456 101 ntBASIC1.09□□□□□ -2.23
DKK3Q9UBP4 RNU6-403P-201ENST00000363163 104 ntBASIC1.09□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.09□□□□□ -2.23
DKK3Q9UBP4 RNU7-56P-201ENST00000458744 62 ntBASIC1.09□□□□□ -2.23
DKK3Q9UBP4 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
DKK3Q9UBP4 AL136317.1-201ENST00000612653 226 ntBASIC1.09□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.08□□□□□ -2.24
DKK3Q9UBP4 RNU6-813P-201ENST00000384691 107 ntBASIC1.08□□□□□ -2.24
DKK3Q9UBP4 AC015818.7-201ENST00000428754 109 ntBASIC1.08□□□□□ -2.24
DKK3Q9UBP4 AC087499.7-201ENST00000441958 109 ntBASIC1.08□□□□□ -2.24
DKK3Q9UBP4 U7.7-201ENST00000459276 60 ntBASIC1.08□□□□□ -2.24
DKK3Q9UBP4 RNU6-977P-201ENST00000516411 103 ntBASIC1.08□□□□□ -2.24
DKK3Q9UBP4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.08□□□□□ -2.24
DKK3Q9UBP4 Y_RNA.705-201ENST00000516862 110 ntBASIC1.08□□□□□ -2.24
DKK3Q9UBP4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.07□□□□□ -2.24
DKK3Q9UBP4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
DKK3Q9UBP4 RNU6-364P-201ENST00000384387 107 ntBASIC1.07□□□□□ -2.24
DKK3Q9UBP4 SNORA72.6-201ENST00000384520 129 ntBASIC1.07□□□□□ -2.24
DKK3Q9UBP4 MIR100-201ENST00000385259 80 ntBASIC1.07□□□□□ -2.24
DKK3Q9UBP4 RNU6-972P-201ENST00000391208 107 ntBASIC1.07□□□□□ -2.24
DKK3Q9UBP4 MIR548Z-201ENST00000584743 97 ntBASIC1.07□□□□□ -2.24
DKK3Q9UBP4 AL590095.2-201ENST00000604136 117 ntBASIC1.07□□□□□ -2.24
DKK3Q9UBP4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
DKK3Q9UBP4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
DKK3Q9UBP4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 RNU6-1125P-201ENST00000363601 107 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 Y_RNA.467-201ENST00000384297 102 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 RNU6-480P-201ENST00000384332 107 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 RNU6-850P-201ENST00000516934 103 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 RNA5SP170-201ENST00000517150 101 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 AP003327.1-201ENST00000529684 127 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 AC211469.2-201ENST00000605461 205 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 RNU6-86P-201ENST00000606534 107 ntBASIC1.06□□□□□ -2.24
DKK3Q9UBP4 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
DKK3Q9UBP4 RNU6-644P-201ENST00000391155 98 ntBASIC1.05□□□□□ -2.24
DKK3Q9UBP4 RNU7-102P-201ENST00000458948 62 ntBASIC1.05□□□□□ -2.24
DKK3Q9UBP4 AC013244.2-201ENST00000603396 103 ntBASIC1.05□□□□□ -2.24
DKK3Q9UBP4 RNU7-10P-201ENST00000607194 63 ntBASIC1.05□□□□□ -2.24
DKK3Q9UBP4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
DKK3Q9UBP4 Y_RNA.115-201ENST00000363272 98 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 Y_RNA.342-201ENST00000365352 113 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 RNU1-119P-201ENST00000391122 165 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 RNU6-887P-201ENST00000410660 100 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 BX276092.1-201ENST00000427368 251 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 RNU7-61P-201ENST00000515897 61 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 MIR548H5-201ENST00000580314 60 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
DKK3Q9UBP4 MIR101-2-201ENST00000362195 79 ntBASIC1.03□□□□□ -2.24
DKK3Q9UBP4 Y_RNA.369-201ENST00000365568 117 ntBASIC1.03□□□□□ -2.24
DKK3Q9UBP4 MIR520F-201ENST00000384824 87 ntBASIC1.03□□□□□ -2.24
DKK3Q9UBP4 SNORD100-201ENST00000408573 76 ntBASIC1.03□□□□□ -2.24
DKK3Q9UBP4 SNORD124-201ENST00000459577 104 ntBASIC1.03□□□□□ -2.24
DKK3Q9UBP4 MALAT1.1-201ENST00000618249 95 ntBASIC1.03□□□□□ -2.24
DKK3Q9UBP4 Y_RNA.43-201ENST00000362670 111 ntBASIC1.02□□□□□ -2.25
DKK3Q9UBP4 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
DKK3Q9UBP4 MIR519A1-201ENST00000385257 85 ntBASIC1.02□□□□□ -2.25
DKK3Q9UBP4 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
DKK3Q9UBP4 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
DKK3Q9UBP4 RNA5SP395-201ENST00000516567 118 ntBASIC1.02□□□□□ -2.25
DKK3Q9UBP4 AC025627.3-201ENST00000582078 182 ntBASIC1.02□□□□□ -2.25
DKK3Q9UBP4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.02□□□□□ -2.25
DKK3Q9UBP4 MIR488-201ENST00000365739 83 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 SNORD58A-201ENST00000383875 65 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 MIR635-201ENST00000384830 98 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 SNORD89-201ENST00000390981 114 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 MIR942-201ENST00000401111 86 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 RNU6-448P-201ENST00000517052 107 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 CYP3A137P-201ENST00000562436 69 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 AC103810.7-201ENST00000607821 91 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 U7.3-201ENST00000616123 62 ntBASIC1.01□□□□□ -2.25
DKK3Q9UBP4 SNORD116-10-201ENST00000363791 102 ntBASIC1□□□□□ -2.25
DKK3Q9UBP4 Y_RNA.220-201ENST00000364244 109 ntBASIC1□□□□□ -2.25
DKK3Q9UBP4 Y_RNA.290-201ENST00000364879 114 ntBASIC1□□□□□ -2.25
DKK3Q9UBP4 MIR181B2-201ENST00000385004 89 ntBASIC1□□□□□ -2.25
DKK3Q9UBP4 SNORD105-201ENST00000386910 85 ntBASIC1□□□□□ -2.25
DKK3Q9UBP4 RNY4P30-201ENST00000410216 95 ntBASIC1□□□□□ -2.25
DKK3Q9UBP4 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
DKK3Q9UBP4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms