Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SNORD58A-201ENST00000383875 65 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-571P-201ENST00000384128 107 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 SNORD93-201ENST00000408813 74 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 RPS26P5-201ENST00000418544 335 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-1194P-201ENST00000516208 104 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 AC026421.1-201ENST00000519101 163 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR4500-201ENST00000579472 76 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 AC022709.1-201ENST00000615967 87 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 U6.109-201ENST00000636749 87 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU4-58P-201ENST00000363192 141 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 Y_RNA.119-201ENST00000363301 96 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-1244P-201ENST00000363614 108 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 RNY1P7-201ENST00000384743 110 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR1257-201ENST00000408490 117 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR548J-201ENST00000408833 112 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 SNRPGP12-201ENST00000449481 213 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 AC090897.1-201ENST00000580909 226 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR4491-201ENST00000581087 68 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR1827-201ENST00000408549 66 ntBASIC0.98□□□□□ -2.25
NCKIPSDQ9NZQ3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
NCKIPSDQ9NZQ3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.98□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR4676-201ENST00000583078 72 ntBASIC0.98□□□□□ -2.25
NCKIPSDQ9NZQ3 AC103810.7-201ENST00000607821 91 ntBASIC0.98□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR8066-201ENST00000617280 78 ntBASIC0.98□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR125B2-201ENST00000385128 89 ntBASIC0.97□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-162P-201ENST00000516228 103 ntBASIC0.97□□□□□ -2.25
NCKIPSDQ9NZQ3 SNORA25.16-201ENST00000516741 121 ntBASIC0.97□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
NCKIPSDQ9NZQ3 SNORD73B-201ENST00000364394 72 ntBASIC0.96□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-1134P-201ENST00000365156 101 ntBASIC0.96□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
NCKIPSDQ9NZQ3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR450A2-201ENST00000385022 100 ntBASIC0.96□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-765P-201ENST00000516916 99 ntBASIC0.96□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR4804-201ENST00000581683 73 ntBASIC0.96□□□□□ -2.26
NCKIPSDQ9NZQ3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-403P-201ENST00000363163 104 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-820P-201ENST00000384273 107 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 SNORD116-22-201ENST00000384430 92 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR181B2-201ENST00000385004 89 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 SNORD89-201ENST00000390981 114 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU4-83P-201ENST00000410863 133 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-531P-201ENST00000516694 104 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-850P-201ENST00000516934 103 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 AC008608.1-201ENST00000603910 127 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU7-10P-201ENST00000607194 63 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 AL136317.1-201ENST00000612653 226 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR6082-201ENST00000613604 109 ntBASIC0.95□□□□□ -2.26
NCKIPSDQ9NZQ3 Y_RNA.13-201ENST00000362403 112 ntBASIC0.94□□□□□ -2.26
NCKIPSDQ9NZQ3 Y_RNA.190-201ENST00000363964 101 ntBASIC0.94□□□□□ -2.26
NCKIPSDQ9NZQ3 SNORA72.6-201ENST00000384520 129 ntBASIC0.94□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR100-201ENST00000385259 80 ntBASIC0.94□□□□□ -2.26
NCKIPSDQ9NZQ3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.94□□□□□ -2.26
NCKIPSDQ9NZQ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR1-1-201ENST00000362147 71 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR101-2-201ENST00000362195 79 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 Y_RNA.57-201ENST00000362806 113 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR598-201ENST00000384868 97 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 SNORA26.2-201ENST00000390922 122 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 BX276092.1-201ENST00000427368 251 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 U7.7-201ENST00000459276 60 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 RNA5SP255-201ENST00000516370 107 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 AL513043.2-201ENST00000573941 143 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR548H5-201ENST00000580314 60 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 SNORD92-201ENST00000585078 85 ntBASIC0.93□□□□□ -2.26
NCKIPSDQ9NZQ3 Y_RNA.17-201ENST00000362433 111 ntBASIC0.92□□□□□ -2.26
NCKIPSDQ9NZQ3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.92□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR938-201ENST00000401216 83 ntBASIC0.92□□□□□ -2.26
NCKIPSDQ9NZQ3 RNY4P29-201ENST00000410801 97 ntBASIC0.92□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU7-56P-201ENST00000458744 62 ntBASIC0.92□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.92□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU7-156P-201ENST00000517214 74 ntBASIC0.92□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-675P-201ENST00000384236 104 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-364P-201ENST00000384387 107 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR520F-201ENST00000384824 87 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR635-201ENST00000384830 98 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 AL161932.1-201ENST00000437408 146 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU7-102P-201ENST00000458948 62 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-977P-201ENST00000516411 103 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 RNU6-762P-201ENST00000517107 102 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR5000-201ENST00000577717 103 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 IGLL4P-201ENST00000614590 133 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 AC025521.1-201ENST00000621624 286 ntBASIC0.91□□□□□ -2.26
NCKIPSDQ9NZQ3 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
NCKIPSDQ9NZQ3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.9□□□□□ -2.27
NCKIPSDQ9NZQ3 MIR519A1-201ENST00000385257 85 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms