Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 Y_RNA.119-201ENST00000363301 96 ntBASIC1.99□□□□□ -2.09
LMCD1Q9NZU5 RNU6-957P-201ENST00000363652 99 ntBASIC1.99□□□□□ -2.09
LMCD1Q9NZU5 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
LMCD1Q9NZU5 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
LMCD1Q9NZU5 RNU7-106P-201ENST00000459514 67 ntBASIC1.99□□□□□ -2.09
LMCD1Q9NZU5 AL096861.1-201ENST00000610899 123 ntBASIC1.99□□□□□ -2.09
LMCD1Q9NZU5 RNA5SP48-201ENST00000363969 126 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 MIR563-201ENST00000385080 79 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 RNU6-243P-201ENST00000391140 107 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 RNU6-466P-201ENST00000391224 103 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 MIR3122-201ENST00000577243 73 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 MIR4287-201ENST00000579398 78 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 MIR6740-201ENST00000618268 113 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 AC103706.3-201ENST00000636297 85 ntBASIC1.98□□□□□ -2.09
LMCD1Q9NZU5 Y_RNA.207-201ENST00000364142 106 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 SNORD115-22-201ENST00000364456 82 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 RNU6-396P-201ENST00000365369 105 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 RNU6-1051P-201ENST00000365471 102 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 MIR1302-7-201ENST00000408841 72 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 AL161935.2-201ENST00000414627 60 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 JTBP1-201ENST00000441314 247 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 RNU6-881P-201ENST00000516813 102 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
LMCD1Q9NZU5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LMCD1Q9NZU5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LMCD1Q9NZU5 Y_RNA.371-201ENST00000365591 113 ntBASIC1.96□□□□□ -2.1
LMCD1Q9NZU5 MIR3675-201ENST00000583661 73 ntBASIC1.96□□□□□ -2.1
LMCD1Q9NZU5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LMCD1Q9NZU5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
LMCD1Q9NZU5 RNU6-895P-201ENST00000384125 103 ntBASIC1.95□□□□□ -2.1
LMCD1Q9NZU5 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
LMCD1Q9NZU5 AC003989.2-201ENST00000440224 169 ntBASIC1.95□□□□□ -2.1
LMCD1Q9NZU5 MIR4303-201ENST00000581299 66 ntBASIC1.95□□□□□ -2.1
LMCD1Q9NZU5 SNORA4-201ENST00000584302 138 ntBASIC1.95□□□□□ -2.1
LMCD1Q9NZU5 MIR502-201ENST00000606349 86 ntBASIC1.95□□□□□ -2.1
LMCD1Q9NZU5 MIR6504-201ENST00000613520 61 ntBASIC1.95□□□□□ -2.1
LMCD1Q9NZU5 ZNF209P-201ENST00000593450 2304 ntBASIC1.95□□□□□ -2.1
LMCD1Q9NZU5 RNU6-829P-201ENST00000363700 112 ntBASIC1.94□□□□□ -2.1
LMCD1Q9NZU5 MIR1276-201ENST00000408707 83 ntBASIC1.94□□□□□ -2.1
LMCD1Q9NZU5 Y_RNA.606-201ENST00000410579 103 ntBASIC1.94□□□□□ -2.1
LMCD1Q9NZU5 RNU7-95P-201ENST00000459222 64 ntBASIC1.94□□□□□ -2.1
LMCD1Q9NZU5 BX248123.2-201ENST00000606318 124 ntBASIC1.94□□□□□ -2.1
LMCD1Q9NZU5 AL109933.3-201ENST00000619095 188 ntBASIC1.94□□□□□ -2.1
LMCD1Q9NZU5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LMCD1Q9NZU5 MIR30D-201ENST00000362283 70 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 Y_RNA.236-201ENST00000364427 111 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 RNU6-392P-201ENST00000364926 101 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 RNU6-1165P-201ENST00000410119 107 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 SNORD63B-201ENST00000411005 70 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 AL606490.4-201ENST00000423117 127 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 snoU13.25-201ENST00000458945 104 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 RNU6-1194P-201ENST00000516208 104 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 uc_338.6-201ENST00000613544 171 ntBASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.93□□□□□ -2.1
LMCD1Q9NZU5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 SNORD113.1-201ENST00000363280 73 ntBASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 SNORA24B-201ENST00000384176 131 ntBASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 RNU7-62P-201ENST00000458856 62 ntBASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 RNU11-2P-201ENST00000516898 142 ntBASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 MIR3140-201ENST00000583685 90 ntBASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 U6.81-201ENST00000612550 106 ntBASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 MIR8053-201ENST00000613344 75 ntBASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
LMCD1Q9NZU5 RNU6-1216P-201ENST00000362590 107 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 SNORD45.1-201ENST00000363181 77 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 SNORA40.6-201ENST00000391153 128 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 MIR4713-201ENST00000582691 75 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 MIR4264-201ENST00000583520 66 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 MIR6516-201ENST00000630554 81 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
LMCD1Q9NZU5 RNU6-824P-201ENST00000363724 104 ntBASIC1.9□□□□□ -2.11
LMCD1Q9NZU5 RNU6-604P-201ENST00000390917 100 ntBASIC1.9□□□□□ -2.11
LMCD1Q9NZU5 RNA5SP95-201ENST00000410319 137 ntBASIC1.9□□□□□ -2.11
LMCD1Q9NZU5 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
LMCD1Q9NZU5 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
LMCD1Q9NZU5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.9□□□□□ -2.11
LMCD1Q9NZU5 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.9□□□□□ -2.11
LMCD1Q9NZU5 RNU6-1187P-201ENST00000364771 110 ntBASIC1.89□□□□□ -2.11
LMCD1Q9NZU5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.89□□□□□ -2.11
LMCD1Q9NZU5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LMCD1Q9NZU5 MIR2115-201ENST00000516657 100 ntBASIC1.89□□□□□ -2.11
LMCD1Q9NZU5 RNU6-531P-201ENST00000516694 104 ntBASIC1.89□□□□□ -2.11
LMCD1Q9NZU5 AC015688.6-201ENST00000577737 104 ntBASIC1.89□□□□□ -2.11
LMCD1Q9NZU5 SNORA77B-201ENST00000578179 125 ntBASIC1.89□□□□□ -2.11
LMCD1Q9NZU5 TRDV1-202ENST00000621643 102 ntBASIC1.89□□□□□ -2.11
LMCD1Q9NZU5 RNU6-654P-201ENST00000364373 107 ntBASIC1.88□□□□□ -2.11
LMCD1Q9NZU5 SNORA25.16-201ENST00000516741 121 ntBASIC1.88□□□□□ -2.11
LMCD1Q9NZU5 U6.100-201ENST00000636230 99 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 234.4 ms