Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 Y_RNA.544-201ENST00000384650 113 ntBASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 RNU4-83P-201ENST00000410863 133 ntBASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 MTATP8P2-201ENST00000435212 202 ntBASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 RNU7-56P-201ENST00000458744 62 ntBASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 RNU6-531P-201ENST00000516694 104 ntBASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 AC008608.1-201ENST00000603910 127 ntBASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 MIR6082-201ENST00000613604 109 ntBASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.83□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.10-201ENST00000362371 110 ntBASIC0.82□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.82□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.93-201ENST00000363066 109 ntBASIC0.82□□□□□ -2.28
DDX43Q9NXZ2 MIR548G-201ENST00000408442 89 ntBASIC0.82□□□□□ -2.28
DDX43Q9NXZ2 AC109327.2-201ENST00000448339 378 ntBASIC0.82□□□□□ -2.28
DDX43Q9NXZ2 RNU6-1194P-201ENST00000516208 104 ntBASIC0.82□□□□□ -2.28
DDX43Q9NXZ2 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
DDX43Q9NXZ2 MIR6779-201ENST00000617283 64 ntBASIC0.82□□□□□ -2.28
DDX43Q9NXZ2 RNU6-403P-201ENST00000363163 104 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.467-201ENST00000384297 102 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 RNU6-994P-201ENST00000410507 111 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 RNU6-765P-201ENST00000516916 99 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 RNU7-156P-201ENST00000517214 74 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 MIR4439-201ENST00000583746 80 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.107-201ENST00000363190 121 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 RNU6-1244P-201ENST00000363614 108 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 SNORD45B-201ENST00000364617 72 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 MIR488-201ENST00000365739 83 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 MIR938-201ENST00000401216 83 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 RNU7-102P-201ENST00000458948 62 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 U7.7-201ENST00000459276 60 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.659-201ENST00000515994 113 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 RNA5SP436-201ENST00000516020 115 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.677-201ENST00000516401 85 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 RNU6-1110P-201ENST00000516462 101 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 MIR4500-201ENST00000579472 76 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 AC096720.1-201ENST00000604441 183 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 RNU6-90P-201ENST00000606352 106 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.8□□□□□ -2.28
DDX43Q9NXZ2 MIR1-1-201ENST00000362147 71 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 RNU4-58P-201ENST00000363192 141 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 RNU6-571P-201ENST00000384128 107 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 RNU6-644P-201ENST00000391155 98 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 BX276092.1-201ENST00000427368 251 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 AC067940.1-201ENST00000458411 300 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 AC025627.3-201ENST00000582078 182 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
DDX43Q9NXZ2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.342-201ENST00000365352 113 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 SNORD38.2-201ENST00000384470 69 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 SNORA72.6-201ENST00000384520 129 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 SNORD100-201ENST00000408573 76 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 RNU7-61P-201ENST00000515897 61 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 SNORA40.13-201ENST00000516379 120 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 RNU6-977P-201ENST00000516411 103 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 RNU6-850P-201ENST00000516934 103 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 RN7SL793P-201ENST00000583259 296 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 RNU6-86P-201ENST00000606534 107 ntBASIC0.78□□□□□ -2.28
DDX43Q9NXZ2 RNU6-813P-201ENST00000384691 107 ntBASIC0.77□□□□□ -2.29
DDX43Q9NXZ2 SNORD89-201ENST00000390981 114 ntBASIC0.77□□□□□ -2.29
DDX43Q9NXZ2 SPINT5P-201ENST00000448174 155 ntBASIC0.77□□□□□ -2.29
DDX43Q9NXZ2 AP003327.1-201ENST00000529684 127 ntBASIC0.77□□□□□ -2.29
DDX43Q9NXZ2 MIR4714-201ENST00000580728 77 ntBASIC0.77□□□□□ -2.29
DDX43Q9NXZ2 AL136317.1-201ENST00000612653 226 ntBASIC0.77□□□□□ -2.29
DDX43Q9NXZ2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.290-201ENST00000364879 114 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 RNU6-364P-201ENST00000384387 107 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 RNU6-291P-201ENST00000384720 107 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 MIR520F-201ENST00000384824 87 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 TRAJ51-201ENST00000504127 63 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 RNU6-448P-201ENST00000517052 107 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 MTND5P40-201ENST00000559945 246 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
DDX43Q9NXZ2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 RNA5SP245-201ENST00000364239 121 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 MIR181B2-201ENST00000385004 89 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 MIR519A1-201ENST00000385257 85 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 RNU1-119P-201ENST00000391122 165 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 RNU7-106P-201ENST00000459514 67 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.694-201ENST00000516677 117 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 AC103810.7-201ENST00000607821 91 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 U7.3-201ENST00000616123 62 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 MALAT1.1-201ENST00000618249 95 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 uc_338.16-201ENST00000621804 95 ntBASIC0.75□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.56-201ENST00000362798 112 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms